Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_3G011380 Cucumis sativus L. HOM05D006670 ORTHO05D008715 1.3e-160 569.7 301 100.0
MELO3C006346.2 Cucumis melo HOM05D006670 ORTHO05D008715 8.4e-155 550.4 300 97.0
ClCG05G003670 Citrullus lanatus HOM05D006670 ORTHO05D008715 6.0e-137 491.1 281 92.2
Sed0004390 Sechium edule HOM05D006670 ORTHO05D008715 5.6e-127 458.0 281 85.4
Potri.003G174400 Populus trichocarpa HOM05D006670 ORTHO05D008715 1.0e-112 410.6 273 78.0
Haze_11539 Corylus avellana HOM05D006670 ORTHO05D008715 4.3e-111 405.2 280 75.7
Manes.15G049800 Manihot esculenta HOM05D006670 ORTHO05D008715 4.3e-111 405.2 270 77.0
Prupe.1G056900 Prunus persica HOM05D006670 ORTHO05D008715 5.7e-111 404.8 280 73.9
Cfa014868 Carpinus fangiana HOM05D006670 ORTHO05D008715 9.7e-111 404.1 267 77.5
MD13G1229700 Malus domestica HOM05D006670 ORTHO05D008715 1.1e-109 400.6 279 74.9
Sabra03G0127900 Salix brachista HOM05D006670 ORTHO05D008715 1.8e-109 399.8 273 75.8
Manes.03G154700 Manihot esculenta HOM05D006670 ORTHO05D008715 2.4e-109 399.4 269 77.7
QL06p022765 Quercus lobata HOM05D006670 ORTHO05D008715 1.2e-108 397.1 265 77.7
COL.COLO4_05724 Corchorus olitorius HOM05D006670 ORTHO05D008715 1.5e-108 396.7 272 74.3
Dinv27152 Davidia involucrata HOM05D006670 ORTHO05D008715 1.5e-108 396.7 274 74.8
RcHm_v2.0_Chr4g0396631 Rosa chinensis HOM05D006670 ORTHO05D008715 3.4e-108 395.6 274 73.4
CSS0048127 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 5.9e-108 394.8 279 72.4
CSS0047689 Camellia sinensis var. sinensis HOM05D006670 ORTHO05D008715 1.0e-107 394.0 279 72.0
Rhsim09G0046600 Rhododendron simsii HOM05D006670 ORTHO05D008715 1.0e-107 394.0 278 73.0
CiPaw.01G205600 Carya illinoinensis HOM05D006670 ORTHO05D008715 8.5e-107 391.0 282 72.3
Cpa.g.sc59.72 Carica papaya HOM05D006670 ORTHO05D008715 1.9e-106 389.8 266 74.4
FvH4_4g05510 Fragaria vesca HOM05D006670 ORTHO05D008715 2.7e-105 386.0 273 71.8
CANSAT78G1187 Cannabis sativa HOM05D006670 ORTHO05D008715 3.6e-105 385.6 266 74.4
Gorai.011G163000 Gossypium raimondii HOM05D006670 ORTHO05D008715 3.6e-105 385.6 274 71.5
FAN22G1637 Fragaria x ananassa HOM05D006670 ORTHO05D008715 4.7e-105 385.2 273 71.1
PGR083G1840 Punica granatum HOM05D006670 ORTHO05D008715 4.7e-105 385.2 267 72.7
Ciclev10005609m.g Citrus clementina HOM05D006670 ORTHO05D008715 6.1e-105 384.8 272 72.4
Gohir.D10G145900 Gossypium hirsutum HOM05D006670 ORTHO05D008715 6.1e-105 384.8 274 71.5
FAN07G0632 Fragaria x ananassa HOM05D006670 ORTHO05D008715 1.0e-104 384.0 273 71.8
FAN12G2738 Fragaria x ananassa HOM05D006670 ORTHO05D008715 1.0e-104 384.0 273 71.4
Aqoxy2G03824 Aquilegia oxysepala HOM05D006670 ORTHO05D008715 3.9e-104 382.1 277 70.0
Rhsim09G0047600 Rhododendron simsii HOM05D006670 ORTHO05D008715 3.9e-104 382.1 278 70.5
Thecc.04G214700 Theobroma cacao HOM05D006670 ORTHO05D008715 5.1e-104 381.7 272 72.1
MBI10_g16834_MAGBIO Magnolia biondii HOM05D006670 ORTHO05D008715 6.7e-104 381.3 274 70.4
DCAR_024309 Daucus carota HOM05D006670 ORTHO05D008715 1.5e-103 380.2 273 71.4
TAR636G1307 Trochodendron aralioides HOM05D006670 ORTHO05D008715 2.0e-103 379.8 274 70.8
Gohir.A10G120500 Gossypium hirsutum HOM05D006670 ORTHO05D008715 4.4e-103 378.6 274 70.1
HanXRQChr01g0022661 Helianthus annuus HOM05D006670 ORTHO05D008715 1.3e-102 377.1 272 70.6
Sp3g21930 Schrenkiella parvula HOM05D006670 ORTHO05D008715 4.8e-102 375.2 274 70.1
AUR62035928 Chenopodium quinoa HOM05D006670 ORTHO05D008715 1.1e-101 374.0 275 70.9
PSO063G6527 Papaver somniferum HOM05D006670 ORTHO05D008715 1.1e-101 374.0 273 68.5
Duzib212G0230 Durio zibethinus HOM05D006670 ORTHO05D008715 1.4e-101 373.6 270 71.1
PSO017G1158 Papaver somniferum HOM05D006670 ORTHO05D008715 5.3e-101 371.7 282 67.0
Thhalv10002635m.g Eutrema salsugineum HOM05D006670 ORTHO05D008715 6.9e-101 371.3 272 69.1
Phvul.007G238000 Phaseolus vulgaris HOM05D006670 ORTHO05D008715 1.2e-100 370.5 274 70.1
VMungo0720G2028 Vigna mungo HOM05D006670 ORTHO05D008715 1.2e-100 370.5 276 70.7
arahy.Tifrunner.gnm1.ann1.M1QCRY Arachis hypogaea HOM05D006670 ORTHO05D008715 2.0e-100 369.8 285 69.5
CARHR100200 Cardamine hirsuta HOM05D006670 ORTHO05D008715 3.4e-100 369.0 274 69.3
AL3G39350 Arabidopsis lyrata HOM05D006670 ORTHO05D008715 4.5e-100 368.6 274 67.9
BcaB06g26594 Brassica carinata HOM05D006670 ORTHO05D008715 4.5e-100 368.6 280 67.9
Lalb_Chr01g0011161 Lupinus albus HOM05D006670 ORTHO05D008715 4.5e-100 368.6 267 72.7
Ah.04g153360 Amaranthus hybridus HOM05D006670 ORTHO05D008715 5.9e-100 368.2 271 72.0
Ca_11808_v3 Cicer arietinum L. HOM05D006670 ORTHO05D008715 5.9e-100 368.2 291 68.4
arahy.Tifrunner.gnm1.ann1.CI907D Arachis hypogaea HOM05D006670 ORTHO05D008715 7.7e-100 367.9 285 69.1
Glyma.10G127400 Glycine max HOM05D006670 ORTHO05D008715 1.0e-99 367.5 275 70.2
ECA248G0542 Erigeron canadensis HOM05D006670 ORTHO05D008715 1.7e-99 366.7 278 65.8
Lj6g0025132 Lotus japonicus HOM05D006670 ORTHO05D008715 1.7e-99 366.7 277 70.0
AUR62035321 Chenopodium quinoa HOM05D006670 ORTHO05D008715 2.2e-99 366.3 275 69.5
Lsat_1_v5_gn_0_4721 Lactuca sativa HOM05D006670 ORTHO05D008715 2.2e-99 366.3 275 67.6
Sc13g0002920 Simmondsia chinensis HOM05D006670 ORTHO05D008715 2.9e-99 365.9 267 71.2
vmacro00519 Vaccinium macrocarpon HOM05D006670 ORTHO05D008715 5.0e-99 365.2 323 62.2
A07p08240 Brassica napus HOM05D006670 ORTHO05D008715 1.1e-98 364.0 271 68.6
Actinidia25088 Actinidia chinensis HOM05D006670 ORTHO05D008715 1.4e-98 363.6 243 76.1
Psat6g047400 Pisum sativum HOM05D006670 ORTHO05D008715 1.4e-98 363.6 275 69.5
Carub.0003s2449 Capsella rubella HOM05D006670 ORTHO05D008715 2.5e-98 362.8 274 67.5
AT3G24030 Arabidopsis thaliana HOM05D006670 ORTHO05D008715 4.2e-98 362.1 274 66.8
Hund24851 Selenicereus undatus HOM05D006670 ORTHO05D008715 4.2e-98 362.1 278 69.1
BraA07t28607Z Brassica rapa HOM05D006670 ORTHO05D008715 1.6e-97 360.1 271 67.5
TPR.G11296 Trifolium pratense HOM05D006670 ORTHO05D008715 1.6e-97 360.1 277 69.0
Sopen05g031980 Solanum pennellii HOM05D006670 ORTHO05D008715 2.7e-97 359.4 268 70.1
MSTRG.4202 Avicennia marina HOM05D006670 ORTHO05D008715 3.6e-97 359.0 291 66.7
BolC7t41764H Brassica oleracea HOM05D006670 ORTHO05D008715 4.7e-97 358.6 271 67.5
THA.LOC104808732 Tarenaya hassleriana HOM05D006670 ORTHO05D008715 8.0e-97 357.8 262 70.6
BcaC06g35628 Brassica carinata HOM05D006670 ORTHO05D008715 2.3e-96 356.3 271 67.5
C07p12780 Brassica napus HOM05D006670 ORTHO05D008715 2.3e-96 356.3 271 67.5
Eucgr.H02870 Eucalyptus grandis HOM05D006670 ORTHO05D008715 2.0e-95 353.2 267 69.7
Atru.chr4.1814 Acer truncatum HOM05D006670 ORTHO05D008715 3.3e-95 352.4 281 67.6
Medtr1g046510 Medicago truncatula HOM05D006670 ORTHO05D008715 9.7e-95 350.9 278 66.9
Lju414A3G25 Lonicera japonica HOM05D006670 ORTHO05D008715 1.3e-94 350.5 239 76.2
Peaxi162Scf00536g00711 Petunia axillaris HOM05D006670 ORTHO05D008715 1.3e-94 350.5 269 68.0
ATR0787G198 Amborella trichopoda HOM05D006670 ORTHO05D008715 8.2e-94 347.8 271 65.3
Medtr1g046790 Medicago truncatula HOM05D006670 ORTHO05D008715 8.2e-94 347.8 275 66.9
Migut.G00614 Erythranthe guttata HOM05D006670 ORTHO05D008715 4.1e-93 345.5 277 66.1
SGA_v2.0_scaffold57G20164 Striga asiatica HOM05D006670 ORTHO05D008715 4.5e-92 342.0 265 66.0
Nn3g19866 Nelumbo nucifera HOM05D006670 ORTHO05D008715 1.5e-90 337.0 232 73.3
GSVIVG01029032001 Vitis vinifera HOM05D006670 ORTHO05D008715 5.5e-90 335.1 223 77.6
SHI00002 Sapria himalayana HOM05D006670 ORTHO05D008715 1.6e-89 333.6 294 60.5
Nitab4.5_0001769g0060 Nicotiana tabacum HOM05D006670 ORTHO05D008715 4.7e-89 332.0 273 64.8
Zm00001eb341310 Zea mays HOM05D006670 ORTHO05D008715 6.1e-89 331.6 275 65.5
Nitab4.5_0012036g0010 Nicotiana tabacum HOM05D006670 ORTHO05D008715 2.6e-87 326.2 268 64.2
SEGI_39672 Sequoiadendron giganteum HOM05D006670 ORTHO05D008715 3.3e-87 325.9 272 62.5
PGSC0003DMG400027217 Solanum tuberosum HOM05D006670 ORTHO05D008715 4.8e-86 322.0 241 69.7
Cc03_g07080 Coffea canephora HOM05D006670 ORTHO05D008715 1.2e-84 317.4 225 71.6
Mapoly0087s0052 Marchantia polymorpha HOM05D006670 ORTHO05D008715 7.7e-84 314.7 267 59.9
Pp3c9_10780 Physcomitrium patens HOM05D006670 ORTHO05D008715 1.5e-82 310.5 267 59.9
CDE01G0405 Ceratophyllum demersum HOM05D007853 ORTHO05D009873 2.3e-80 303.1 232 66.8
Oeu022324.1 Olea europaea HOM05D006670 ORTHO05D008715 5.2e-80 302.0 241 66.0
AagrBONN_evm.TU.Sc2ySwM_228.2900 Anthoceros agrestis HOM05D006670 ORTHO05D008715 6.8e-80 301.6 257 60.3
SMO137G0262 Selaginella moellendorffii HOM05D006670 ORTHO05D008715 2.0e-79 300.1 262 61.5
unitig_747.g21700 Utricularia gibba HOM05D006670 ORTHO05D008715 4.8e-78 295.4 391 44.8
RhsimUnG0181700 Rhododendron simsii HOM05D006670 ORTHO05D008715 1.1e-77 294.3 278 57.9
SMO134G0250 Selaginella moellendorffii HOM05D006670 ORTHO05D008715 4.5e-68 262.3 275 54.2
EL10Ac3g06772 Beta vulgaris HOM05D006670 ORTHO05D008715 1.8e-64 250.4 237 58.2
Cre06.g255350 Chlamydomonas reinhardtii HOM05D006670 ORTHO05D008715 3.0e-64 249.6 260 53.5
Psat7g020640 Pisum sativum HOM05D006670 ORTHO05D008715 8.9e-56 221.5 184 67.4
Dinv44414 Davidia involucrata HOM05D006670 ORTHO05D008715 1.2e-55 221.1 149 75.8
Psat4g139560 Pisum sativum HOM05D006670 ORTHO05D000720 3.9e-51 206.1 220 54.1
Rhsim09G0047300 Rhododendron simsii HOM05D000107 ORTHO05D000062 6.8e-48 195.3 149 65.8
Lju414A3G24 Lonicera japonica HOM05D006670 ORTHO05D008715 4.4e-47 192.6 201 58.2
Psat0s5229g0080 Pisum sativum HOM05D006670 ORTHO05D006513 1.2e-44 184.5 217 49.8
CAN.G305.17 Capsicum annuum HOM05D006670 ORTHO05D008715 4.6e-44 182.6 133 65.4
Os01g0363600 Oryza sativa ssp. japonica HOM05D006670 ORTHO05D008715 4.6e-44 182.6 144 60.4
Potri.001G053900 Populus trichocarpa HOM05D006670 ORTHO05D008715 1.1e-42 177.9 122 77.9
CAN.G305.16 Capsicum annuum HOM05D006670 ORTHO05D008715 4.0e-40 169.5 139 66.9
Psat4g139640 Pisum sativum HOM05D006670 ORTHO05D002176 4.7e-33 146.0 147 59.9
Sabra01G0038200 Salix brachista HOM05D006670 ORTHO05D349611 5.8e-31 139.0 213 45.5
Lsat_1_v5_gn_5_180420 Lactuca sativa HOM05D006670 ORTHO05D008715 1.0e-27 128.3 119 58.8
Migut.G00612 Erythranthe guttata HOM05D006670 ORTHO05D008715 1.1e-26 124.8 131 57.3
PGSC0003DMG402027165 Solanum tuberosum HOM05D006670 ORTHO05D008715 1.8e-24 117.5 81 75.3
FAN17G2931 Fragaria x ananassa HOM05D006670 ORTHO05D008715 8.4e-22 108.6 80 70.0
Cfa024720 Carpinus fangiana HOM05D005536 ORTHO05D006999 1.3e-19 101.3 245 33.1
Cpa.g.sc59.70 Carica papaya HOM05D006670 ORTHO05D119377 1.6e-12 77.8 108 44.4
Psat5g196680 Pisum sativum HOM05D006670 ORTHO05D008715 4.8e-09 66.2 48 62.5


User provided reference genes

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