Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_3G006780 Cucumis sativus L. HOM05D006925 ORTHO05D008830 1.1e-154 550.1 310 100.0
ClCG10G007640 Citrullus lanatus HOM05D006925 ORTHO05D008830 4.1e-141 505.0 319 81.8
Dinv30983 Davidia involucrata HOM05D006925 ORTHO05D008830 1.5e-119 433.3 243 85.2
QL02p103778 Quercus lobata HOM05D006925 ORTHO05D008830 3.8e-118 428.7 245 82.9
GSVIVG01023121001 Vitis vinifera HOM05D006925 ORTHO05D008830 5.5e-117 424.9 243 83.5
Cfa004416 Carpinus fangiana HOM05D006925 ORTHO05D008830 1.6e-116 423.3 245 82.9
CiPaw.05G000400 Carya illinoinensis HOM05D006925 ORTHO05D008830 1.8e-115 419.9 243 83.5
THA.LOC104824095 Tarenaya hassleriana HOM05D006925 ORTHO05D008830 3.0e-115 419.1 243 80.2
CSS0004280 Camellia sinensis var. sinensis HOM05D006925 ORTHO05D008830 8.7e-115 417.5 246 81.7
CSS0028149 Camellia sinensis var. sinensis HOM05D006925 ORTHO05D008830 8.7e-115 417.5 246 81.7
COL.COLO4_31098 Corchorus olitorius HOM05D006925 ORTHO05D008830 1.1e-114 417.2 246 82.9
Gorai.011G089700 Gossypium raimondii HOM05D006925 ORTHO05D008830 1.1e-114 417.2 243 83.1
Gohir.D10G082800 Gossypium hirsutum HOM05D006925 ORTHO05D008830 7.4e-114 414.5 243 82.7
Duzib160G0166 Durio zibethinus HOM05D006925 ORTHO05D008830 9.6e-114 414.1 246 81.7
MSTRG.16455 Avicennia marina HOM05D006925 ORTHO05D008830 1.3e-113 413.7 242 80.2
Potri.003G046600 Populus trichocarpa HOM05D006925 ORTHO05D008830 1.6e-113 413.3 245 80.4
Hma1.2p1_0157F.1_g069250 Hydrangea macrophylla HOM05D006925 ORTHO05D008830 2.1e-113 412.9 243 81.1
Nitab4.5_0002274g0030 Nicotiana tabacum HOM05D006925 ORTHO05D008830 6.2e-113 411.4 245 80.4
Sabra03G0019700 Salix brachista HOM05D006925 ORTHO05D000812 6.2e-113 411.4 245 80.0
Ah.02g128580 Amaranthus hybridus HOM05D006925 ORTHO05D008830 1.1e-112 410.6 246 79.3
MBI06_g17054_MAGBIO Magnolia biondii HOM05D006925 ORTHO05D008830 3.1e-112 409.1 242 79.8
Haze_09956 Corylus avellana HOM05D006925 ORTHO05D008830 4.0e-112 408.7 261 77.4
HanXRQChr03g0071141 Helianthus annuus HOM05D006925 ORTHO05D008830 6.9e-112 407.9 242 80.6
Prupe.1G587400 Prunus persica HOM05D006925 ORTHO05D008830 6.9e-112 407.9 246 80.5
CANSAT01G0563 Cannabis sativa HOM05D006925 ORTHO05D008830 9.0e-112 407.5 240 80.4
FAN18G1352 Fragaria x ananassa HOM05D006925 ORTHO05D008830 1.2e-111 407.1 246 78.9
RcHm_v2.0_Chr7g0218321 Rosa chinensis HOM05D006925 ORTHO05D008830 1.2e-111 407.1 246 79.3
Cc02_g23820 Coffea canephora HOM05D006925 ORTHO05D008830 1.5e-111 406.8 246 80.9
PGR042G2053 Punica granatum HOM05D006925 ORTHO05D008830 2.0e-111 406.4 245 80.0
FAN08G3037 Fragaria x ananassa HOM05D006925 ORTHO05D008830 5.8e-111 404.8 244 78.7
ECA248G0237 Erigeron canadensis HOM05D002199 ORTHO05D007829 1.3e-110 403.7 244 79.5
DCAR_004828 Daucus carota HOM05D006925 ORTHO05D008830 1.7e-110 403.3 243 79.0
TWI14G0460 Tripterygium wilfordii HOM05D006925 ORTHO05D008830 2.2e-110 402.9 243 80.2
FvH4_5g27220 Fragaria vesca HOM05D006925 ORTHO05D008830 2.9e-110 402.5 246 78.0
CDE05G0936 Ceratophyllum demersum HOM05D006925 ORTHO05D008830 4.9e-110 401.7 243 78.2
Glyma.07G271000 Glycine max HOM05D006925 ORTHO05D008830 4.9e-110 401.7 248 77.8
MD15G1445500 Malus domestica HOM05D006925 ORTHO05D008830 6.5e-110 401.4 246 78.5
arahy.Tifrunner.gnm1.ann1.EDE5FN Arachis hypogaea HOM05D006925 ORTHO05D008830 1.4e-109 400.2 247 78.9
unitig_8.g4519 Utricularia gibba HOM05D006925 ORTHO05D008830 1.4e-109 400.2 239 79.1
VMungo1215G1006 Vigna mungo HOM05D006925 ORTHO05D008830 1.4e-109 400.2 247 77.3
Lj4g0023352 Lotus japonicus HOM05D006925 ORTHO05D008830 4.2e-109 398.7 250 80.0
ATR1089G139 Amborella trichopoda HOM05D006925 ORTHO05D008830 7.1e-109 397.9 246 76.4
arahy.Tifrunner.gnm1.ann1.MTF64G Arachis hypogaea HOM05D006925 ORTHO05D008830 9.3e-109 397.5 247 78.5
PGSC0003DMG400003436 Solanum tuberosum HOM05D006925 ORTHO05D008830 2.7e-108 396.0 245 76.3
Solyc10g044840.2 Solanum lycopersicum HOM05D006925 ORTHO05D008830 3.5e-108 395.6 243 77.4
Aqoxy5G01835 Aquilegia oxysepala HOM05D006925 ORTHO05D008830 4.6e-108 395.2 245 76.7
Sopen10g013620 Solanum pennellii HOM05D006925 ORTHO05D008830 7.9e-108 394.4 243 77.0
CAN.G402.4 Capsicum annuum HOM05D006925 ORTHO05D008830 2.3e-107 392.9 243 77.8
AL5G11640 Arabidopsis lyrata HOM05D006925 ORTHO05D008830 6.7e-107 391.3 246 76.0
Migut.B00701 Erythranthe guttata HOM05D006925 ORTHO05D008830 1.1e-106 390.6 244 77.0
Lalb_Chr07g0176851 Lupinus albus HOM05D006925 ORTHO05D008830 1.5e-106 390.2 248 74.6
BcaC06g31233 Brassica carinata HOM05D006925 ORTHO05D008830 2.5e-106 389.4 246 75.2
Peaxi162Scf00055g00018 Petunia axillaris HOM05D006925 ORTHO05D008830 4.3e-106 388.7 275 70.5
PSO210G4845 Papaver somniferum HOM05D006925 ORTHO05D008830 3.7e-105 385.6 248 74.2
Sp2g13680 Schrenkiella parvula HOM05D006925 ORTHO05D008830 4.8e-105 385.2 246 74.8
Nn5g27113 Nelumbo nucifera HOM05D006925 ORTHO05D008830 6.3e-105 384.8 227 80.6
Actinidia00135 Actinidia chinensis HOM05D006925 ORTHO05D008830 1.1e-104 384.0 240 75.8
BcaC06g34054 Brassica carinata HOM05D006925 ORTHO05D008830 3.1e-104 382.5 250 73.6
C07p33220 Brassica napus HOM05D006925 ORTHO05D008830 3.1e-104 382.5 250 73.6
BolC7t43833H Brassica oleracea HOM05D006925 ORTHO05D008830 3.1e-104 382.5 250 73.6
A06p43640 Brassica napus HOM05D006925 ORTHO05D008830 4.1e-104 382.1 250 73.6
BraA06t27246Z Brassica rapa HOM05D006925 ORTHO05D008830 4.1e-104 382.1 250 73.6
Lsat_1_v5_gn_7_69720 Lactuca sativa HOM05D006925 ORTHO05D008830 7.6e-103 377.9 274 69.7
FAN13G1230 Fragaria x ananassa HOM05D006925 ORTHO05D008830 1.1e-101 374.0 264 70.1
Sed0012673 Sechium edule HOM05D006925 ORTHO05D008830 3.6e-100 369.0 256 82.8
Gohir.A10G068400 Gossypium hirsutum HOM05D006925 ORTHO05D008830 4.6e-100 368.6 211 83.9
Medtr4g134410 Medicago truncatula HOM05D006925 ORTHO05D008830 8.7e-99 364.4 253 72.3
Aa31LG2G7670 Aethionema arabicum HOM05D006925 ORTHO05D008830 1.9e-98 363.2 229 75.5
Eucgr.G00053 Eucalyptus grandis HOM05D006925 ORTHO05D008830 3.3e-98 362.5 212 82.1
Carub.0005s0146 Capsella rubella HOM05D006925 ORTHO05D008830 4.1e-96 355.5 219 77.2
Nitab4.5_0000288g0050 Nicotiana tabacum HOM05D006925 ORTHO05D008830 5.9e-95 351.7 245 71.0
MELO3C016443.2 Cucumis melo HOM05D006925 ORTHO05D008830 7.7e-95 351.3 290 73.8
Thecc.06G062200 Theobroma cacao HOM05D006925 ORTHO05D008830 2.2e-94 349.7 196 83.7
HPP92_001204 Vanilla planifolia HOM05D006925 ORTHO05D008830 9.4e-93 344.4 241 70.1
Sc03g0005610 Simmondsia chinensis HOM05D006925 ORTHO05D008830 5.1e-91 338.6 196 79.6
Ca_13518_v3 Cicer arietinum L. HOM05D006925 ORTHO05D008830 6.7e-91 338.2 212 78.8
Phvul.003G090400 Phaseolus vulgaris HOM05D006925 ORTHO05D008830 5.7e-90 335.1 196 79.6
Manes.06G015100 Manihot esculenta HOM05D006925 ORTHO05D008830 9.7e-90 334.3 182 85.7
SGA_v2.0_scaffold254G45226 Striga asiatica HOM05D006925 ORTHO05D008830 3.7e-89 332.4 303 57.4
Thhalv10004663m.g Eutrema salsugineum HOM05D006925 ORTHO05D008830 1.2e-87 327.4 202 73.8
Psat4g001760 Pisum sativum HOM05D006925 ORTHO05D008830 1.4e-85 320.5 248 64.1
AUR62032491 Chenopodium quinoa HOM05D006925 ORTHO05D008830 1.0e-83 314.3 188 77.7
Lj5A307T31 Lonicera japonica HOM05D006925 ORTHO05D008830 5.7e-82 308.5 253 62.5
Mapoly0001s0380 Marchantia polymorpha HOM05D006925 ORTHO05D008830 2.2e-81 306.6 244 60.2
EL10Ac6g13952 Beta vulgaris HOM05D006925 ORTHO05D008830 1.4e-80 303.9 250 60.0
Pp3c15_4340 Physcomitrium patens HOM05D006925 ORTHO05D008830 2.9e-78 296.2 240 58.3
AUR62040119 Chenopodium quinoa HOM05D006925 ORTHO05D008830 7.2e-77 291.6 214 67.3
Pp3c9_8480 Physcomitrium patens HOM05D006925 ORTHO05D008830 1.6e-76 290.4 240 58.3
Hund15314 Selenicereus undatus HOM05D006925 ORTHO05D008830 3.6e-76 289.3 182 77.5
TAR628G1169 Trochodendron aralioides HOM05D006925 ORTHO05D008830 5.3e-72 275.4 154 83.1
TPR.G5931 Trifolium pratense HOM05D006925 ORTHO05D008830 2.5e-69 266.5 221 60.6
SMO358G0233 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 9.4e-69 264.6 243 53.5
vmacro01630 Vaccinium macrocarpon HOM05D006925 ORTHO05D008830 8.8e-67 258.1 185 68.6
AagrBONN_evm.TU.Sc2ySwM_369.585 Anthoceros agrestis HOM05D006925 ORTHO05D008830 7.0e-64 248.4 211 57.3
CARHR144990 Cardamine hirsuta HOM05D006925 ORTHO05D008830 2.7e-63 246.5 169 68.0
Zm00001eb064090 Zea mays HOM05D006925 ORTHO05D008830 2.9e-62 243.0 181 63.5
SEGI_06138 Sequoiadendron giganteum HOM05D006925 ORTHO05D008830 1.1e-61 241.1 245 54.3
AT2G02410 Arabidopsis thaliana HOM05D006925 ORTHO05D008830 9.5e-61 238.0 183 63.4
Sabra03G0019900 Salix brachista HOM05D006925 ORTHO05D008830 1.1e-48 198.0 117 78.6
Ciclev10003645m.g Citrus clementina HOM05D006925 ORTHO05D008830 1.3e-46 191.0 120 75.0
Rhsim11G0114700 Rhododendron simsii HOM05D006925 ORTHO05D008830 1.5e-45 187.6 213 49.3
Glyma.17G002900 Glycine max HOM05D006925 ORTHO05D008830 1.2e-34 151.4 93 80.6
AL5G11650 Arabidopsis lyrata HOM05D006925 ORTHO05D008830 2.4e-32 143.7 92 77.2
Os03g0843200 Oryza sativa ssp. japonica HOM05D006925 ORTHO05D008830 5.2e-27 125.9 104 61.5
SMO201G0205 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 6.4e-25 119.0 98 51.0
CBR_g49407 Chara braunii HOM05D000019 ORTHO05D000002 1.9e-21 107.5 117 50.4
SEGI_30664 Sequoiadendron giganteum HOM05D006925 ORTHO05D008830 4.3e-21 106.3 114 53.5
Oeu016658.1 Olea europaea HOM05D006925 ORTHO05D008830 7.3e-21 105.5 58 82.8
TAR628G1563 Trochodendron aralioides HOM05D006925 ORTHO05D008830 2.1e-20 104.0 56 85.7
SMO199G0001 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 4.9e-17 92.8 98 45.9
Oeu016657.1 Olea europaea HOM05D006925 ORTHO05D008830 6.4e-17 92.4 60 76.7
PRCOL_00002508 Prasinoderma coloniale HOM05D006925 ORTHO05D008830 4.8e-12 76.3 215 29.8
CBR_g46374 Chara braunii HOM05D000019 ORTHO05D000353 1.8e-11 74.3 47 70.2
Glyma.20G064100 Glycine max HOM05D006925 ORTHO05D008830 1.8e-11 74.3 41 80.5
EL10Ac6g13953 Beta vulgaris HOM05D006925 ORTHO05D008830 2.0e-10 70.9 52 69.2
MCO01G431 Micromonas commoda HOM05D006925 ORTHO05D008830 9.3e-08 62.0 230 27.0
vmacro01629 Vaccinium macrocarpon HOM05D006925 ORTHO05D008830 3.5e-07 60.1 55 56.4


User provided reference genes

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