Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_3G009320 Cucumis sativus L. HOM05D002977 ORTHO05D003225 5.8e-184 647.5 347 100.0
MELO3C006152.2 Cucumis melo HOM05D002977 ORTHO05D003225 3.1e-145 518.8 327 87.5
ClCG05G001920 Citrullus lanatus HOM05D002977 ORTHO05D003225 8.0e-117 424.5 359 68.8
Sed0021237 Sechium edule HOM05D002977 ORTHO05D003225 4.3e-78 295.8 346 57.2
Gorai.004G156200 Gossypium raimondii HOM05D002977 ORTHO05D003225 2.0e-27 127.5 381 31.2
Gohir.A08G129200 Gossypium hirsutum HOM05D002977 ORTHO05D003225 7.7e-27 125.6 378 30.7
Haze_15232 Corylus avellana HOM05D002977 ORTHO05D003225 2.2e-26 124.0 416 29.8
Gohir.D08G150500 Gossypium hirsutum HOM05D002977 ORTHO05D003225 3.8e-26 123.2 378 31.0
Prupe.2G153900 Prunus persica HOM05D002977 ORTHO05D003225 6.5e-26 122.5 387 35.4
RcHm_v2.0_Chr1g0352121 Rosa chinensis HOM05D002977 ORTHO05D003225 1.1e-25 121.7 449 33.2
Sabra02G0121100 Salix brachista HOM05D002977 ORTHO05D003225 2.5e-25 120.6 434 30.9
Cfa004177 Carpinus fangiana HOM05D002977 ORTHO05D003225 5.5e-25 119.4 427 32.8
FAN10G0205 Fragaria x ananassa HOM05D002977 ORTHO05D003225 1.6e-24 117.9 434 32.5
Thecc.01G369200 Theobroma cacao HOM05D002977 ORTHO05D003225 2.1e-24 117.5 392 32.1
Cpa.g.c33531 Carica papaya HOM05D002977 ORTHO05D003225 5.1e-23 112.8 383 35.2
FvH4_7g12980 Fragaria vesca HOM05D002977 ORTHO05D003225 5.1e-23 112.8 436 33.5
FAN10G1938 Fragaria x ananassa HOM05D002977 ORTHO05D003225 1.1e-22 111.7 435 32.0
FAN06G4128 Fragaria x ananassa HOM05D002977 ORTHO05D003225 1.5e-22 111.3 444 33.6
Potri.002G152700 Populus trichocarpa HOM05D002977 ORTHO05D003225 1.5e-22 111.3 424 30.0
Manes.05G040400 Manihot esculenta HOM05D002977 ORTHO05D003225 1.3e-21 108.2 386 32.1
FAN06G3334 Fragaria x ananassa HOM05D002977 ORTHO05D003225 1.7e-21 107.8 436 32.1
DCAR_008585 Daucus carota HOM05D002977 ORTHO05D003225 2.8e-21 107.1 354 31.1
MD01G1047600 Malus domestica HOM05D002977 ORTHO05D003225 3.7e-21 106.7 374 33.4
Manes.01G262800 Manihot esculenta HOM05D002977 ORTHO05D003225 1.1e-20 105.1 370 36.8
MD07G1125600 Malus domestica HOM05D002977 ORTHO05D003225 2.4e-20 104.0 453 32.0
Duzib138G0317 Durio zibethinus HOM05D002977 ORTHO05D003225 1.2e-19 101.7 427 27.4
COL.COLO4_06963 Corchorus olitorius HOM05D002977 ORTHO05D003225 1.5e-19 101.3 461 30.6
PGSC0003DMG400017053 Solanum tuberosum HOM05D002977 ORTHO05D003225 2.0e-19 100.9 346 28.9
Ciclev10020246m.g Citrus clementina HOM05D002977 ORTHO05D003225 3.4e-19 100.1 413 27.1
DCAR_006904 Daucus carota HOM05D002977 ORTHO05D003225 4.5e-19 99.8 352 32.7
QL08p050716 Quercus lobata HOM05D002977 ORTHO05D003225 5.9e-19 99.4 433 27.7
Sopen01g037600 Solanum pennellii HOM05D002977 ORTHO05D003225 1.7e-18 97.8 349 31.5
Solyc01g091830.3 Solanum lycopersicum HOM05D002977 ORTHO05D003225 2.2e-18 97.4 353 28.6
Eucgr.E00281 Eucalyptus grandis HOM05D002977 ORTHO05D003225 3.8e-18 96.7 418 32.3
Nitab4.5_0000134g0230 Nicotiana tabacum HOM05D002977 ORTHO05D003225 3.8e-18 96.7 370 27.0
Peaxi162Scf00233g00015 Petunia axillaris HOM05D002977 ORTHO05D003225 8.5e-18 95.5 372 28.8
CANSAT56G0238 Cannabis sativa HOM05D002977 ORTHO05D003225 1.4e-17 94.7 364 27.5
FAN01G0110 Fragaria x ananassa HOM05D002977 ORTHO05D003225 1.9e-17 94.4 426 31.2
Dinv43754 Davidia involucrata HOM05D002977 ORTHO05D003225 2.5e-17 94.0 403 29.5
Sabra14G0054900 Salix brachista HOM05D002977 ORTHO05D003225 2.5e-17 94.0 445 27.9
Potri.014G077400 Populus trichocarpa HOM05D002977 ORTHO05D003225 2.7e-16 90.5 425 27.8
THA.LOC104801463 Tarenaya hassleriana HOM05D002977 ORTHO05D003225 6.7e-15 85.9 212 38.7
TWI14G0163 Tripterygium wilfordii HOM05D002977 ORTHO05D003225 6.7e-15 85.9 332 35.2
GSVIVG01027598001 Vitis vinifera HOM05D002977 ORTHO05D003225 8.8e-15 85.5 322 29.5
Glyma.07G079500 Glycine max HOM05D002977 ORTHO05D003225 2.6e-14 84.0 426 26.3
Nitab4.5_0003356g0060 Nicotiana tabacum HOM05D002977 ORTHO05D003225 2.6e-14 84.0 347 28.8
CAN.G170.54 Capsicum annuum HOM05D002977 ORTHO05D003225 5.7e-14 82.8 376 30.9
Actinidia33447 Actinidia chinensis HOM05D002977 ORTHO05D003225 7.4e-14 82.4 342 28.7
Peaxi162Scf00021g00041 Petunia axillaris HOM05D002977 ORTHO05D003225 1.7e-13 81.3 383 28.2
Nitab4.5_0010430g0070 Nicotiana tabacum HOM05D002977 ORTHO05D003225 2.8e-13 80.5 136 48.5
Atru.chr5.400 Acer truncatum HOM05D002977 ORTHO05D003225 3.7e-13 80.1 203 42.4
CSS0040991 Camellia sinensis var. sinensis HOM05D002977 ORTHO05D003225 2.4e-12 77.4 368 26.9
Hma1.2p1_0132F.1_g060810 Hydrangea macrophylla HOM05D002977 ORTHO05D003225 4.1e-12 76.6 367 27.8
Hund16963 Selenicereus undatus HOM05D002977 ORTHO05D003225 5.3e-12 76.3 360 26.7
Migut.B01683 Erythranthe guttata HOM05D002977 ORTHO05D003225 7.0e-12 75.9 319 32.9
Lalb_Chr10g0097561 Lupinus albus HOM05D002977 ORTHO05D003225 7.0e-12 75.9 408 28.9
Cc02_g37200 Coffea canephora HOM05D002977 ORTHO05D003225 1.2e-11 75.1 379 25.9
Lsat_1_v5_gn_7_8261 Lactuca sativa HOM05D002977 ORTHO05D003225 1.2e-11 75.1 407 26.5
Nitab4.5_0004550g0040 Nicotiana tabacum HOM05D002977 ORTHO05D003225 2.0e-11 74.3 379 30.6
CARHR248960 Cardamine hirsuta HOM05D002977 ORTHO05D003225 2.6e-11 73.9 194 42.3
Oeu024421.1 Olea europaea HOM05D002977 ORTHO05D003225 2.6e-11 73.9 325 31.7
Oeu024422.1 Olea europaea HOM05D002977 ORTHO05D003225 2.6e-11 73.9 355 29.6
Oeu059227.1 Olea europaea HOM05D002977 ORTHO05D003225 2.6e-11 73.9 312 29.8
Oeu059228.1 Olea europaea HOM05D002977 ORTHO05D003225 3.5e-11 73.6 312 29.8
Aa31LG5G240 Aethionema arabicum HOM05D002977 ORTHO05D003225 7.7e-11 72.4 254 32.3
BcaC01g06858 Brassica carinata HOM05D002977 ORTHO05D003225 7.7e-11 72.4 193 31.6
C03p39020 Brassica napus HOM05D002977 ORTHO05D003225 7.7e-11 72.4 193 31.6
BolC3t16174H Brassica oleracea HOM05D002977 ORTHO05D003225 7.7e-11 72.4 193 31.6
AUR62033369 Chenopodium quinoa HOM05D049868 ORTHO05D003225 7.7e-11 72.4 344 27.0
HanXRQChr06g0168991 Helianthus annuus HOM05D002977 ORTHO05D003225 7.7e-11 72.4 404 25.7
A03p32000 Brassica napus HOM05D002977 ORTHO05D003225 1.3e-10 71.6 188 31.4
AL6G52680 Arabidopsis lyrata HOM05D002977 ORTHO05D003225 2.2e-10 70.9 194 38.7
BraA03t12372Z Brassica rapa HOM05D002977 ORTHO05D003225 2.2e-10 70.9 241 31.1
Medtr8g032770 Medicago truncatula HOM05D002977 ORTHO05D003225 2.2e-10 70.9 435 23.9
vmacro20976 Vaccinium macrocarpon HOM05D002977 ORTHO05D003225 2.9e-10 70.5 293 27.6
Phvul.010G089700 Phaseolus vulgaris HOM05D002977 ORTHO05D003225 5.0e-10 69.7 243 31.3
BcaB01g02155 Brassica carinata HOM05D002977 ORTHO05D003225 1.1e-09 68.6 245 32.2
VMungo0331G1467 Vigna mungo HOM05D002977 ORTHO05D003225 3.2e-09 67.0 422 25.4
Thhalv10029270m.g Eutrema salsugineum HOM05D002977 ORTHO05D003225 4.2e-09 66.6 245 35.5
TWI59G0633 Tripterygium wilfordii HOM05D002977 ORTHO05D003225 1.2e-08 65.1 222 36.9
TAR629G3293 Trochodendron aralioides HOM05D002977 ORTHO05D003225 1.6e-08 64.7 413 29.5
PGR042G2435 Punica granatum HOM05D002977 ORTHO05D003225 3.6e-08 63.5 429 26.6
MSTRG.20788 Avicennia marina HOM05D002977 ORTHO05D003225 6.1e-08 62.8 384 29.2
Glyma.03G017800 Glycine max HOM05D002977 ORTHO05D003225 8.0e-08 62.4 428 25.9
Sp6g00770 Schrenkiella parvula HOM05D002977 ORTHO05D003225 8.0e-08 62.4 194 34.0
Duzib133G0091 Durio zibethinus HOM05D002977 ORTHO05D003225 3.0e-07 60.5 128 35.2
Aqoxy7G00463 Aquilegia oxysepala HOM05D002977 ORTHO05D003225 4.0e-07 60.1 417 26.9
Nn6g34271 Nelumbo nucifera HOM05D002977 ORTHO05D003225 4.0e-07 60.1 439 28.0
CiPaw.02G024700 Carya illinoinensis HOM05D002977 ORTHO05D003225 6.7e-07 59.3 130 33.1
Ca_23758_v3 Cicer arietinum L. HOM05D002977 ORTHO05D003225 2.0e-06 57.8 431 28.1
MBI04_g42596_MAGBIO Magnolia biondii HOM05D002977 ORTHO05D003225 3.3e-06 57.0 400 23.8
Ciclev10023310m.g Citrus clementina HOM05D002977 ORTHO05D003225 4.4e-06 56.6 134 32.8


User provided reference genes

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