Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_3G011690 Cucumis sativus L. HOM05D006857 ORTHO05D008679 4.5e-255 884.0 428 100.0
MELO3C006377.2 Cucumis melo HOM05D006857 ORTHO05D008679 2.3e-238 828.6 444 91.9
ClCG05G004000 Citrullus lanatus HOM05D006857 ORTHO05D008679 1.1e-227 793.1 421 90.5
Sed0022275 Sechium edule HOM05D006857 ORTHO05D008679 6.9e-195 684.1 408 82.4
Cfa014781 Carpinus fangiana HOM05D006857 ORTHO05D008679 1.3e-180 636.7 417 72.9
QL06p021004 Quercus lobata HOM05D006857 ORTHO05D008679 3.8e-177 625.2 433 70.2
CiPaw.02G107000 Carya illinoinensis HOM05D006857 ORTHO05D008679 9.4e-176 620.5 432 70.1
Glyma.10G132600 Glycine max HOM05D006857 ORTHO05D008679 1.0e-174 617.1 426 69.7
MD16G1226200 Malus domestica HOM05D006857 ORTHO05D008679 1.9e-173 612.8 428 70.1
CANSAT78G0655 Cannabis sativa HOM05D006857 ORTHO05D008679 1.4e-171 606.7 431 67.7
CSS0034732 Camellia sinensis var. sinensis HOM05D006857 ORTHO05D008679 1.5e-170 603.2 417 69.3
Prupe.1G048100 Prunus persica HOM05D006857 ORTHO05D008679 2.0e-170 602.8 433 67.0
VMungo0720G0849 Vigna mungo HOM05D006857 ORTHO05D008679 7.7e-170 600.9 427 69.3
Lalb_Chr03g0036951 Lupinus albus HOM05D006857 ORTHO05D008679 1.4e-168 596.7 436 66.5
RcHm_v2.0_Chr4g0395361 Rosa chinensis HOM05D006857 ORTHO05D008679 1.9e-168 596.3 429 66.4
Cpa.g.sc44.1 Carica papaya HOM05D006857 ORTHO05D008679 3.2e-168 595.5 422 68.2
MD07G1289900 Malus domestica HOM05D006857 ORTHO05D008679 3.2e-168 595.5 429 68.5
TAR362G0064 Trochodendron aralioides HOM05D006857 ORTHO05D008679 9.4e-168 594.0 435 67.1
Nn1g02958 Nelumbo nucifera HOM05D006857 ORTHO05D008679 3.9e-166 588.6 434 65.4
Psat7g076560 Pisum sativum HOM05D006857 ORTHO05D008679 5.1e-166 588.2 435 65.1
Actinidia35816 Actinidia chinensis HOM05D006857 ORTHO05D008679 9.7e-165 583.9 428 66.8
Medtr8g085480 Medicago truncatula HOM05D006857 ORTHO05D008679 2.2e-164 582.8 434 65.4
arahy.Tifrunner.gnm1.ann1.SJBM1Y Arachis hypogaea HOM05D006857 ORTHO05D008679 6.3e-164 581.3 435 64.1
FvH4_4g04570 Fragaria vesca HOM05D006857 ORTHO05D008679 1.4e-163 580.1 428 64.0
Rhsim04G0172300 Rhododendron simsii HOM05D006857 ORTHO05D008679 1.8e-163 579.7 426 68.3
arahy.Tifrunner.gnm1.ann1.I81STG Arachis hypogaea HOM05D006857 ORTHO05D008679 2.4e-163 579.3 435 63.9
vmacro08554 Vaccinium macrocarpon HOM05D006857 ORTHO05D008679 5.3e-163 578.2 428 67.5
GSVIVG01027915001 Vitis vinifera HOM05D006857 ORTHO05D008679 7.0e-163 577.8 428 66.4
PGR031G1141 Punica granatum HOM05D006857 ORTHO05D008679 9.1e-163 577.4 431 66.6
PGR031G1585 Punica granatum HOM05D006857 ORTHO05D008679 9.1e-163 577.4 431 66.6
Haze_11458 Corylus avellana HOM05D006857 ORTHO05D008679 1.2e-162 577.0 397 70.3
Ca_17963_v3 Cicer arietinum L. HOM05D006857 ORTHO05D008679 1.5e-162 576.6 435 65.1
FAN17G2805 Fragaria x ananassa HOM05D006857 ORTHO05D008679 3.5e-162 575.5 421 63.7
Thecc.04G264000 Theobroma cacao HOM05D006857 ORTHO05D008679 3.8e-161 572.0 435 62.5
Manes.03G158900 Manihot esculenta HOM05D006857 ORTHO05D008679 1.6e-159 566.6 435 65.5
Gorai.011G177900 Gossypium raimondii HOM05D006857 ORTHO05D008679 8.0e-159 564.3 436 62.2
Gohir.D10G158400 Gossypium hirsutum HOM05D006857 ORTHO05D008679 1.0e-158 563.9 436 62.2
Lj6g0000537 Lotus japonicus HOM05D006857 ORTHO05D008679 2.3e-158 562.8 434 63.8
TWI09G0838 Tripterygium wilfordii HOM05D006857 ORTHO05D008679 3.0e-158 562.4 434 62.9
Duzib151G0230 Durio zibethinus HOM05D006857 ORTHO05D008679 9.7e-157 557.4 434 60.8
Cc03_g06310 Coffea canephora HOM05D006857 ORTHO05D008679 5.3e-155 551.6 416 63.5
Sabra08G0131200 Salix brachista HOM05D006857 ORTHO05D008679 5.3e-155 551.6 438 63.9
Sc19g0005530 Simmondsia chinensis HOM05D006857 ORTHO05D008679 1.6e-154 550.1 451 61.6
Potri.008G171900 Populus trichocarpa HOM05D006857 ORTHO05D008679 7.7e-154 547.7 438 62.8
Ciclev10005032m.g Citrus clementina HOM05D006857 ORTHO05D008679 3.8e-153 545.4 429 64.1
Hund20529 Selenicereus undatus HOM05D006857 ORTHO05D008679 6.5e-153 544.7 418 62.4
Nitab4.5_0013063g0010 Nicotiana tabacum HOM05D006857 ORTHO05D008679 4.2e-152 542.0 416 63.0
Nitab4.5_0000194g0200 Nicotiana tabacum HOM05D006857 ORTHO05D008679 8.0e-151 537.7 416 61.5
Atru.chr4.1915 Acer truncatum HOM05D006857 ORTHO05D008679 1.0e-150 537.3 439 62.4
Aqoxy2G03746 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 6.7e-150 534.6 431 59.4
Lj6C621T18 Lonicera japonica HOM05D006857 ORTHO05D008679 1.2e-149 533.9 515 54.2
COL.COLO4_15963 Corchorus olitorius HOM05D006857 ORTHO05D008679 1.5e-149 533.5 400 64.5
HanXRQChr06g0182801 Helianthus annuus HOM05D006857 ORTHO05D008679 3.1e-147 525.8 416 63.2
Aqoxy7G02302 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 4.1e-147 525.4 431 58.2
Aqoxy7G02465 Aquilegia oxysepala HOM05D006857 ORTHO05D008679 7.0e-147 524.6 431 58.5
Solyc09g090690.4 Solanum lycopersicum HOM05D006857 ORTHO05D008679 1.7e-145 520.0 418 60.3
Lsat_1_v5_gn_2_41360 Lactuca sativa HOM05D006857 ORTHO05D008679 2.2e-145 519.6 415 62.9
PGSC0003DMG400017145 Solanum tuberosum HOM05D006857 ORTHO05D008679 5.0e-145 518.5 416 60.3
EL10Ac3g06657 Beta vulgaris HOM05D006857 ORTHO05D008679 1.1e-144 517.3 432 58.3
Sopen09g033630 Solanum pennellii HOM05D006857 ORTHO05D008679 1.1e-144 517.3 418 60.0
AUR62015271 Chenopodium quinoa HOM05D006857 ORTHO05D008679 2.5e-144 516.2 418 58.6
Eucgr.H00127 Eucalyptus grandis HOM05D006857 ORTHO05D008679 1.6e-143 513.5 391 62.7
PSO017G4333 Papaver somniferum HOM05D006857 ORTHO05D008679 6.1e-143 511.5 413 61.5
CAN.G524.29 Capsicum annuum HOM05D006857 ORTHO05D008679 3.0e-142 509.2 429 58.3
Phvul.007G231500 Phaseolus vulgaris HOM05D006857 ORTHO05D008679 8.8e-142 507.7 353 69.4
PSO063G2784 Papaver somniferum HOM05D006857 ORTHO05D008679 2.0e-141 506.5 413 60.8
Ah.04g153670 Amaranthus hybridus HOM05D006857 ORTHO05D008679 2.6e-141 506.1 418 60.0
Migut.G00555 Erythranthe guttata HOM05D006857 ORTHO05D008679 5.7e-141 505.0 417 60.0
AUR62018068 Chenopodium quinoa HOM05D006857 ORTHO05D008679 2.9e-137 492.7 398 58.5
Hma1.2p1_0112F.1_g054740 Hydrangea macrophylla HOM05D006857 ORTHO05D008679 5.0e-137 491.9 355 66.5
Peaxi162Scf00153g01846 Petunia axillaris HOM05D006857 ORTHO05D008679 3.3e-136 489.2 417 59.2
Aa31LG9G4440 Aethionema arabicum HOM05D006857 ORTHO05D008679 1.4e-134 483.8 418 57.2
ATR0787G032 Amborella trichopoda HOM05D006857 ORTHO05D008679 2.3e-134 483.0 423 57.9
CARHR218870 Cardamine hirsuta HOM05D006857 ORTHO05D008679 1.3e-132 477.2 417 57.8
THA.LOC104804575 Tarenaya hassleriana HOM05D006857 ORTHO05D008679 1.3e-132 477.2 416 58.4
SGA_v2.0_scaffold67G22686 Striga asiatica HOM05D006857 ORTHO05D008679 2.2e-132 476.5 424 56.8
SalBow3G1529 Salvia bowleyana HOM05D006857 ORTHO05D008679 1.1e-131 474.2 413 56.4
ECA234G1558 Erigeron canadensis HOM05D006857 ORTHO05D005985 3.1e-131 472.6 367 62.9
Sp7g10880 Schrenkiella parvula HOM05D006857 ORTHO05D008679 5.4e-131 471.9 417 58.5
C06p17330 Brassica napus HOM05D006857 ORTHO05D008679 1.0e-129 467.6 417 56.8
BolC6t36929H Brassica oleracea HOM05D006857 ORTHO05D008679 1.0e-129 467.6 417 56.8
A05p16520 Brassica napus HOM05D006857 ORTHO05D008679 4.3e-128 462.2 415 55.9
BraA05t20557Z Brassica rapa HOM05D006857 ORTHO05D008679 4.3e-128 462.2 415 55.9
DCAR_002298 Daucus carota HOM05D004684 ORTHO05D006904 5.6e-128 461.8 357 61.3
AL9U10380 Arabidopsis lyrata HOM05D006857 ORTHO05D008679 9.5e-128 461.1 405 57.3
Carub.0007s2931 Capsella rubella HOM05D006857 ORTHO05D008679 1.4e-126 457.2 432 55.8
AT4G13330 Arabidopsis thaliana HOM05D006857 ORTHO05D008679 4.0e-126 455.7 405 56.5
Thhalv10026810m.g Eutrema salsugineum HOM05D006857 ORTHO05D008679 1.2e-125 454.1 417 56.1
Os04g0510700 Oryza sativa ssp. japonica HOM05D006857 ORTHO05D008679 1.1e-123 447.6 419 54.9
MSTRG.4172 Avicennia marina HOM05D006857 ORTHO05D008679 1.4e-123 447.2 368 60.3
Oeu002936.2 Olea europaea HOM05D006857 ORTHO05D008679 2.0e-122 443.4 644 40.8
Zm00001eb077400 Zea mays HOM05D006857 ORTHO05D008679 1.4e-118 430.6 413 53.5
TPR.G11804 Trifolium pratense HOM05D006857 ORTHO05D008679 3.1e-118 429.5 305 66.9
Dinv27112 Davidia involucrata HOM05D006857 ORTHO05D008679 4.7e-111 405.6 303 66.0
CDE02G1483 Ceratophyllum demersum HOM05D006857 ORTHO05D008679 3.7e-108 396.0 420 49.5
MBI10_g35430_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 2.9e-84 316.6 292 55.8
Pp3c15_24290 Physcomitrium patens HOM05D006857 ORTHO05D008679 4.0e-78 296.2 430 39.1
Mapoly0127s0023 Marchantia polymorpha HOM05D006857 ORTHO05D008679 6.2e-71 272.3 456 38.6
MBI10_g35433_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 1.4e-70 271.2 236 59.7
SHI00774 Sapria himalayana HOM05D006857 ORTHO05D008679 1.2e-69 268.1 272 52.6
BcaC08g44309 Brassica carinata HOM05D006857 ORTHO05D008679 1.4e-59 234.6 198 60.6
unitig_748.g8298 Utricularia gibba HOM05D006857 ORTHO05D008679 1.8e-57 227.6 208 51.4
BcaC08g44310 Brassica carinata HOM05D006857 ORTHO05D008679 3.9e-57 226.5 209 53.1
unitig_748.g8297 Utricularia gibba HOM05D006857 ORTHO05D008679 2.1e-50 204.1 197 52.3
CDE08G1596 Ceratophyllum demersum HOM05D006857 ORTHO05D008679 9.1e-46 188.7 179 53.1
MBI10_g35434_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 2.1e-42 177.6 136 60.3
FAN13G3085 Fragaria x ananassa HOM05D006857 ORTHO05D008679 4.1e-38 163.3 123 61.8
FvH4_5g26950 Fragaria vesca HOM05D006857 ORTHO05D008679 1.2e-37 161.8 113 63.7
AagrBONN_evm.TU.Sc2ySwM_117.1189 Anthoceros agrestis HOM05D006857 ORTHO05D008679 1.3e-36 158.3 239 40.2
TPR.G25294 Trifolium pratense HOM05D006857 ORTHO05D008679 1.4e-30 138.3 110 62.7
SEGI_21065 Sequoiadendron giganteum HOM05D006857 ORTHO05D008679 4.0e-17 93.6 100 46.0
SHI00775 Sapria himalayana HOM05D000105 ORTHO05D000023 2.5e-11 74.3 105 38.1
MD13G1221100 Malus domestica HOM05D006857 ORTHO05D008679 3.3e-11 73.9 98 43.9
MBI10_g35432_MAGBIO Magnolia biondii HOM05D006857 ORTHO05D008679 9.5e-11 72.4 60 60.0
MCO09G143 Micromonas commoda HOM05D006857 ORTHO05D008679 1.8e-09 68.2 234 29.9
HanXRQChr11g0332551 Helianthus annuus HOM05D006857 ORTHO05D008679 7.5e-08 62.8 52 55.8
ATR0787G039 Amborella trichopoda HOM05D006857 ORTHO05D008679 4.9e-07 60.1 46 58.7
MCO07G483 Micromonas commoda HOM05D006857 ORTHO05D008679 4.1e-06 57.0 242 26.0


User provided reference genes

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