Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_3G011080 Cucumis sativus L. HOM05D002428 ORTHO05D008664 5.1e-184 647.9 400 100.0
MELO3C006321.2 Cucumis melo HOM05D002428 ORTHO05D008664 8.2e-174 614.0 400 90.0
ClCG05G003410 Citrullus lanatus HOM05D002428 ORTHO05D008664 2.2e-155 552.7 423 84.6
Sed0003366 Sechium edule HOM05D002428 ORTHO05D008664 3.4e-143 512.3 403 79.2
CiPaw.01G122800 Carya illinoinensis HOM05D002428 ORTHO05D008664 2.3e-83 313.5 404 55.0
Dinv29583 Davidia involucrata HOM05D002428 ORTHO05D005085 2.4e-80 303.5 388 53.6
Thecc.04G206600 Theobroma cacao HOM05D002428 ORTHO05D008664 2.0e-79 300.4 380 57.9
Ciclev10005170m.g Citrus clementina HOM05D002428 ORTHO05D008664 3.4e-79 299.7 379 56.5
Prupe.1G004900 Prunus persica HOM05D002428 ORTHO05D008664 4.9e-78 295.8 389 55.5
Aa31LG9G3990 Aethionema arabicum HOM05D002428 ORTHO05D008664 2.4e-77 293.5 379 55.1
Cpa.g.sc59.123 Carica papaya HOM05D002428 ORTHO05D008664 4.2e-77 292.7 371 59.8
COL.COLO4_20264 Corchorus olitorius HOM05D002428 ORTHO05D008664 9.3e-77 291.6 385 56.1
Gohir.D10G143300 Gossypium hirsutum HOM05D002428 ORTHO05D008664 4.6e-76 289.3 392 55.6
Dinv38250 Davidia involucrata HOM05D002428 ORTHO05D008664 6.0e-76 288.9 396 54.3
THA.LOC104808718 Tarenaya hassleriana HOM05D002428 ORTHO05D008664 3.9e-75 286.2 380 55.0
TAR365G0194 Trochodendron aralioides HOM05D002428 ORTHO05D008664 8.7e-75 285.0 300 57.0
Oeu006723.1 Olea europaea HOM05D002428 ORTHO05D008664 1.5e-74 284.3 396 54.8
Duzib151G0475 Durio zibethinus HOM05D002428 ORTHO05D008664 2.5e-74 283.5 382 56.0
Haze_11594 Corylus avellana HOM05D002428 ORTHO05D008664 3.3e-74 283.1 493 45.8
Manes.15G051900 Manihot esculenta HOM05D002428 ORTHO05D008664 3.3e-74 283.1 384 55.2
Gorai.011G160100 Gossypium raimondii HOM05D002428 ORTHO05D008664 1.6e-73 280.8 362 56.9
TWI73G0822 Tripterygium wilfordii HOM05D002428 ORTHO05D008664 4.8e-73 279.3 340 59.4
CANSAT78G1408 Cannabis sativa HOM05D002428 ORTHO05D008664 8.1e-73 278.5 378 54.0
MD04G1005000 Malus domestica HOM05D002428 ORTHO05D008664 2.4e-72 276.9 357 55.2
Gohir.A10G122700 Gossypium hirsutum HOM05D002428 ORTHO05D008664 6.9e-72 275.4 394 51.8
Nn1g07803 Nelumbo nucifera HOM05D002428 ORTHO05D008664 3.4e-71 273.1 404 52.5
RcHm_v2.0_Chr4g0385901 Rosa chinensis HOM05D002428 ORTHO05D008664 7.6e-71 271.9 382 54.2
CSS0043127 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 2.9e-70 270.0 381 53.0
Hma1.2p1_4144F.1_g338390 Hydrangea macrophylla HOM05D002428 ORTHO05D008664 3.8e-70 269.6 342 55.0
AL7G42860 Arabidopsis lyrata HOM05D002428 ORTHO05D008664 6.5e-70 268.9 347 55.3
Thhalv10025497m.g Eutrema salsugineum HOM05D002428 ORTHO05D008664 1.9e-69 267.3 375 54.4
CARHR219440 Cardamine hirsuta HOM05D002428 ORTHO05D008664 4.2e-69 266.2 383 54.0
Sp7g11440 Schrenkiella parvula HOM05D002428 ORTHO05D008664 4.2e-69 266.2 388 54.6
Solyc09g091830.4 Solanum lycopersicum HOM05D002428 ORTHO05D008664 9.3e-69 265.0 382 52.1
arahy.Tifrunner.gnm1.ann1.HBBQ58 Arachis hypogaea HOM05D002428 ORTHO05D008664 1.2e-68 264.6 404 52.2
BcaB03g16059 Brassica carinata HOM05D002428 ORTHO05D008664 3.5e-68 263.1 372 57.3
MBI07_g22621_MAGBIO Magnolia biondii HOM05D002428 ORTHO05D008664 3.5e-68 263.1 382 52.6
Sopen09g034720 Solanum pennellii HOM05D002428 ORTHO05D008664 3.5e-68 263.1 383 52.0
Carub.0007s2880 Capsella rubella HOM05D002428 ORTHO05D008664 6.0e-68 262.3 385 52.5
Glyma.10G192300 Glycine max HOM05D002428 ORTHO05D008664 7.9e-68 261.9 396 56.3
Glyma.20G198100 Glycine max HOM05D002428 ORTHO05D008664 1.0e-67 261.5 351 57.0
MSTRG.9823 Avicennia marina HOM05D002428 ORTHO05D008664 2.3e-67 260.4 380 50.5
PGR142G3513 Punica granatum HOM05D002428 ORTHO05D008664 8.7e-67 258.5 354 50.6
arahy.Tifrunner.gnm1.ann1.N1R11Y Arachis hypogaea HOM05D002428 ORTHO05D008664 1.1e-66 258.1 410 50.5
Potri.001G049900 Populus trichocarpa HOM05D002428 ORTHO05D008664 2.5e-66 256.9 389 52.7
Nitab4.5_0004974g0040 Nicotiana tabacum HOM05D002428 ORTHO05D008664 2.8e-65 253.4 398 52.3
BolC4t25803H Brassica oleracea HOM05D002428 ORTHO05D008664 4.8e-65 252.7 384 52.3
C04p42250 Brassica napus HOM05D002428 ORTHO05D008664 1.1e-64 251.5 386 52.3
Ca_09779_v3 Cicer arietinum L. HOM05D002428 ORTHO05D008664 1.4e-64 251.1 296 50.7
Rhsim09G0054700 Rhododendron simsii HOM05D002428 ORTHO05D008664 1.8e-64 250.8 396 51.3
BcaC02g09399 Brassica carinata HOM05D002428 ORTHO05D008664 2.4e-64 250.4 379 53.0
SalBow8G5518 Salvia bowleyana HOM05D002428 ORTHO05D008664 2.4e-64 250.4 383 49.9
Rhsim09G0054100 Rhododendron simsii HOM05D002428 ORTHO05D008664 6.9e-64 248.8 396 51.0
Sabra01G0034800 Salix brachista HOM05D002428 ORTHO05D008664 6.9e-64 248.8 389 50.9
FAN12G4076 Fragaria x ananassa HOM05D002428 ORTHO05D008664 9.0e-64 248.4 291 52.2
FvH4_4g00470 Fragaria vesca HOM05D002428 ORTHO05D008664 2.0e-63 247.3 363 52.6
PGSC0003DMG400029637 Solanum tuberosum HOM05D002428 ORTHO05D008664 3.4e-63 246.5 371 51.8
CSS0042862 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 1.0e-62 245.0 390 51.3
QL06p024024 Quercus lobata HOM05D002428 ORTHO05D008664 2.9e-62 243.4 381 51.2
GSVIVG01029077001 Vitis vinifera HOM05D002428 ORTHO05D008664 2.9e-62 243.4 212 62.3
Cfa014927 Carpinus fangiana HOM05D002428 ORTHO05D008664 8.5e-62 241.9 377 50.4
CAN.G500.15 Capsicum annuum HOM05D002428 ORTHO05D008664 1.4e-61 241.1 383 50.1
Psat6g141320 Pisum sativum HOM05D002428 ORTHO05D008664 1.4e-61 241.1 378 51.6
A04p08510 Brassica napus HOM05D002428 ORTHO05D008664 7.2e-61 238.8 383 50.4
BraA04t16542Z Brassica rapa HOM05D002428 ORTHO05D008664 7.2e-61 238.8 383 50.4
FAN22G0466 Fragaria x ananassa HOM05D002428 ORTHO05D005085 7.2e-61 238.8 291 51.2
Migut.G00668 Erythranthe guttata HOM05D002428 ORTHO05D008664 3.6e-60 236.5 389 48.3
unitig_747.g21693 Utricularia gibba HOM05D002428 ORTHO05D008664 1.0e-59 235.0 374 48.4
Cc03_g07620 Coffea canephora HOM05D002428 ORTHO05D008664 3.9e-59 233.0 368 49.7
Medtr1g072690 Medicago truncatula HOM05D002428 ORTHO05D008664 6.7e-59 232.3 399 50.9
SGA_v2.0_scaffold72G24054 Striga asiatica HOM05D002428 ORTHO05D008664 1.9e-58 230.7 383 49.6
Eucgr.H00072 Eucalyptus grandis HOM05D002428 ORTHO05D008664 5.7e-58 229.2 333 49.5
Lj5g0020317 Lotus japonicus HOM05D002428 ORTHO05D008664 9.7e-58 228.4 379 48.8
Lsat_1_v5_gn_6_59880 Lactuca sativa HOM05D002428 ORTHO05D008664 1.6e-57 227.6 398 47.7
Peaxi162Scf00047g00729 Petunia axillaris HOM05D002428 ORTHO05D008664 2.2e-57 227.3 289 49.8
Lalb_Chr02g0150781 Lupinus albus HOM05D002428 ORTHO05D008664 2.8e-57 226.9 272 49.3
TPR.G1546 Trifolium pratense HOM05D002428 ORTHO05D008664 3.7e-57 226.5 267 49.1
Os04g0514400 Oryza sativa ssp. japonica HOM05D002428 ORTHO05D008664 1.1e-56 224.9 219 63.9
HPP92_025384 Vanilla planifolia HOM05D002428 ORTHO05D008664 1.8e-56 224.2 217 56.7
Aqoxy2G03893 Aquilegia oxysepala HOM05D002428 ORTHO05D008664 5.9e-55 219.2 297 50.5
CSS0022946 Camellia sinensis var. sinensis HOM05D002428 ORTHO05D008664 1.0e-54 218.4 368 48.4
ATR0736G155 Amborella trichopoda HOM05D002428 ORTHO05D008664 6.5e-54 215.7 400 45.8
Zm00001eb426530 Zea mays HOM05D002428 ORTHO05D008664 2.5e-53 213.8 231 53.2
Ah.01g006100 Amaranthus hybridus HOM05D002428 ORTHO05D008664 7.2e-53 212.2 270 47.0
Nitab4.5_0003750g0020 Nicotiana tabacum HOM05D002428 ORTHO05D008664 7.2e-53 212.2 373 47.2
Actinidia35874 Actinidia chinensis HOM05D002428 ORTHO05D008664 2.1e-52 210.7 183 60.1
DCAR_026600 Daucus carota HOM05D002428 ORTHO05D008664 2.1e-52 210.7 413 45.0
HanXRQChr07g0185701 Helianthus annuus HOM05D002428 ORTHO05D008664 4.6e-52 209.5 392 44.6
Ah.01g018930 Amaranthus hybridus HOM05D002428 ORTHO05D008664 7.9e-52 208.8 287 45.6
Lj6A561G51 Lonicera japonica HOM05D002428 ORTHO05D008664 7.9e-52 208.8 464 41.2
ECA233G2351 Erigeron canadensis HOM05D002428 ORTHO05D008664 1.0e-51 208.4 266 48.5
vmacro00485 Vaccinium macrocarpon HOM05D002428 ORTHO05D008664 1.0e-51 208.4 455 43.7
EL10Ac9g21669 Beta vulgaris HOM05D002428 ORTHO05D008664 3.3e-50 203.4 287 43.9
Sc13g0000090 Simmondsia chinensis HOM05D002428 ORTHO05D008664 9.7e-50 201.8 202 53.5
Actinidia25626 Actinidia chinensis HOM05D002428 ORTHO05D008664 1.1e-48 198.4 339 50.1
PSO063G5917 Papaver somniferum HOM05D002428 ORTHO05D008664 6.9e-48 195.7 322 42.9
Atru.chr4.1737 Acer truncatum HOM05D002428 ORTHO05D008664 1.2e-47 194.9 165 58.2
AUR62010416 Chenopodium quinoa HOM05D002428 ORTHO05D008664 4.5e-47 193.0 202 51.0
PSO017G5948 Papaver somniferum HOM05D002428 ORTHO05D008664 1.3e-46 191.4 303 44.2
Prupe.3G076100 Prunus persica HOM05D002428 ORTHO05D008664 1.1e-45 188.3 181 54.1
CDE08G1693 Ceratophyllum demersum HOM05D002428 ORTHO05D008664 2.7e-44 183.7 332 45.8
Phvul.010G104000 Phaseolus vulgaris HOM05D002428 ORTHO05D008664 3.6e-44 183.3 370 45.7
SEGI_22388 Sequoiadendron giganteum HOM05D002428 ORTHO05D008664 6.7e-43 179.1 207 48.3
AUR62016799 Chenopodium quinoa HOM05D002428 ORTHO05D008664 2.0e-42 177.6 185 52.4
Pp3c19_7640 Physcomitrium patens HOM05D002428 ORTHO05D008664 8.5e-38 162.2 210 43.3
CDE05G2575 Ceratophyllum demersum HOM05D002428 ORTHO05D008664 1.2e-36 158.3 273 39.9
AT4G13670 Arabidopsis thaliana HOM05D002428 ORTHO05D008664 7.5e-34 149.1 272 54.8
Mapoly0004s0042 Marchantia polymorpha HOM05D002428 ORTHO05D008664 2.8e-33 147.1 207 40.1
CBR_g30251 Chara braunii HOM05D002428 ORTHO05D008664 8.2e-33 145.6 217 40.6
SMO358G0076 Selaginella moellendorffii HOM05D002428 ORTHO05D008664 7.0e-32 142.5 231 39.8
AagrBONN_evm.TU.Sc2ySwM_344.4007 Anthoceros agrestis HOM05D002428 ORTHO05D008664 7.7e-31 139.0 199 42.2
Oeu022362.1 Olea europaea HOM05D002428 ORTHO05D008664 3.7e-17 93.6 158 43.7
Prupe.1G083800 Prunus persica HOM05D002020 ORTHO05D002046 3.3e-13 80.5 81 58.0
Hma1.2p1_1076F.1_g254570 Hydrangea macrophylla HOM05D002428 ORTHO05D008664 6.1e-12 76.3 74 55.4
AL7G42850 Arabidopsis lyrata HOM05D002428 ORTHO05D008664 1.0e-11 75.5 251 32.3
SGA_v2.0_scaffold935G53736 Striga asiatica HOM05D002428 ORTHO05D008664 3.0e-11 73.9 198 47.5


User provided reference genes

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