Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_3G013300 Cucumis sativus L. HOM05D007425 ORTHO05D009334 1.1e-90 336.7 180 100.0
MELO3C006532.2 Cucumis melo HOM05D007425 ORTHO05D009334 1.3e-86 323.2 181 96.7
Sed0025719 Sechium edule HOM05D007425 ORTHO05D009334 2.2e-70 269.2 181 84.5
Sed0000110 Sechium edule HOM05D007425 ORTHO05D009334 3.9e-67 258.5 180 78.9
MD13G1193800 Malus domestica HOM05D007425 ORTHO05D009334 1.6e-31 140.2 180 52.8
Manes.03G178200 Manihot esculenta HOM05D007425 ORTHO05D009334 7.7e-31 137.9 175 52.6
Cpa.g.sc9.287 Carica papaya HOM05D007425 ORTHO05D009334 3.8e-30 135.6 179 52.0
Prupe.1G014400 Prunus persica HOM05D007425 ORTHO05D009334 3.8e-30 135.6 182 48.4
Aa31LG9G2430 Aethionema arabicum HOM05D007425 ORTHO05D009334 4.2e-29 132.1 143 54.5
CiPaw.01G166700 Carya illinoinensis HOM05D007425 ORTHO05D009334 7.2e-29 131.3 188 48.9
Haze_00892 Corylus avellana HOM05D007425 ORTHO05D009334 7.2e-29 131.3 179 52.0
Hma1.2p1_0275F.1_g110893 Hydrangea macrophylla HOM05D007425 ORTHO05D009334 9.5e-29 131.0 118 65.3
Hma1.2p1_0275F.1_g110900 Hydrangea macrophylla HOM05D007425 ORTHO05D009334 9.5e-29 131.0 118 65.3
Eucgr.L01274 Eucalyptus grandis HOM05D007425 ORTHO05D009334 1.6e-28 130.2 135 58.5
Eucgr.L02493 Eucalyptus grandis HOM05D007425 ORTHO05D009334 1.6e-28 130.2 135 57.8
Gohir.A09G216200 Gossypium hirsutum HOM05D007425 ORTHO05D009334 2.1e-28 129.8 178 51.7
RcHm_v2.0_Chr7g0190521 Rosa chinensis HOM05D007425 ORTHO05D009334 2.8e-28 129.4 188 48.4
MD16G1194500 Malus domestica HOM05D007425 ORTHO05D009334 4.7e-28 128.6 186 48.9
AL7G40980 Arabidopsis lyrata HOM05D007425 ORTHO05D009334 8.0e-28 127.9 143 53.8
Gohir.D09G218600 Gossypium hirsutum HOM05D007425 ORTHO05D009334 8.0e-28 127.9 178 51.7
Gorai.006G239600 Gossypium raimondii HOM05D007425 ORTHO05D009334 1.4e-27 127.1 183 50.3
Duzib212G0056 Durio zibethinus HOM05D007425 ORTHO05D009334 1.8e-27 126.7 177 48.6
Oeu031224.1 Olea europaea HOM05D007425 ORTHO05D009334 1.8e-27 126.7 123 59.3
Oeu031227.1 Olea europaea HOM05D007425 ORTHO05D009334 1.8e-27 126.7 123 59.3
Oeu031228.1 Olea europaea HOM05D007425 ORTHO05D009334 1.8e-27 126.7 123 59.3
Thecc.04G232500 Theobroma cacao HOM05D007425 ORTHO05D009334 1.8e-27 126.7 179 50.3
Cfa015652 Carpinus fangiana HOM05D007425 ORTHO05D009334 2.3e-27 126.3 177 48.6
PGR142G3696 Punica granatum HOM05D007425 ORTHO05D009334 2.3e-27 126.3 181 48.6
CSS0011351 Camellia sinensis var. sinensis HOM05D007425 ORTHO05D009334 3.0e-27 125.9 183 46.4
Lj3P734T17 Lonicera japonica HOM05D007425 ORTHO05D009334 5.2e-27 125.2 177 48.0
Cc03_g03840 Coffea canephora HOM05D007425 ORTHO05D009334 6.8e-27 124.8 190 46.3
COL.COLO4_21483 Corchorus olitorius HOM05D007425 ORTHO05D009334 6.8e-27 124.8 134 58.2
THA.LOC104822268 Tarenaya hassleriana HOM05D007425 ORTHO05D009334 6.8e-27 124.8 152 52.0
Duzib151G0901 Durio zibethinus HOM05D007425 ORTHO05D009334 8.8e-27 124.4 191 48.7
Sp7g13010 Schrenkiella parvula HOM05D007425 ORTHO05D009334 8.8e-27 124.4 175 49.1
Sabra08G0117000 Salix brachista HOM05D007425 ORTHO05D009334 1.2e-26 124.0 180 48.3
SGA_v2.0_scaffold39G15229 Striga asiatica HOM05D007425 ORTHO05D009334 1.2e-26 124.0 181 46.4
TAR636G0682 Trochodendron aralioides HOM05D007425 ORTHO05D009334 1.2e-26 124.0 139 54.0
CARHR221470 Cardamine hirsuta HOM05D007425 ORTHO05D009334 1.5e-26 123.6 143 53.8
MSTRG.24738 Avicennia marina HOM05D007425 ORTHO05D009334 2.0e-26 123.2 181 47.5
BraA01t02180Z Brassica rapa HOM05D007425 ORTHO05D009334 2.6e-26 122.9 166 51.2
Potri.008G153400 Populus trichocarpa HOM05D007425 ORTHO05D009334 2.6e-26 122.9 180 49.4
QL06p002223 Quercus lobata HOM05D007425 ORTHO05D009334 2.6e-26 122.9 186 45.7
THA.LOC104803027 Tarenaya hassleriana HOM05D007425 ORTHO05D009334 2.6e-26 122.9 125 60.0
Migut.G00341 Erythranthe guttata HOM05D007425 ORTHO05D009334 3.4e-26 122.5 173 48.0
FAN13G1551 Fragaria x ananassa HOM05D007425 ORTHO05D009334 3.4e-26 122.5 182 45.6
Atru.chr4.2458 Acer truncatum HOM05D007425 ORTHO05D009334 5.7e-26 121.7 185 48.1
BcaNung00324 Brassica carinata HOM05D007425 ORTHO05D009334 7.5e-26 121.3 142 54.2
Sc13g0004450 Simmondsia chinensis HOM05D007425 ORTHO05D009334 9.8e-26 120.9 156 46.8
Dinv13997 Davidia involucrata HOM05D001000 ORTHO05D002976 2.2e-25 119.8 112 64.3
AT4G14870 Arabidopsis thaliana HOM05D007425 ORTHO05D009334 2.8e-25 119.4 87 72.4
C01p28260 Brassica napus HOM05D007425 ORTHO05D009334 2.8e-25 119.4 166 50.6
Carub.0007s2724 Capsella rubella HOM05D007425 ORTHO05D009334 3.7e-25 119.0 96 68.8
BcaC09g50166 Brassica carinata HOM05D007425 ORTHO05D009334 4.9e-25 118.6 166 50.6
BolC1t02755H Brassica oleracea HOM05D007425 ORTHO05D009334 4.9e-25 118.6 166 50.6
Eucgr.B01085 Eucalyptus grandis HOM05D007425 ORTHO05D009334 8.3e-25 117.9 111 59.5
VMungo1215G1239 Vigna mungo HOM05D007425 ORTHO05D009334 8.3e-25 117.9 99 62.6
HanXRQChr08g0229221 Helianthus annuus HOM05D007425 ORTHO05D009334 1.4e-24 117.1 89 71.9
DCAR_002385 Daucus carota HOM05D007425 ORTHO05D009334 1.8e-24 116.7 182 45.6
FAN04G2988 Fragaria x ananassa HOM05D007425 ORTHO05D009334 2.4e-24 116.3 122 59.0
PGSC0003DMG400032277 Solanum tuberosum HOM05D007425 ORTHO05D009334 2.4e-24 116.3 92 69.6
Nn4g26476 Nelumbo nucifera HOM05D007425 ORTHO05D009334 3.1e-24 115.9 190 46.8
Sopen09g030940 Solanum pennellii HOM05D007425 ORTHO05D009334 3.1e-24 115.9 148 54.1
CANSAT78G0262 Cannabis sativa HOM05D007425 ORTHO05D009334 7.0e-24 114.8 188 45.7
Ciclev10006055m.g Citrus clementina HOM05D007425 ORTHO05D009334 1.6e-23 113.6 71 80.3
Thhalv10026366m.g Eutrema salsugineum HOM05D007425 ORTHO05D009334 1.6e-23 113.6 143 50.3
PSO170G1990 Papaver somniferum HOM05D007425 ORTHO05D009334 1.6e-23 113.6 135 56.3
SalBow3G4464 Salvia bowleyana HOM05D007425 ORTHO05D009334 1.6e-23 113.6 146 50.7
Glyma.01G237800 Glycine max HOM05D007425 ORTHO05D009334 2.0e-23 113.2 103 59.2
Lsat_1_v5_gn_9_18440 Lactuca sativa HOM05D007425 ORTHO05D009334 2.0e-23 113.2 90 65.6
MBI16_g00841_MAGBIO Magnolia biondii HOM05D007425 ORTHO05D009334 2.0e-23 113.2 123 59.3
PSO017G2433 Papaver somniferum HOM05D007425 ORTHO05D009334 3.5e-23 112.5 177 45.8
FvH4_5g07900 Fragaria vesca HOM05D007425 ORTHO05D009334 4.5e-23 112.1 120 55.8
FAN18G2754 Fragaria x ananassa HOM05D007425 ORTHO05D009334 4.5e-23 112.1 120 55.8
Rhsim04G0201800 Rhododendron simsii HOM05D007425 ORTHO05D009334 4.5e-23 112.1 188 44.7
CAN.G490.15 Capsicum annuum HOM05D007425 ORTHO05D009334 1.0e-22 110.9 73 79.5
Phvul.002G045100 Phaseolus vulgaris HOM05D007425 ORTHO05D009334 1.0e-22 110.9 139 48.9
EL10Ac3g06446 Beta vulgaris HOM05D007425 ORTHO05D009334 1.3e-22 110.5 158 44.3
Nitab4.5_0004258g0010 Nicotiana tabacum HOM05D007425 ORTHO05D009334 1.3e-22 110.5 196 43.4
Ah.14g089400 Amaranthus hybridus HOM05D007425 ORTHO05D009334 3.8e-22 109.0 163 44.8
TAR636G0596 Trochodendron aralioides HOM05D007425 ORTHO05D009334 8.6e-22 107.8 67 82.1
ECA247G1832 Erigeron canadensis HOM05D007425 ORTHO05D009334 3.3e-21 105.9 91 63.7
LjContig00408g0025154 Lotus japonicus HOM05D007425 ORTHO05D009334 3.3e-21 105.9 102 57.8
Psat2g124560 Pisum sativum HOM05D007425 ORTHO05D009334 3.3e-21 105.9 84 69.0
arahy.Tifrunner.gnm1.ann1.CGGZ98 Arachis hypogaea HOM05D007425 ORTHO05D009334 7.3e-21 104.8 82 72.0
unitig_32.g10818 Utricularia gibba HOM05D007425 ORTHO05D009334 9.5e-21 104.4 115 53.0
Medtr5g038520 Medicago truncatula HOM05D007425 ORTHO05D009334 2.1e-20 103.2 85 61.2
HPP92_010419 Vanilla planifolia HOM05D007425 ORTHO05D009334 2.1e-20 103.2 119 52.1
Aqoxy7G02632 Aquilegia oxysepala HOM05D007425 ORTHO05D009334 3.6e-20 102.4 180 42.2
AUR62033636 Chenopodium quinoa HOM05D007425 ORTHO05D009334 6.1e-20 101.7 154 46.8
Ca_04746_v3 Cicer arietinum L. HOM05D007425 ORTHO05D009334 6.1e-20 101.7 75 73.3
Zm00001eb375110 Zea mays HOM05D007425 ORTHO05D009334 5.2e-19 98.6 141 48.2
Nitab4.5_0000043g0080 Nicotiana tabacum HOM05D007425 ORTHO05D009334 6.8e-19 98.2 172 45.3
CDE04G2079 Ceratophyllum demersum HOM05D007425 ORTHO05D009334 8.9e-19 97.8 114 50.9
SGA_v2.0_scaffold52G19002 Striga asiatica HOM05D006387 ORTHO05D008533 2.9e-17 92.8 69 68.1
Os04g0306750 Oryza sativa ssp. japonica HOM05D007425 ORTHO05D009334 4.9e-17 92.0 59 76.3
ATR0626G045 Amborella trichopoda HOM05D007425 ORTHO05D009334 1.1e-16 90.9 169 43.2
Lalb_Chr05g0211001 Lupinus albus HOM05D007425 ORTHO05D009334 2.0e-15 86.7 87 52.9
SEGI_06187 Sequoiadendron giganteum HOM05D007425 ORTHO05D009334 5.9e-15 85.1 65 66.2
Pp3c2_27330 Physcomitrium patens HOM05D007425 ORTHO05D009334 1.6e-12 77.0 141 39.7
Os08g0399050 Oryza sativa ssp. japonica HOM05D007425 ORTHO05D009334 1.5e-10 70.5 51 70.6
Mapoly0070s0085 Marchantia polymorpha HOM05D007425 ORTHO05D009334 5.8e-10 68.6 128 39.8
AUR62034746 Chenopodium quinoa HOM05D007425 ORTHO05D009334 7.8e-07 58.2 141 36.2
MCO02G394 Micromonas commoda HOM05D007425 ORTHO05D009334 3.0e-06 56.2 108 38.9
SMO358G0357 Selaginella moellendorffii HOM05D013303 ORTHO05D015288 3.0e-06 56.2 137 34.3
CBR_g18894 Chara braunii HOM05D007425 ORTHO05D009334 5.0e-06 55.5 98 36.7


User provided reference genes

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