Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_3G014460 Cucumis sativus L. HOM05D004708 ORTHO05D005573 2.4e-93 345.5 179 100.0
MELO3C006648.2 Cucumis melo HOM05D004708 ORTHO05D005573 4.2e-85 318.2 179 93.3
ClCG05G006010 Citrullus lanatus HOM05D000319 ORTHO05D000903 9.6e-82 307.0 178 90.4
Thecc.03G010200 Theobroma cacao HOM05D004708 ORTHO05D005573 1.2e-68 263.5 169 78.1
Atru.chr3.607 Acer truncatum HOM05D004708 ORTHO05D005573 1.3e-67 260.0 168 78.0
Ciclev10026600m.g Citrus clementina HOM05D004708 ORTHO05D005573 1.3e-67 260.0 169 78.1
Gorai.008G067200 Gossypium raimondii HOM05D004708 ORTHO05D005573 1.8e-67 259.6 165 79.4
Cpa.g.sc6.137 Carica papaya HOM05D004708 ORTHO05D005573 2.3e-67 259.2 169 78.7
MD02G1144700 Malus domestica HOM05D004708 ORTHO05D005573 8.7e-67 257.3 169 76.9
COL.COLO4_22050 Corchorus olitorius HOM05D004708 ORTHO05D005573 1.1e-66 256.9 173 75.1
Manes.01G136850 Manihot esculenta HOM05D004708 ORTHO05D005573 1.1e-66 256.9 163 79.8
Thecc.01G032800 Theobroma cacao HOM05D004708 ORTHO05D005573 1.1e-66 256.9 173 76.9
CSS0040556 Camellia sinensis var. sinensis HOM05D004708 ORTHO05D005573 2.5e-66 255.8 168 77.4
QL06p046600 Quercus lobata HOM05D004708 ORTHO05D005573 3.3e-66 255.4 164 78.7
Lsat_1_v5_gn_4_148240 Lactuca sativa HOM05D004708 ORTHO05D005573 4.3e-66 255.0 157 84.1
Prupe.7G156900 Prunus persica HOM05D004708 ORTHO05D005573 5.6e-66 254.6 168 77.4
Potri.005G121200 Populus trichocarpa HOM05D004708 ORTHO05D005573 1.6e-65 253.1 169 75.7
HanXRQChr09g0261341 Helianthus annuus HOM05D004708 ORTHO05D005573 2.1e-65 252.7 157 82.2
Duzib084G0089 Durio zibethinus HOM05D004708 ORTHO05D005573 2.8e-65 252.3 169 76.3
Duzib264G1087 Durio zibethinus HOM05D004708 ORTHO05D005573 2.8e-65 252.3 169 75.7
COL.COLO4_34048 Corchorus olitorius HOM05D004708 ORTHO05D005573 3.7e-65 251.9 169 74.6
MD15G1258400 Malus domestica HOM05D004708 ORTHO05D005573 3.7e-65 251.9 169 75.1
TWI53G1618 Tripterygium wilfordii HOM05D004708 ORTHO05D005573 8.1e-65 250.8 171 74.3
CSS0030971 Camellia sinensis var. sinensis HOM05D004708 ORTHO05D005573 1.8e-64 249.6 168 73.8
GSVIVG01025946001 Vitis vinifera HOM05D004708 ORTHO05D005573 1.8e-64 249.6 167 76.6
PGR119G0658 Punica granatum HOM05D004708 ORTHO05D005573 3.1e-64 248.8 181 72.9
Carub.0003s3243 Capsella rubella HOM05D004708 ORTHO05D005573 4.0e-64 248.4 174 73.6
CARHR108820 Cardamine hirsuta HOM05D004708 ORTHO05D005573 4.0e-64 248.4 179 72.1
Manes.02G095600 Manihot esculenta HOM05D004708 ORTHO05D005573 4.0e-64 248.4 169 74.6
Actinidia19193 Actinidia chinensis HOM05D004708 ORTHO05D005573 5.3e-64 248.1 168 73.8
AL3G51520 Arabidopsis lyrata HOM05D004708 ORTHO05D005573 5.3e-64 248.1 178 72.5
AT2G18250 Arabidopsis thaliana HOM05D004708 ORTHO05D005573 5.3e-64 248.1 178 71.3
vmacro17822 Vaccinium macrocarpon HOM05D004708 ORTHO05D005573 9.0e-64 247.3 168 73.2
Aa31LG8G15760 Aethionema arabicum HOM05D004708 ORTHO05D005573 1.2e-63 246.9 167 74.9
ECA232G2192 Erigeron canadensis HOM05D004708 ORTHO05D005573 1.2e-63 246.9 174 75.9
Peaxi162Scf00008g03516 Petunia axillaris HOM05D004708 ORTHO05D005573 1.2e-63 246.9 169 76.3
Gohir.A09G170800 Gossypium hirsutum HOM05D004708 ORTHO05D005573 2.0e-63 246.1 168 73.8
Nitab4.5_0000136g0310 Nicotiana tabacum HOM05D004708 ORTHO05D005573 2.0e-63 246.1 168 73.8
Sp3g31670 Schrenkiella parvula HOM05D004708 ORTHO05D005573 2.0e-63 246.1 178 71.3
Gorai.006G188300 Gossypium raimondii HOM05D004708 ORTHO05D005573 2.6e-63 245.7 168 73.2
Solyc02g062640.4 Solanum lycopersicum HOM05D004708 ORTHO05D005573 2.6e-63 245.7 168 73.8
Sopen02g013670 Solanum pennellii HOM05D004708 ORTHO05D005573 3.4e-63 245.4 168 73.2
Thhalv10022875m.g Eutrema salsugineum HOM05D004708 ORTHO05D005573 4.5e-63 245.0 178 70.8
FvH4_1g13011 Fragaria vesca HOM05D004708 ORTHO05D005573 4.5e-63 245.0 170 72.4
Rhsim08G0118600 Rhododendron simsii HOM05D004708 ORTHO05D005573 5.8e-63 244.6 168 74.4
Hund16439 Selenicereus undatus HOM05D004708 ORTHO05D005573 5.8e-63 244.6 163 73.6
Dinv13509 Davidia involucrata HOM05D004708 ORTHO05D005573 7.6e-63 244.2 168 73.8
GSVIVG01018936001 Vitis vinifera HOM05D004708 ORTHO05D005573 1.0e-62 243.8 170 71.2
CiPaw.01G043700 Carya illinoinensis HOM05D004708 ORTHO05D005573 1.3e-62 243.4 169 74.0
MSTRG.23511 Avicennia marina HOM05D004708 ORTHO05D005573 2.9e-62 242.3 166 73.5
Cc07_g09720 Coffea canephora HOM05D004708 ORTHO05D005573 3.8e-62 241.9 168 74.4
EL10Ac6g15543 Beta vulgaris HOM05D004708 ORTHO05D005573 6.5e-62 241.1 169 72.8
CAN.G111.48 Capsicum annuum HOM05D004708 ORTHO05D005573 6.5e-62 241.1 166 73.5
Sc16g0002660 Simmondsia chinensis HOM05D004708 ORTHO05D005573 8.4e-62 240.7 166 72.9
BcaC06g36391 Brassica carinata HOM05D004708 ORTHO05D005573 1.4e-61 240.0 177 70.6
Hma1.2p1_0224F.1_g094553 Hydrangea macrophylla HOM05D004708 ORTHO05D005573 1.4e-61 240.0 168 72.0
BcaC04g22917 Brassica carinata HOM05D004708 ORTHO05D005573 1.9e-61 239.6 176 68.8
BcaB03g16615 Brassica carinata HOM05D004708 ORTHO05D005573 4.2e-61 238.4 177 70.6
BcaB07g31677 Brassica carinata HOM05D004708 ORTHO05D005573 4.2e-61 238.4 176 68.2
BolC9t54282H Brassica oleracea HOM05D004708 ORTHO05D005573 4.2e-61 238.4 176 68.2
A07p02450 Brassica napus HOM05D004708 ORTHO05D005573 7.1e-61 237.7 157 75.2
BraA07t28041Z Brassica rapa HOM05D004708 ORTHO05D005573 7.1e-61 237.7 157 75.2
PGSC0003DMG400015508 Solanum tuberosum HOM05D004708 ORTHO05D005573 7.1e-61 237.7 164 72.6
MD15G1258500 Malus domestica HOM05D004708 ORTHO05D005573 9.3e-61 237.3 166 71.1
AUR62004070 Chenopodium quinoa HOM05D004708 ORTHO05D005573 1.2e-60 236.9 164 72.6
BolC7t40861H Brassica oleracea HOM05D004708 ORTHO05D005573 1.6e-60 236.5 177 70.1
RcHm_v2.0_Chr2g0101171 Rosa chinensis HOM05D004708 ORTHO05D005573 1.6e-60 236.5 174 70.1
C07p04600 Brassica napus HOM05D004708 ORTHO05D005573 3.5e-60 235.3 177 69.5
Hund13990 Selenicereus undatus HOM05D004708 ORTHO05D005573 3.5e-60 235.3 173 67.6
Migut.H00962 Erythranthe guttata HOM05D004708 ORTHO05D005573 1.0e-59 233.8 168 73.8
DCAR_032374 Daucus carota HOM05D004708 ORTHO05D005573 3.0e-59 232.3 166 68.1
SalBow6G2211 Salvia bowleyana HOM05D004708 ORTHO05D005573 3.9e-59 231.9 166 73.5
DCAR_023857 Daucus carota HOM05D004708 ORTHO05D005573 5.1e-59 231.5 163 71.2
AUR62007583 Chenopodium quinoa HOM05D004708 ORTHO05D005573 6.7e-59 231.1 160 74.4
Lj2g0001027 Lotus japonicus HOM05D002605 ORTHO05D002842 8.7e-59 230.7 169 71.0
Aqoxy3G01739 Aquilegia oxysepala HOM05D004708 ORTHO05D005573 1.1e-58 230.3 167 70.7
CAN.G1645.15 Capsicum annuum HOM05D004708 ORTHO05D005573 1.5e-58 229.9 164 72.0
Ca_24863_v3 Cicer arietinum L. HOM05D004708 ORTHO05D005573 2.5e-58 229.2 165 71.5
Medtr5g020680 Medicago truncatula HOM05D004708 ORTHO05D005573 4.3e-58 228.4 169 69.8
Psat2g158360 Pisum sativum HOM05D004708 ORTHO05D005573 7.4e-58 227.6 169 68.6
TPR.G2405 Trifolium pratense HOM05D004708 ORTHO05D005573 9.6e-58 227.3 169 68.0
Lsat_1_v5_gn_2_77221 Lactuca sativa HOM05D004708 ORTHO05D005573 1.6e-57 226.5 157 74.5
THA.LOC104807464 Tarenaya hassleriana HOM05D004708 ORTHO05D005573 2.1e-57 226.1 196 62.8
Hma1.2p1_0789F.1_g218250 Hydrangea macrophylla HOM05D004708 ORTHO05D005573 3.7e-57 225.3 171 69.6
arahy.Tifrunner.gnm1.ann1.CZ32YF Arachis hypogaea HOM05D004708 ORTHO05D005573 4.8e-57 224.9 168 70.2
Ca_21297_v3 Cicer arietinum L. HOM05D004708 ORTHO05D005573 4.8e-57 224.9 165 70.3
arahy.Tifrunner.gnm1.ann1.Y7U3HW Arachis hypogaea HOM05D004708 ORTHO05D005573 6.2e-57 224.6 169 69.2
arahy.Tifrunner.gnm1.ann1.V6C6W3 Arachis hypogaea HOM05D004708 ORTHO05D005573 8.2e-57 224.2 169 69.8
unitig_21.g20250 Utricularia gibba HOM05D004708 ORTHO05D005573 8.2e-57 224.2 155 72.9
Zm00001eb231510 Zea mays HOM05D004708 ORTHO05D005573 8.2e-57 224.2 164 67.7
Aqoxy5G01592 Aquilegia oxysepala HOM05D004708 ORTHO05D005573 1.8e-56 223.0 155 72.9
Lalb_Chr05g0212721 Lupinus albus HOM05D004708 ORTHO05D005573 1.8e-56 223.0 164 71.3
Medtr8g073890 Medicago truncatula HOM05D004708 ORTHO05D005573 2.4e-56 222.6 156 73.7
VMungo1215G3002 Vigna mungo HOM05D004708 ORTHO05D005573 2.4e-56 222.6 157 70.7
ECA238G4849 Erigeron canadensis HOM05D004708 ORTHO05D005573 3.1e-56 222.2 157 71.3
PSO764G0091 Papaver somniferum HOM05D004708 ORTHO05D005573 3.1e-56 222.2 167 68.9
Sabra05G0099900 Salix brachista HOM05D004708 ORTHO05D005573 3.1e-56 222.2 214 58.9
SGA_v2.0_scaffold258G45779 Striga asiatica HOM05D004708 ORTHO05D005573 4.0e-56 221.9 168 69.0
Glyma.01G173050 Glycine max HOM05D004708 ORTHO05D005573 5.3e-56 221.5 158 71.5
FAN19G0555 Fragaria x ananassa HOM05D004708 ORTHO05D005573 9.0e-56 220.7 207 59.4
Phvul.002G032200 Phaseolus vulgaris HOM05D004708 ORTHO05D005573 1.2e-55 220.3 163 68.7
FAN25G0668 Fragaria x ananassa HOM05D004708 ORTHO05D005573 2.0e-55 219.5 168 66.7
ATR0796G251 Amborella trichopoda HOM05D004708 ORTHO05D005573 2.2e-54 216.1 164 67.1
Gohir.A12G064100 Gossypium hirsutum HOM05D004708 ORTHO05D005573 2.2e-54 216.1 165 69.1
TAR624G0473 Trochodendron aralioides HOM05D004708 ORTHO05D005573 2.2e-54 216.1 161 70.2
SEGI_37374 Sequoiadendron giganteum HOM05D004708 ORTHO05D005573 5.0e-54 214.9 155 69.7
arahy.Tifrunner.gnm1.ann1.KFYL3R Arachis hypogaea HOM05D004708 ORTHO05D005573 1.4e-53 213.4 168 68.5
FAN21G0333 Fragaria x ananassa HOM05D004708 ORTHO05D005573 5.5e-53 211.5 167 63.5
Os07g0179400 Oryza sativa ssp. japonica HOM05D004708 ORTHO05D005573 2.7e-52 209.1 156 68.6
PSO339G0290 Papaver somniferum HOM05D004708 ORTHO05D005573 2.7e-52 209.1 152 71.1
CDE12G0116 Ceratophyllum demersum HOM05D004708 ORTHO05D005573 3.0e-51 205.7 166 65.7
HPP92_014750 Vanilla planifolia HOM05D004708 ORTHO05D005573 8.7e-51 204.1 156 66.0
Dinv39998 Davidia involucrata HOM05D004708 ORTHO05D005573 5.7e-50 201.4 170 65.3
Gohir.D09G166500 Gossypium hirsutum HOM05D004708 ORTHO05D005573 2.2e-49 199.5 169 64.5
CDE01G0816 Ceratophyllum demersum HOM05D004708 ORTHO05D005573 2.4e-48 196.1 157 65.0
Glyma.02G276900 Glycine max HOM05D004708 ORTHO05D005573 3.4e-47 192.2 130 70.0
Hma1.2p1_1820F.1_g304110 Hydrangea macrophylla HOM05D004708 ORTHO05D005573 1.0e-46 190.7 136 72.1
BcaC04g22919 Brassica carinata HOM05D004708 ORTHO05D005573 2.9e-46 189.1 204 51.5
SMO357G0013 Selaginella moellendorffii HOM05D004708 ORTHO05D005573 3.8e-46 188.7 155 64.5
C09p13900 Brassica napus HOM05D004708 ORTHO05D005573 6.5e-46 188.0 176 58.5
SMO318G0001 Selaginella moellendorffii HOM05D004708 ORTHO05D005573 1.1e-45 187.2 171 59.6
Pp3c18_16890 Physcomitrium patens HOM05D004708 ORTHO05D005573 4.2e-45 185.3 153 62.7
FvH4_3g26020 Fragaria vesca HOM05D004708 ORTHO05D005573 2.7e-44 182.6 138 62.3
Gohir.D12G064000 Gossypium hirsutum HOM05D004708 ORTHO05D005573 1.0e-43 180.6 111 75.7
A09p11790 Brassica napus HOM05D004708 ORTHO05D005573 8.8e-43 177.6 127 70.1
CARHR108850 Cardamine hirsuta HOM05D004708 ORTHO05D005573 8.8e-43 177.6 118 71.2
Lj2A454G55 Lonicera japonica HOM05D004708 ORTHO05D005573 2.5e-42 176.0 143 65.0
Mapoly0065s0018 Marchantia polymorpha HOM05D004708 ORTHO05D005573 1.3e-41 173.7 149 60.4
Peaxi162Scf00130g00618 Petunia axillaris HOM05D004708 ORTHO05D005573 4.2e-37 158.7 169 54.4
CBR_g4476 Chara braunii HOM05D003322 ORTHO05D004228 7.9e-36 154.5 159 54.1
Zm00001eb301320 Zea mays HOM05D004708 ORTHO05D005573 1.8e-35 153.3 152 55.3
CSS0019358 Camellia sinensis var. sinensis HOM05D004708 ORTHO05D005573 1.1e-34 150.6 110 72.7
Nitab4.5_0009165g0010 Nicotiana tabacum HOM05D000001 ORTHO05D013582 1.5e-34 150.2 104 76.0
FAN11G2897 Fragaria x ananassa HOM05D004708 ORTHO05D009899 5.7e-34 148.3 168 51.8
PSO731G0046 Papaver somniferum HOM05D004708 ORTHO05D005573 1.3e-33 147.1 111 71.2
Nn7g38122 Nelumbo nucifera HOM05D004708 ORTHO05D005573 3.7e-33 145.6 98 68.4
PSO384G2349 Papaver somniferum HOM05D004708 ORTHO05D005573 3.1e-32 142.5 153 54.9
Os02g0134000 Oryza sativa ssp. japonica HOM05D004708 ORTHO05D005573 1.3e-30 137.1 114 64.0
FAN26G2067 Fragaria x ananassa HOM05D004708 ORTHO05D005573 5.5e-29 131.7 84 72.6
BraA09t36827Z Brassica rapa HOM05D004708 ORTHO05D005573 1.2e-28 130.6 109 65.1
AagrBONN_evm.TU.Sc2ySwM_228.2017 Anthoceros agrestis HOM05D004708 ORTHO05D005573 8.0e-28 127.9 112 62.5
CAN.G2875.1 Capsicum annuum HOM05D004708 ORTHO05D005573 2.3e-27 126.3 90 76.7
Cre13.g590550 Chlamydomonas reinhardtii HOM05D004708 ORTHO05D005573 2.6e-23 112.8 184 37.0
Actinidia33865 Actinidia chinensis HOM05D004708 ORTHO05D005573 3.5e-23 112.5 87 71.3
Pp3c18_18790 Physcomitrium patens HOM05D004708 ORTHO05D005573 7.7e-23 111.3 162 43.8
HanXRQChr17g0534461 Helianthus annuus HOM05D004708 ORTHO05D005573 7.2e-21 104.8 52 90.4
CAN.G53.14 Capsicum annuum HOM05D004708 ORTHO05D005573 1.5e-18 97.1 60 71.7
AagrBONN_evm.TU.Sc2ySwM_368.1168 Anthoceros agrestis HOM05D004708 ORTHO05D005573 4.4e-18 95.5 74 67.6
arahy.Tifrunner.gnm1.ann1.W5EA8A Arachis hypogaea HOM05D004708 ORTHO05D005573 4.8e-17 92.0 86 61.6
C09p74780 Brassica napus HOM05D004708 ORTHO05D005573 4.5e-15 85.5 59 67.8
C09p74830 Brassica napus HOM05D004708 ORTHO05D005573 4.5e-15 85.5 59 67.8
MCO08G231 Micromonas commoda HOM05D004708 ORTHO05D005573 2.5e-13 79.7 150 34.0
SGA_v2.0_scaffold276G46612 Striga asiatica HOM05D004708 ORTHO05D005573 2.5e-13 79.7 113 47.8
Cfa027114 Carpinus fangiana HOM05D004708 ORTHO05D005573 5.5e-13 78.6 194 28.9
CAN.G53.15 Capsicum annuum HOM05D004708 ORTHO05D005573 9.4e-13 77.8 53 81.1
PRCOL_00004729 Prasinoderma coloniale HOM05D004708 ORTHO05D005573 1.4e-11 73.9 165 33.9
BcaC06g36392 Brassica carinata HOM05D000492 ORTHO05D005571 3.0e-11 72.8 62 64.5
Oeu044133.1 Olea europaea HOM05D004708 ORTHO05D005573 1.3e-09 67.4 45 75.6
Actinidia12710 Actinidia chinensis HOM05D004708 ORTHO05D005573 3.5e-07 59.3 48 58.3


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