Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_3G005060 Cucumis sativus L. HOM05D003074 ORTHO05D002434 9.6e-59 229.9 115 100.0
MELO3C025368.2 Cucumis melo HOM05D003074 ORTHO05D002434 8.1e-34 147.1 125 69.6
ClCG10G005340 Citrullus lanatus HOM05D003074 ORTHO05D002434 4.3e-27 124.8 94 71.3
MELO3C025367.2 Cucumis melo HOM05D003074 ORTHO05D002434 6.1e-13 77.8 116 44.8
Sed0005061 Sechium edule HOM05D003074 ORTHO05D002434 2.2e-10 69.3 117 41.9
Haze_09674 Corylus avellana HOM05D003074 ORTHO05D002434 2.4e-09 65.9 98 44.9
Cfa020350 Carpinus fangiana HOM05D003074 ORTHO05D002434 1.2e-08 63.5 96 43.8
CiPaw.12G129500 Carya illinoinensis HOM05D003074 ORTHO05D002434 2.6e-08 62.4 101 41.6
CSS0019776 Camellia sinensis var. sinensis HOM05D003074 ORTHO05D002434 1.7e-07 59.7 118 33.1
MD11G1218800 Malus domestica HOM05D003074 ORTHO05D002434 2.2e-07 59.3 80 52.5
TAR626G1667 Trochodendron aralioides HOM05D003074 ORTHO05D002434 2.2e-07 59.3 131 35.1
QL08p010341 Quercus lobata HOM05D003074 ORTHO05D002434 3.8e-07 58.5 76 47.4
Medtr3g051530 Medicago truncatula HOM05D003074 ORTHO05D002434 6.5e-07 57.8 117 36.8
Ca_01715_v3 Cicer arietinum L. HOM05D003074 ORTHO05D002434 8.5e-07 57.4 115 33.9
Ca_30684_v3 Cicer arietinum L. HOM05D003074 ORTHO05D002434 8.5e-07 57.4 115 33.9
Thecc.07G037400 Theobroma cacao HOM05D003074 ORTHO05D002434 8.5e-07 57.4 76 47.4
Duzib268G1655 Durio zibethinus HOM05D003074 ORTHO05D002434 1.1e-06 57.0 74 47.3
CiPaw.11G189000 Carya illinoinensis HOM05D003074 ORTHO05D002434 1.4e-06 56.6 100 38.0
Dinv40751 Davidia involucrata HOM05D003074 ORTHO05D002434 1.4e-06 56.6 77 46.8
RhsimUnG0250800 Rhododendron simsii HOM05D003074 ORTHO05D002434 1.4e-06 56.6 108 40.7
Duzib213G0915 Durio zibethinus HOM05D003074 ORTHO05D002434 2.5e-06 55.8 73 47.9
Medtr3g051570 Medicago truncatula HOM05D003074 ORTHO05D002434 4.2e-06 55.1 73 46.6
Sed0007461 Sechium edule HOM05D003074 ORTHO05D002434 4.2e-06 55.1 121 34.7
Atru.chr2.3399 Acer truncatum HOM05D003074 ORTHO05D002434 5.5e-06 54.7 77 48.1
Ciclev10009680m.g Citrus clementina HOM05D003074 ORTHO05D002434 5.5e-06 54.7 75 44.0
Medtr3g051510 Medicago truncatula HOM05D003074 ORTHO05D002434 5.5e-06 54.7 117 36.8
Actinidia35342 Actinidia chinensis HOM05D003074 ORTHO05D002434 7.2e-06 54.3 71 53.5
PGSC0003DMG400032292 Solanum tuberosum HOM05D003074 ORTHO05D002434 7.2e-06 54.3 118 34.7
Eucgr.F03465 Eucalyptus grandis HOM05D003074 ORTHO05D002434 9.4e-06 53.9 98 38.8
Medtr3g051610 Medicago truncatula HOM05D003074 ORTHO05D002434 9.4e-06 53.9 73 46.6
Rhsim13G0146000 Rhododendron simsii HOM05D002761 ORTHO05D003351 9.4e-06 53.9 94 39.4
RhsimUnG0109700 Rhododendron simsii HOM05D003074 ORTHO05D002434 9.4e-06 53.9 94 39.4
Sed0026688 Sechium edule HOM05D003074 ORTHO05D002434 9.4e-06 53.9 121 38.0


User provided reference genes

Program Settings