Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_3G003400 Cucumis sativus L. HOM05D006581 ORTHO05D007870 0.0e+00 1590.9 827 100.0
MELO3C014006.2 Cucumis melo HOM05D006581 ORTHO05D007870 0.0e+00 1505.0 827 94.6
ClCG00G000120 Citrullus lanatus HOM05D006581 ORTHO05D007870 0.0e+00 1432.5 848 88.6
ClCG10G003370 Citrullus lanatus HOM05D006581 ORTHO05D007870 0.0e+00 1429.8 848 88.4
Sed0002136 Sechium edule HOM05D006581 ORTHO05D007870 0.0e+00 1333.9 833 83.4
ClCG00G004880 Citrullus lanatus HOM05D006581 ORTHO05D007870 0.0e+00 1332.8 783 88.9
Cfa012052 Carpinus fangiana HOM05D006581 ORTHO05D007870 7.1e-289 997.3 820 63.0
Haze_09013 Corylus avellana HOM05D006581 ORTHO05D007870 5.6e-286 987.6 836 61.7
QL12p015968 Quercus lobata HOM05D006581 ORTHO05D007870 3.7e-277 958.4 833 60.1
CiPaw.08G049100 Carya illinoinensis HOM05D006581 ORTHO05D007870 3.4e-275 951.8 834 59.6
RcHm_v2.0_Chr4g0398711 Rosa chinensis HOM05D006581 ORTHO05D007870 2.1e-272 942.6 815 60.4
Prupe.1G071100 Prunus persica HOM05D006581 ORTHO05D007870 1.8e-271 939.5 835 59.8
FvH4_4g06790 Fragaria vesca HOM05D006581 ORTHO05D007870 3.0e-271 938.7 816 59.9
FAN12G3574 Fragaria x ananassa HOM05D006581 ORTHO05D007870 3.0e-271 938.7 816 59.9
GSVIVG01019912001 Vitis vinifera HOM05D006581 ORTHO05D007870 7.6e-267 924.1 836 58.0
Actinidia27421 Actinidia chinensis HOM05D006581 ORTHO05D007870 2.5e-265 919.1 802 60.7
CANSAT78G1168 Cannabis sativa HOM05D006581 ORTHO05D007870 7.2e-265 917.5 809 59.6
Potri.008G016000 Populus trichocarpa HOM05D006581 ORTHO05D007870 2.1e-264 916.0 802 59.5
MD15G1394600 Malus domestica HOM05D006581 ORTHO05D007870 6.1e-264 914.4 808 59.3
Hma1.2p1_0017F.1_g011220 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 1.8e-263 912.9 833 59.2
Ciclev10014277m.g Citrus clementina HOM05D006581 ORTHO05D007870 2.3e-263 912.5 807 58.0
Duzib128G1875 Durio zibethinus HOM05D006581 ORTHO05D007870 2.2e-261 906.0 844 57.3
Atru.chr12.1085 Acer truncatum HOM05D006581 ORTHO05D007870 5.3e-260 901.4 803 59.0
TAR629G0084 Trochodendron aralioides HOM05D006581 ORTHO05D007870 5.3e-260 901.4 836 57.5
Rhsim07G0097400 Rhododendron simsii HOM05D006581 ORTHO05D007870 9.0e-260 900.6 834 57.8
Sabra08G0009700 Salix brachista HOM05D006581 ORTHO05D007870 2.0e-259 899.4 800 58.2
Cpa.g.sc33.130 Carica papaya HOM05D006581 ORTHO05D007870 1.3e-258 896.7 795 57.9
Lj8A253T47 Lonicera japonica HOM05D006581 ORTHO05D007870 3.8e-258 895.2 800 58.1
Gorai.N007200 Gossypium raimondii HOM05D006581 ORTHO05D007870 6.5e-258 894.4 815 58.4
Gohir.D06G178000 Gossypium hirsutum HOM05D006581 ORTHO05D007870 1.4e-257 893.3 815 58.3
Thecc.10G119000 Theobroma cacao HOM05D006581 ORTHO05D007870 7.2e-257 891.0 839 57.3
Gohir.A06G170200 Gossypium hirsutum HOM05D006581 ORTHO05D007870 5.1e-255 884.8 815 57.9
Nitab4.5_0010186g0020 Nicotiana tabacum HOM05D006581 ORTHO05D007870 1.4e-249 866.7 812 56.3
Solyc08g079810.4 Solanum lycopersicum HOM05D006581 ORTHO05D007870 5.5e-249 864.8 812 56.8
Cc03_g06340 Coffea canephora HOM05D006581 ORTHO05D007870 9.4e-249 864.0 793 56.2
Peaxi162Scf00620g00237 Petunia axillaris HOM05D006581 ORTHO05D007870 1.2e-248 863.6 809 57.2
Sopen08g028170 Solanum pennellii HOM05D006581 ORTHO05D007870 1.6e-248 863.2 801 57.1
Nn3g19980 Nelumbo nucifera HOM05D006581 ORTHO05D007870 3.0e-247 859.0 797 55.8
PGSC0003DMG400003942 Solanum tuberosum HOM05D006581 ORTHO05D007870 5.7e-246 854.7 812 56.2
DCAR_000885 Daucus carota HOM05D006581 ORTHO05D007870 7.4e-246 854.4 800 56.4
Oeu001905.1 Olea europaea HOM05D006581 ORTHO05D007870 3.8e-242 842.0 793 57.1
TWI38G0425 Tripterygium wilfordii HOM05D006581 ORTHO05D007870 8.5e-242 840.9 823 54.9
Lalb_Chr01g0006991 Lupinus albus HOM05D006581 ORTHO05D007870 1.2e-240 837.0 834 54.1
Lj3g0012962 Lotus japonicus HOM05D006581 ORTHO05D007870 2.7e-240 835.9 837 54.4
PSO478G1557 Papaver somniferum HOM05D006581 ORTHO05D007870 4.7e-240 835.1 814 54.5
PSO782G3179 Papaver somniferum HOM05D006581 ORTHO05D007870 1.4e-239 833.6 815 54.5
Nitab4.5_0005167g0030 Nicotiana tabacum HOM05D006581 ORTHO05D007870 6.7e-239 831.2 812 54.9
Migut.E01071 Erythranthe guttata HOM05D006581 ORTHO05D007870 4.4e-238 828.6 795 55.6
ECA233G4444 Erigeron canadensis HOM05D006581 ORTHO05D007870 2.4e-236 822.8 834 54.1
Ca_14132_v3 Cicer arietinum L. HOM05D006581 ORTHO05D007870 4.1e-236 822.0 811 53.5
Aqoxy7G00548 Aquilegia oxysepala HOM05D006581 ORTHO05D007870 6.5e-234 814.7 805 53.9
Hund14684 Selenicereus undatus HOM05D006581 ORTHO05D007870 2.5e-233 812.8 799 54.4
Lsat_1_v5_gn_8_138880 Lactuca sativa HOM05D006581 ORTHO05D007870 4.2e-233 812.0 812 54.6
arahy.Tifrunner.gnm1.ann1.J373DC Arachis hypogaea HOM05D006581 ORTHO05D007870 4.7e-232 808.5 834 52.2
arahy.Tifrunner.gnm1.ann1.MU0C19 Arachis hypogaea HOM05D006581 ORTHO05D007870 2.3e-231 806.2 834 51.9
Manes.10G064500 Manihot esculenta HOM05D006581 ORTHO05D007870 5.2e-231 805.1 815 53.1
EL10Ac5g12666 Beta vulgaris HOM05D006581 ORTHO05D007870 3.4e-230 802.4 826 52.2
FAN07G0243 Fragaria x ananassa HOM05D006581 ORTHO05D007870 1.1e-228 797.3 817 53.9
TPR.G5149 Trifolium pratense HOM05D006581 ORTHO05D007870 9.1e-228 794.3 803 53.2
SGA_v2.0_scaffold196G40922 Striga asiatica HOM05D006581 ORTHO05D007870 4.2e-225 785.4 816 53.3
Psat7g256920 Pisum sativum HOM05D006581 ORTHO05D007870 2.3e-223 779.6 806 52.1
COL.COLO4_10009 Corchorus olitorius HOM05D006581 ORTHO05D007870 1.5e-222 776.9 814 51.8
THA.LOC104812128 Tarenaya hassleriana HOM05D006581 ORTHO05D007870 3.1e-220 769.2 792 51.9
Medtr3g010350 Medicago truncatula HOM05D006581 ORTHO05D007870 2.7e-219 766.1 817 51.4
Aa31LG4G4270 Aethionema arabicum HOM05D006581 ORTHO05D007870 5.0e-218 761.9 805 50.2
Ah.02g116280 Amaranthus hybridus HOM05D006581 ORTHO05D007870 3.6e-216 755.7 808 52.1
AT1G73970 Arabidopsis thaliana HOM05D006581 ORTHO05D007870 3.0e-215 752.7 798 50.9
CARHR067090 Cardamine hirsuta HOM05D006581 ORTHO05D007870 2.0e-214 750.0 803 50.7
Lj8C252T14 Lonicera japonica HOM05D006581 ORTHO05D007870 1.7e-213 746.9 800 52.4
MBI12_g26094_MAGBIO Magnolia biondii HOM05D006581 ORTHO05D007870 4.1e-212 742.3 805 51.6
AL2G33810 Arabidopsis lyrata HOM05D006581 ORTHO05D007870 5.4e-212 741.9 798 50.4
HanXRQChr04g0124681 Helianthus annuus HOM05D006581 ORTHO05D007870 1.6e-211 740.3 767 53.2
Sp5g29170 Schrenkiella parvula HOM05D006581 ORTHO05D007870 1.3e-210 737.3 799 50.1
AUR62040923 Chenopodium quinoa HOM05D006581 ORTHO05D007870 5.0e-210 735.3 742 53.4
Thhalv10018136m.g Eutrema salsugineum HOM05D006581 ORTHO05D007870 8.6e-210 734.6 797 50.2
AUR62004835 Chenopodium quinoa HOM05D006581 ORTHO05D007870 2.5e-209 733.0 742 53.5
Glyma.06G323200 Glycine max HOM05D006581 ORTHO05D007870 1.8e-207 726.9 847 50.9
A07p39830 Brassica napus HOM05D006581 ORTHO05D007870 1.5e-206 723.8 793 50.1
BraA07t31529Z Brassica rapa HOM05D006581 ORTHO05D007870 1.5e-206 723.8 793 50.1
C06p48090 Brassica napus HOM05D003462 ORTHO05D007870 2.9e-205 719.5 796 50.0
BolC6t39844H Brassica oleracea HOM05D006581 ORTHO05D007870 2.9e-205 719.5 825 48.8
Carub.0002s2075 Capsella rubella HOM05D006581 ORTHO05D007870 8.3e-205 718.0 815 48.7
Phvul.005G003000 Phaseolus vulgaris HOM05D006581 ORTHO05D007870 3.3e-201 706.1 847 49.1
SalBow7G1099 Salvia bowleyana HOM05D006581 ORTHO05D007870 5.8e-198 695.3 794 51.1
BcaC08g46826 Brassica carinata HOM05D006581 ORTHO05D007870 2.9e-197 693.0 797 48.8
VMungo1080G1314 Vigna mungo HOM05D006581 ORTHO05D007870 3.7e-197 692.6 818 48.5
Dinv39047 Davidia involucrata HOM05D006581 ORTHO05D007870 1.6e-195 687.2 654 56.6
SHI19174 Sapria himalayana HOM05D006581 ORTHO05D007870 1.1e-193 681.0 836 46.2
FAN17G3070 Fragaria x ananassa HOM05D006581 ORTHO05D007870 1.6e-192 677.2 609 58.0
Dinv37725 Davidia involucrata HOM05D006581 ORTHO05D007870 5.2e-191 672.2 614 59.0
unitig_26.g9687 Utricularia gibba HOM05D006581 ORTHO05D007870 4.9e-189 665.6 789 45.2
ATR0757G052 Amborella trichopoda HOM05D006581 ORTHO05D007870 2.7e-171 606.7 804 42.8
Hma1.2p1_0017F.1_g011230 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 1.2e-163 581.3 552 58.2
MBI12_g05899_MAGBIO Magnolia biondii HOM05D006581 ORTHO05D007870 1.8e-162 577.4 739 47.4
CDE05G1723 Ceratophyllum demersum HOM05D006581 ORTHO05D007870 3.9e-162 576.2 786 43.1
Sc01g0009010 Simmondsia chinensis HOM05D006581 ORTHO05D007870 1.1e-156 558.1 610 50.0
Eucgr.E00519 Eucalyptus grandis HOM05D006581 ORTHO05D007870 1.6e-144 517.7 583 50.6
vmacro14025 Vaccinium macrocarpon HOM05D006581 ORTHO05D007870 1.8e-138 497.7 419 60.6
CSS0016486 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 3.9e-138 496.5 484 56.6
Zm00001eb230550 Zea mays HOM05D006581 ORTHO05D007870 1.3e-128 464.9 621 42.8
Hma1.2p1_0138F.1_g062900 Hydrangea macrophylla HOM05D006581 ORTHO05D007870 1.2e-121 441.8 796 39.6
Medtr4g059740 Medicago truncatula HOM05D006581 ORTHO05D007870 1.4e-114 418.3 518 47.9
Ciclev10017584m.g Citrus clementina HOM05D006581 ORTHO05D007870 1.5e-113 414.8 345 62.3
Ciclev10006485m.g Citrus clementina HOM05D006581 ORTHO05D007870 3.0e-98 364.0 302 61.6
Mapoly0035s0119 Marchantia polymorpha HOM05D006581 ORTHO05D007870 2.1e-91 341.3 909 28.9
Pp3c5_4510 Physcomitrium patens HOM05D006581 ORTHO05D007870 1.1e-87 328.9 861 28.3
Migut.J01229 Erythranthe guttata HOM05D006581 ORTHO05D007870 1.6e-86 325.1 264 61.4
Ciclev10006576m.g Citrus clementina HOM05D006581 ORTHO05D007870 4.3e-84 317.0 290 57.2
CSS0046982 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 2.0e-81 308.1 487 44.8
SMO118G0399 Selaginella moellendorffii HOM05D006581 ORTHO05D007870 3.8e-72 277.3 812 28.2
CSS0026570 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 1.7e-69 268.5 196 67.9
Eucgr.E00518 Eucalyptus grandis HOM05D006581 ORTHO05D007870 6.4e-64 250.0 213 58.2
SEGI_20261 Sequoiadendron giganteum HOM05D006581 ORTHO05D007870 9.9e-57 226.1 236 47.5
AagrBONN_evm.TU.Sc2ySwM_228.3501 Anthoceros agrestis HOM05D006581 ORTHO05D007870 7.9e-54 216.5 524 28.4
Os02g0123400 Oryza sativa ssp. japonica HOM05D006581 ORTHO05D007870 4.3e-52 210.7 372 36.8
SEGI_01852 Sequoiadendron giganteum HOM05D006581 ORTHO05D007870 2.4e-50 204.9 574 31.5
CSS0037330 Camellia sinensis var. sinensis HOM05D006581 ORTHO05D007870 6.0e-38 163.7 196 45.9
Sabra10G0190600 Salix brachista HOM05D006581 ORTHO05D007870 6.1e-22 110.5 153 42.5
Lj8P252T34 Lonicera japonica HOM05D006581 ORTHO05D007870 1.3e-19 102.8 71 66.2
CBR_g52136 Chara braunii HOM05D006581 ORTHO05D007870 5.5e-15 87.4 614 20.2


User provided reference genes

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