Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_3G012810 Cucumis sativus L. HOM05D025894 ORTHO05D010081 0.0e+00 1275.8 806 100.0
MELO3C006492.2 Cucumis melo HOM05D025894 ORTHO05D010081 1.1e-305 1053.1 812 85.3
ClCG05G004780 Citrullus lanatus HOM05D025894 ORTHO05D010081 1.5e-254 883.2 837 69.7
Sed0006870 Sechium edule HOM05D025894 ORTHO05D010081 3.3e-129 466.8 997 47.0
Potri.008G159200 Populus trichocarpa HOM05D008144 ORTHO05D010081 2.4e-23 115.2 181 39.8
Duzib212G0503 Durio zibethinus HOM05D008144 ORTHO05D010081 1.9e-20 105.5 173 40.5
Thecc.04G241000 Theobroma cacao HOM05D008144 ORTHO05D010081 7.2e-20 103.6 172 40.1
Atru.chr4.2325 Acer truncatum HOM05D008144 ORTHO05D010081 4.7e-19 100.9 365 30.4
COL.COLO4_13184 Corchorus olitorius HOM05D008144 ORTHO05D010081 8.0e-19 100.1 177 39.0
TPR.G32783 Trifolium pratense HOM05D008144 ORTHO05D010081 7.5e-17 93.6 179 37.4
Duzib151G0265 Durio zibethinus HOM05D008144 ORTHO05D010081 2.8e-16 91.7 189 36.0
FAN17G0986 Fragaria x ananassa HOM05D008144 ORTHO05D010081 2.8e-16 91.7 165 38.8
FAN17G1249 Fragaria x ananassa HOM05D008144 ORTHO05D010081 2.8e-16 91.7 165 38.8
Potri.010G081000 Populus trichocarpa HOM05D008144 ORTHO05D010081 4.9e-16 90.9 540 25.9
Manes.03G171900 Manihot esculenta HOM05D008144 ORTHO05D010081 1.4e-15 89.4 437 26.8
RcHm_v2.0_Chr4g0388601 Rosa chinensis HOM05D008144 ORTHO05D010081 1.4e-15 89.4 166 36.7
VMungo0720G0769 Vigna mungo HOM05D008144 ORTHO05D010081 7.0e-15 87.0 169 33.7
MD16G1202000 Malus domestica HOM05D008144 ORTHO05D010081 1.6e-14 85.9 181 35.4
Sabra08G0121300 Salix brachista HOM05D008144 ORTHO05D010081 2.7e-14 85.1 492 25.8
Psat6g103240 Pisum sativum HOM05D008144 ORTHO05D010081 3.5e-14 84.7 171 34.5
Cpa.g.sc44.134 Carica papaya HOM05D008144 ORTHO05D010081 1.0e-13 83.2 161 37.9
Glyma.02G002200 Glycine max HOM05D008144 ORTHO05D010081 1.3e-13 82.8 185 34.1
CANSAT78G0891 Cannabis sativa HOM05D008144 ORTHO05D010081 1.7e-13 82.4 484 27.1
Ciclev10004664m.g Citrus clementina HOM05D008144 ORTHO05D010081 1.7e-13 82.4 517 25.9
CSS0041819 Camellia sinensis var. sinensis HOM05D008144 ORTHO05D010081 3.8e-13 81.3 415 26.0
Phvul.007G278800 Phaseolus vulgaris HOM05D008144 ORTHO05D010081 3.8e-13 81.3 162 34.6
Prupe.1G023500 Prunus persica HOM05D008144 ORTHO05D010081 6.6e-13 80.5 572 24.7
Dinv44593 Davidia involucrata HOM05D008144 ORTHO05D010081 8.6e-13 80.1 188 32.4
FAN22G0807 Fragaria x ananassa HOM05D008144 ORTHO05D010081 1.9e-12 79.0 345 28.1
Gohir.D02G041500 Gossypium hirsutum HOM05D008144 ORTHO05D010081 3.3e-12 78.2 169 35.5
Gorai.005G045900 Gossypium raimondii HOM05D008144 ORTHO05D010081 3.3e-12 78.2 169 35.5
Gohir.A02G034700 Gossypium hirsutum HOM05D008144 ORTHO05D010081 9.5e-12 76.6 169 34.9
Dinv14059 Davidia involucrata HOM05D008144 ORTHO05D010081 1.2e-11 76.3 412 26.2
MD13G1201700 Malus domestica HOM05D008144 ORTHO05D010081 3.6e-11 74.7 379 28.0
Haze_11249 Corylus avellana HOM05D008144 ORTHO05D010081 1.0e-10 73.2 398 26.4
Medtr1g041300 Medicago truncatula HOM05D008144 ORTHO05D010081 1.8e-10 72.4 486 23.3
FvH4_4g01740 Fragaria vesca HOM05D008144 ORTHO05D010081 2.3e-10 72.0 412 26.2
FAN12G1940 Fragaria x ananassa HOM05D008144 ORTHO05D010081 3.0e-10 71.6 436 26.1
QL06p000574 Quercus lobata HOM05D008144 ORTHO05D010081 1.5e-09 69.3 900 23.7
TWI73G1171 Tripterygium wilfordii HOM05D008144 ORTHO05D010081 9.8e-09 66.6 183 31.1
GSVIVG01018069001 Vitis vinifera HOM05D008144 ORTHO05D010081 4.9e-08 64.3 404 26.7
Nitab4.5_0000224g0080 Nicotiana tabacum HOM05D014400 ORTHO05D010081 1.4e-07 62.8 160 31.9
Actinidia04502 Actinidia chinensis HOM05D008144 ORTHO05D010081 5.4e-07 60.8 183 29.0
AL7G41440 Arabidopsis lyrata HOM05D011210 ORTHO05D013204 5.4e-07 60.8 144 38.2
PGR004G2389 Punica granatum HOM05D008144 ORTHO05D010081 7.0e-07 60.5 157 33.1
Peaxi162Scf00758g00019 Petunia axillaris HOM05D014400 ORTHO05D010081 1.6e-06 59.3 163 28.8
Lj6g0001132 Lotus japonicus HOM05D008144 ORTHO05D010081 2.7e-06 58.5 173 28.9
THA.LOC104809081 Tarenaya hassleriana HOM05D011210 ORTHO05D013204 5.9e-06 57.4 166 28.3
Lalb_Chr03g0037551 Lupinus albus HOM05D008144 ORTHO05D010081 7.8e-06 57.0 406 24.6


User provided reference genes

Program Settings