Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_3G014400 Cucumis sativus L. HOM05D022460 ORTHO05D174413 1.1e-84 316.6 157 100.0
CsaV3_1G014230 Cucumis sativus L. HOM05D022460 ORTHO05D172691 1.9e-49 199.5 106 93.4
CsaV3_3G026230 Cucumis sativus L. HOM05D022460 ORTHO05D172177 6.1e-24 114.8 58 91.4
CsaV3_7G018500 Cucumis sativus L. HOM05D022460 ORTHO05D173672 2.6e-22 109.4 58 89.7
CsaV3_3G025200 Cucumis sativus L. HOM05D022460 ORTHO05D172124 4.4e-22 108.6 58 87.9
MELO3C014620.2 Cucumis melo HOM05D000090 ORTHO05D001584 1.8e-12 76.6 47 72.3
CsaV3_4G024030 Cucumis sativus L. HOM05D000090 ORTHO05D001584 5.9e-11 71.6 47 68.1
arahy.Tifrunner.gnm1.ann1.WRGL83 Arachis hypogaea HOM05D000090 ORTHO05D001584 5.2e-07 58.5 40 57.5
Cfa009706 Carpinus fangiana HOM05D000090 ORTHO05D001584 5.2e-07 58.5 39 59.0
Dinv36299 Davidia involucrata HOM05D000090 ORTHO05D001584 5.2e-07 58.5 40 57.5
Manes.06G168501 Manihot esculenta HOM05D000090 ORTHO05D001584 6.8e-07 58.2 49 51.0
Thecc.09G225100 Theobroma cacao HOM05D000090 ORTHO05D001584 6.8e-07 58.2 46 50.0
Potri.001G016300 Populus trichocarpa HOM05D000090 ORTHO05D001584 8.9e-07 57.8 49 51.0
Haze_23054 Corylus avellana HOM05D000090 ORTHO05D001584 1.2e-06 57.4 39 56.4
Haze_23059 Corylus avellana HOM05D000090 ORTHO05D001584 1.2e-06 57.4 39 56.4
CANSAT54G2904 Cannabis sativa HOM05D000090 ORTHO05D001584 1.5e-06 57.0 40 60.0
Lalb_Chr14g0372261 Lupinus albus HOM05D000090 ORTHO05D001584 1.5e-06 57.0 40 57.5
Hma1.2p1_0728F.1_g209390 Hydrangea macrophylla HOM05D000090 ORTHO05D001584 2.0e-06 56.6 40 57.5
QL01p006080 Quercus lobata HOM05D000090 ORTHO05D001584 2.0e-06 56.6 32 68.8
TPR.G6904 Trifolium pratense HOM05D000090 ORTHO05D001584 2.6e-06 56.2 47 48.9
Duzib150G1528 Durio zibethinus HOM05D000090 ORTHO05D001584 3.4e-06 55.8 46 47.8
Gohir.D08G087300 Gossypium hirsutum HOM05D000090 ORTHO05D001584 4.4e-06 55.5 42 52.4
Gorai.004G091900 Gossypium raimondii HOM05D000090 ORTHO05D001584 4.4e-06 55.5 42 52.4
Glyma.15G032000 Glycine max HOM05D000090 ORTHO05D001584 5.8e-06 55.1 40 57.5
SHI04693 Sapria himalayana HOM05D000090 ORTHO05D001584 5.8e-06 55.1 52 42.3
CSS0046735 Camellia sinensis var. sinensis HOM05D000090 ORTHO05D001584 7.5e-06 54.7 40 57.5
Ciclev10015029m.g Citrus clementina HOM05D000090 ORTHO05D001584 7.5e-06 54.7 41 51.2
Psat5g288720 Pisum sativum HOM05D000090 ORTHO05D001584 7.5e-06 54.7 47 46.8
VMungo1080G1540 Vigna mungo HOM05D000090 ORTHO05D001584 7.5e-06 54.7 35 65.7
Ca_01275_v3 Cicer arietinum L. HOM05D000090 ORTHO05D001584 9.8e-06 54.3 48 45.8
ECA238G1246 Erigeron canadensis HOM05D000090 ORTHO05D001584 9.8e-06 54.3 40 55.0
Potri.003G210400 Populus trichocarpa HOM05D000090 ORTHO05D001584 9.8e-06 54.3 40 52.5


User provided reference genes

Program Settings