Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_3G013610 Cucumis sativus L. HOM05D004989 ORTHO05D006335 4.4e-203 711.1 359 100.0
MELO3C006557.2 Cucumis melo HOM05D004989 ORTHO05D006335 3.1e-196 688.3 359 96.1
Sed0017941 Sechium edule HOM05D004989 ORTHO05D006335 2.4e-185 652.1 359 91.1
CiPaw.02G093300 Carya illinoinensis HOM05D004989 ORTHO05D006335 3.4e-155 552.0 357 76.8
Cfa015597 Carpinus fangiana HOM05D004989 ORTHO05D006335 1.4e-153 546.6 359 76.9
TAR365G0616 Trochodendron aralioides HOM05D004989 ORTHO05D006335 1.4e-153 546.6 359 75.8
MD16G1186000 Malus domestica HOM05D004989 ORTHO05D006335 9.3e-153 543.9 363 75.2
Prupe.1G152800 Prunus persica HOM05D004989 ORTHO05D006335 1.6e-152 543.1 362 76.5
QL06p003872 Quercus lobata HOM05D004989 ORTHO05D006335 3.5e-152 542.0 371 74.4
RcHm_v2.0_Chr4g0417841 Rosa chinensis HOM05D004989 ORTHO05D006335 1.8e-151 539.7 364 76.1
Nn1g02182 Nelumbo nucifera HOM05D004989 ORTHO05D006335 2.3e-151 539.3 359 74.1
FvH4_4g14760 Fragaria vesca HOM05D004989 ORTHO05D006335 3.9e-151 538.5 360 76.7
CANSAT78G0752 Cannabis sativa HOM05D004989 ORTHO05D006335 1.9e-150 536.2 359 74.4
Dinv38405 Davidia involucrata HOM05D004989 ORTHO05D006335 3.7e-149 531.9 359 75.2
GSVIVG01017902001 Vitis vinifera HOM05D004989 ORTHO05D006335 3.7e-149 531.9 360 76.9
MBI14_g28267_MAGBIO Magnolia biondii HOM05D004989 ORTHO05D006335 1.1e-148 530.4 350 75.1
Dinv44490 Davidia involucrata HOM05D004989 ORTHO05D006335 1.4e-148 530.0 356 75.3
VMungo1215G0587 Vigna mungo HOM05D004989 ORTHO05D006335 1.8e-148 529.6 359 74.9
Potri.008G203600 Populus trichocarpa HOM05D004989 ORTHO05D006335 2.4e-148 529.3 352 76.7
Glyma.07G257800 Glycine max HOM05D004989 ORTHO05D006335 4.1e-148 528.5 359 74.9
Lalb_Chr18g0056141 Lupinus albus HOM05D004989 ORTHO05D006335 1.7e-146 523.1 357 74.2
Glyma.17G016200 Glycine max HOM05D004989 ORTHO05D006335 2.2e-146 522.7 356 74.2
arahy.Tifrunner.gnm1.ann1.L7AGGG Arachis hypogaea HOM05D004989 ORTHO05D006335 2.9e-146 522.3 365 72.9
Thecc.04G224100 Theobroma cacao HOM05D004989 ORTHO05D006335 1.1e-145 520.4 360 72.8
FAN17G0130 Fragaria x ananassa HOM05D004989 ORTHO05D006335 1.4e-145 520.0 379 72.0
arahy.Tifrunner.gnm1.ann1.8A1ZYN Arachis hypogaea HOM05D004989 ORTHO05D006335 2.5e-145 519.2 365 72.6
Manes.03G183100 Manihot esculenta HOM05D004989 ORTHO05D006335 2.5e-145 519.2 357 73.4
CSS0000312 Camellia sinensis var. sinensis HOM05D004989 ORTHO05D006335 5.5e-145 518.1 364 71.7
Lj6g0002948 Lotus japonicus HOM05D004989 ORTHO05D006335 1.6e-144 516.5 357 73.4
CSS0017868 Camellia sinensis var. sinensis HOM05D004989 ORTHO05D006335 6.1e-144 514.6 357 73.7
Medtr2g022530 Medicago truncatula HOM05D004989 ORTHO05D006335 1.1e-142 510.4 358 73.5
Aqoxy3G00936 Aquilegia oxysepala HOM05D004989 ORTHO05D006335 9.7e-142 507.3 357 70.9
Ca_00634_v3 Cicer arietinum L. HOM05D004989 ORTHO05D006335 9.7e-142 507.3 368 70.7
Peaxi162Scf00134g02033 Petunia axillaris HOM05D004989 ORTHO05D006335 1.3e-141 506.9 359 71.0
vmacro15315 Vaccinium macrocarpon HOM05D004989 ORTHO05D006335 3.7e-141 505.4 360 72.2
PSO017G3853 Papaver somniferum HOM05D004989 ORTHO05D006335 6.3e-141 504.6 368 69.3
Sabra08G0157900 Salix brachista HOM05D004989 ORTHO05D006335 1.8e-140 503.1 388 68.8
COL.COLO4_26626 Corchorus olitorius HOM05D004989 ORTHO05D006335 5.3e-140 501.5 395 66.1
FAN22G1009 Fragaria x ananassa HOM05D004989 ORTHO05D006335 9.1e-140 500.7 377 70.0
Gorai.005G041000 Gossypium raimondii HOM05D004989 ORTHO05D006335 5.9e-139 498.0 362 70.2
Atru.chr4.2544 Acer truncatum HOM05D004989 ORTHO05D006335 1.0e-138 497.3 317 77.3
RcHm_v2.0_Chr0c32g0501661 Rosa chinensis HOM05D004989 ORTHO05D006335 1.0e-138 497.3 357 73.9
CDE07G1289 Ceratophyllum demersum HOM05D004989 ORTHO05D006335 1.3e-138 496.9 356 70.2
EL10Ac3g05973 Beta vulgaris HOM05D004989 ORTHO05D006335 2.9e-138 495.7 355 70.4
Gohir.D02G037100 Gossypium hirsutum HOM05D004989 ORTHO05D006335 2.9e-138 495.7 362 69.9
AUR62026218 Chenopodium quinoa HOM05D004989 ORTHO05D006335 1.1e-137 493.8 349 70.8
THA.LOC104818802 Tarenaya hassleriana HOM05D004989 ORTHO05D006335 1.1e-137 493.8 365 70.1
Gohir.A02G029300 Gossypium hirsutum HOM05D004989 ORTHO05D006335 2.5e-137 492.7 362 69.3
HanXRQChr12g0359311 Helianthus annuus HOM05D004989 ORTHO05D006335 4.2e-137 491.9 364 70.1
Phvul.003G091700 Phaseolus vulgaris HOM05D004989 ORTHO05D006335 9.4e-137 490.7 320 75.3
Eucgr.B01122 Eucalyptus grandis HOM05D004989 ORTHO05D006335 1.2e-136 490.3 359 68.8
AL6G30570 Arabidopsis lyrata HOM05D004989 ORTHO05D006335 1.6e-136 490.0 360 70.8
Carub.0006s1748 Capsella rubella HOM05D004989 ORTHO05D006335 1.6e-136 490.0 360 70.6
CARHR193800 Cardamine hirsuta HOM05D004989 ORTHO05D006335 2.7e-136 489.2 361 70.4
Thhalv10013830m.g Eutrema salsugineum HOM05D004989 ORTHO05D006335 2.7e-136 489.2 359 70.8
Rhsim02G0020900 Rhododendron simsii HOM05D004989 ORTHO05D006335 2.7e-136 489.2 395 65.3
Cc03_g03230 Coffea canephora HOM05D004989 ORTHO05D006335 6.1e-136 488.0 362 68.2
RcHm_v2.0_Chr0c32g0501471 Rosa chinensis HOM05D004989 ORTHO05D006335 7.9e-136 487.6 365 70.1
Sp6g25210 Schrenkiella parvula HOM05D004989 ORTHO05D006335 1.4e-135 486.9 360 70.3
MSTRG.4001 Avicennia marina HOM05D004989 ORTHO05D006335 2.3e-135 486.1 361 69.8
ECA234G2869 Erigeron canadensis HOM05D004989 ORTHO05D006335 2.3e-135 486.1 331 73.4
TWI73G0966 Tripterygium wilfordii HOM05D004989 ORTHO05D006335 2.3e-135 486.1 361 69.8
BolC3t13560H Brassica oleracea HOM05D004989 ORTHO05D006335 3.0e-135 485.7 360 70.3
SalBow2G0224 Salvia bowleyana HOM05D004989 ORTHO05D006335 2.0e-134 483.0 370 66.8
AT5G19150 Arabidopsis thaliana HOM05D004989 ORTHO05D006335 2.6e-134 482.6 360 70.3
BcaB01g04874 Brassica carinata HOM05D004989 ORTHO05D006335 2.6e-134 482.6 360 69.4
PSO478G2898 Papaver somniferum HOM05D004989 ORTHO05D006335 4.4e-134 481.9 312 75.6
Aa31LG11G10490 Aethionema arabicum HOM05D004989 ORTHO05D006335 5.7e-134 481.5 358 69.6
HPP92_005520 Vanilla planifolia HOM05D004989 ORTHO05D006335 3.7e-133 478.8 362 68.5
Migut.G00301 Erythranthe guttata HOM05D004989 ORTHO05D006335 4.8e-133 478.4 360 69.2
BcaB01g05136 Brassica carinata HOM05D004989 ORTHO05D006335 8.2e-133 477.6 360 69.2
BraA03t10257Z Brassica rapa HOM05D004989 ORTHO05D006335 1.4e-132 476.9 374 66.6
Ah.07g202120 Amaranthus hybridus HOM05D004989 ORTHO05D006335 4.1e-132 475.3 356 68.3
CAN.G69.27 Capsicum annuum HOM05D004989 ORTHO05D006335 5.3e-132 474.9 326 70.6
Haze_00947 Corylus avellana HOM05D004989 ORTHO05D006335 7.0e-132 474.6 351 69.2
Solyc01g079860.3 Solanum lycopersicum HOM05D004989 ORTHO05D006335 1.2e-131 473.8 326 71.5
C03p10950 Brassica napus HOM05D004989 ORTHO05D006335 1.5e-131 473.4 369 66.9
A03p09380 Brassica napus HOM05D004989 ORTHO05D006335 2.6e-131 472.6 349 69.9
Sopen01g031620 Solanum pennellii HOM05D004989 ORTHO05D006335 5.9e-131 471.5 326 70.9
Hund12013 Selenicereus undatus HOM05D004989 ORTHO05D006335 1.0e-130 470.7 318 72.3
Nitab4.5_0005927g0020 Nicotiana tabacum HOM05D004989 ORTHO05D006335 5.0e-130 468.4 381 64.6
MSTRG.10011 Avicennia marina HOM05D004989 ORTHO05D006335 6.5e-130 468.0 322 73.0
Ciclev10005119m.g Citrus clementina HOM05D004989 ORTHO05D006335 1.1e-129 467.2 303 74.6
RcHm_v2.0_Chr3g0483801 Rosa chinensis HOM05D004989 ORTHO05D006335 1.4e-129 466.8 284 82.0
BcaB05g23373 Brassica carinata HOM05D004989 ORTHO05D006335 1.9e-129 466.5 324 73.1
ATR0743G104 Amborella trichopoda HOM05D004989 ORTHO05D006335 4.2e-129 465.3 351 68.7
BraA02t05485Z Brassica rapa HOM05D004989 ORTHO05D006335 1.2e-128 463.8 324 71.9
C03p10960 Brassica napus HOM05D004989 ORTHO05D006335 1.6e-128 463.4 358 67.0
Os11g0276300 Oryza sativa ssp. japonica HOM05D004989 ORTHO05D006335 6.1e-128 461.5 370 64.9
unitig_736.g22488 Utricularia gibba HOM05D004989 ORTHO05D006335 6.1e-128 461.5 358 66.5
A02p05270 Brassica napus HOM05D004989 ORTHO05D006335 3.9e-127 458.8 315 74.0
BcaC03g13646 Brassica carinata HOM05D004989 ORTHO05D006335 1.1e-126 457.2 327 71.3
BolC2t06940H Brassica oleracea HOM05D004989 ORTHO05D006335 1.1e-126 457.2 327 71.3
ClCG05G005360 Citrullus lanatus HOM05D004989 ORTHO05D006335 1.5e-126 456.8 242 93.8
Zm00001eb168810 Zea mays HOM05D004989 ORTHO05D006335 1.5e-126 456.8 324 68.8
Nitab4.5_0000630g0050 Nicotiana tabacum HOM05D004989 ORTHO05D006335 3.3e-126 455.7 291 75.9
PGSC0003DMG400009024 Solanum tuberosum HOM05D004989 ORTHO05D006335 1.2e-123 447.2 293 74.1
C02p10390 Brassica napus HOM05D004989 ORTHO05D006335 2.6e-123 446.0 314 71.7
Actinidia36991 Actinidia chinensis HOM05D004989 ORTHO05D006335 6.5e-122 441.4 352 67.6
Lj6g0017812 Lotus japonicus HOM05D004989 ORTHO05D006335 2.5e-121 439.5 317 70.0
Oeu042787.2 Olea europaea HOM05D004989 ORTHO05D006335 2.3e-119 433.0 429 55.5
Sc13g0004100 Simmondsia chinensis HOM05D004989 ORTHO05D006335 2.3e-119 433.0 296 73.6
Psat1g182800 Pisum sativum HOM05D004989 ORTHO05D006335 8.3e-117 424.5 263 80.2
Lj6A574T37 Lonicera japonica HOM05D004989 ORTHO05D006335 1.2e-112 410.6 244 79.9
Hma1.2p1_2553F.1_g324330 Hydrangea macrophylla HOM05D004989 ORTHO05D006335 2.8e-109 399.4 258 78.7
Mapoly0063s0079 Marchantia polymorpha HOM05D004989 ORTHO05D006335 2.0e-102 376.7 342 57.0
C03p10910 Brassica napus HOM05D004989 ORTHO05D006335 1.0e-98 364.4 259 70.7
SMO361G0104 Selaginella moellendorffii HOM05D004989 ORTHO05D006335 2.3e-98 363.2 305 61.3
Duzib151G0886 Durio zibethinus HOM05D004989 ORTHO05D006335 5.0e-98 362.1 363 55.9
SHI00391 Sapria himalayana HOM05D004989 ORTHO05D006335 6.6e-98 361.7 297 62.6
CBR_g26053 Chara braunii HOM05D004989 ORTHO05D006335 1.9e-97 360.1 326 56.7
PGR142G2933 Punica granatum HOM05D004989 ORTHO05D006335 3.3e-97 359.4 356 55.3
C03p10860 Brassica napus HOM05D004989 ORTHO05D006335 6.1e-96 355.1 356 55.9
HPP92_005588 Vanilla planifolia HOM05D004989 ORTHO05D006335 1.1e-92 344.4 294 63.6
BcaB01g05294 Brassica carinata HOM05D004989 ORTHO05D006335 1.4e-92 344.0 367 54.5
SGA_v2.0_scaffold39G15320 Striga asiatica HOM05D004989 ORTHO05D006335 7.5e-86 321.6 196 78.1
arahy.Tifrunner.gnm1.ann1.BS3LH0 Arachis hypogaea HOM05D004989 ORTHO05D006335 4.9e-85 318.9 365 51.2
AagrBONN_evm.TU.Sc2ySwM_344.1251 Anthoceros agrestis HOM05D004989 ORTHO05D006335 8.3e-85 318.2 336 51.8
FAN07G2774 Fragaria x ananassa HOM05D004989 ORTHO05D006335 7.0e-84 315.1 266 63.9
Pp3c8_1650 Physcomitrium patens HOM05D004989 ORTHO05D006335 3.0e-82 309.7 285 55.8
TPR.G28611 Trifolium pratense HOM05D004989 ORTHO05D006739 1.4e-76 290.8 176 81.8
Hma1.2p1_2553F.1_g324320 Hydrangea macrophylla HOM05D004989 ORTHO05D006335 1.2e-72 277.7 198 72.7
arahy.Tifrunner.gnm1.ann1.J5ZRE9 Arachis hypogaea HOM05D004989 ORTHO05D006335 3.0e-66 256.5 192 67.2
Cre06.g250500 Chlamydomonas reinhardtii HOM05D004989 ORTHO05D006335 1.5e-65 254.2 334 41.3
Cpa.g.sc147.7 Carica papaya HOM05D004989 ORTHO05D006335 7.3e-65 251.9 181 70.7
arahy.Tifrunner.gnm1.ann1.HR1U72 Arachis hypogaea HOM05D004989 ORTHO05D006335 8.1e-64 248.4 191 66.5
Ca_00654_v3 Cicer arietinum L. HOM05D004989 ORTHO05D006335 9.0e-63 245.0 198 65.7
MCO05G313 Micromonas commoda HOM05D004989 ORTHO05D006335 5.8e-62 242.3 331 41.7
Hma1.2p1_0995F.1_g245810 Hydrangea macrophylla HOM05D004989 ORTHO05D006335 2.2e-61 240.4 169 74.0
TPR.G30683 Trifolium pratense HOM05D004989 ORTHO05D006335 3.8e-61 239.6 165 73.3
SEGI_35556 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 7.1e-60 235.3 204 61.3
PRCOL_00001617 Prasinoderma coloniale HOM05D004989 ORTHO05D006335 4.0e-55 219.5 341 41.1
Atru.chr4.2545 Acer truncatum HOM05D004989 ORTHO05D006335 7.1e-52 208.8 152 67.8
SEGI_27897 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 3.0e-50 203.4 124 75.8
SEGI_07547 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 5.1e-50 202.6 142 66.2
Cfa024379 Carpinus fangiana HOM05D004989 ORTHO05D006335 3.1e-47 193.4 285 37.5
Haze_26760 Corylus avellana HOM05D004980 ORTHO05D006505 1.0e-45 188.3 259 42.1
Hund03167 Selenicereus undatus HOM05D004989 ORTHO05D006335 2.5e-44 183.7 171 56.1
Cre05.g234664 Chlamydomonas reinhardtii HOM05D004989 ORTHO05D006335 7.1e-44 182.2 373 34.0
Atru.chr4.2547 Acer truncatum HOM05D004989 ORTHO05D000586 5.8e-38 162.5 112 69.6
Cfa015379 Carpinus fangiana HOM05D000407 ORTHO05D002981 1.3e-37 161.4 158 55.7
SEGI_12399 Sequoiadendron giganteum HOM05D004989 ORTHO05D006335 9.3e-36 155.2 129 61.2
Cpa.g.sc147.5 Carica papaya HOM05D004989 ORTHO05D006335 4.1e-31 139.8 95 73.7
Actinidia08511 Actinidia chinensis HOM05D004989 ORTHO05D006335 1.0e-26 125.2 323 33.1
TPR.G30666 Trifolium pratense HOM05D004989 ORTHO05D006335 2.8e-24 117.1 85 70.6
Cpa.g.sc147.6 Carica papaya HOM05D004989 ORTHO05D006335 4.2e-20 103.2 70 67.1
CBR_g19747 Chara braunii HOM05D000409 ORTHO05D000184 9.4e-20 102.1 77 64.9
AUR62026378 Chenopodium quinoa HOM05D004989 ORTHO05D006335 4.4e-17 93.2 71 60.6
FAN07G1160 Fragaria x ananassa HOM05D004989 ORTHO05D006335 3.9e-10 70.1 48 70.8


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