Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_3G000300 Cucumis sativus L. HOM05D006972 ORTHO05D008519 5.7e-104 380.9 195 100.0
MELO3C013724.2 Cucumis melo HOM05D006972 ORTHO05D008519 2.5e-99 365.5 192 97.4
Sed0027466 Sechium edule HOM05D006972 ORTHO05D008519 1.6e-93 346.3 192 90.6
ClCG10G000270 Citrullus lanatus HOM05D006972 ORTHO05D008519 6.5e-92 340.9 185 93.5
Manes.01G155400 Manihot esculenta HOM05D006972 ORTHO05D008519 1.2e-80 303.5 191 77.0
RcHm_v2.0_Chr2g0097181 Rosa chinensis HOM05D006972 ORTHO05D008519 1.8e-78 296.2 192 74.5
Prupe.7G182900 Prunus persica HOM05D006972 ORTHO05D008519 2.4e-78 295.8 192 75.5
Eucgr.I02225 Eucalyptus grandis HOM05D006972 ORTHO05D008519 4.1e-78 295.0 192 75.0
TAR628G0904 Trochodendron aralioides HOM05D006972 ORTHO05D008519 5.4e-78 294.7 191 74.3
Potri.005G101501 Populus trichocarpa HOM05D006972 ORTHO05D008519 1.2e-77 293.5 184 77.7
FAN19G2622 Fragaria x ananassa HOM05D006972 ORTHO05D008519 4.5e-77 291.6 189 74.1
Atru.chr3.134 Acer truncatum HOM05D006972 ORTHO05D008519 5.9e-77 291.2 193 74.1
MSTRG.3630 Avicennia marina HOM05D006972 ORTHO05D008519 2.3e-76 289.3 189 75.7
TWI73G0968 Tripterygium wilfordii HOM05D006972 ORTHO05D008519 2.3e-76 289.3 188 74.5
CSS0043244 Camellia sinensis var. sinensis HOM05D006972 ORTHO05D008519 5.0e-76 288.1 191 73.3
GSVIVG01026641001 Vitis vinifera HOM05D006972 ORTHO05D008519 1.1e-75 287.0 191 73.8
QL06p052953 Quercus lobata HOM05D006972 ORTHO05D008519 1.9e-75 286.2 214 67.3
Rhsim10G0195900 Rhododendron simsii HOM05D006972 ORTHO05D008519 1.9e-75 286.2 188 73.4
Glyma.01G158800 Glycine max HOM05D006972 ORTHO05D008519 3.2e-75 285.4 189 75.7
Oeu012451.1 Olea europaea HOM05D006972 ORTHO05D008519 4.2e-75 285.0 190 71.6
Actinidia17360 Actinidia chinensis HOM05D006972 ORTHO05D008519 9.5e-75 283.9 191 73.8
Cfa007077 Carpinus fangiana HOM05D006972 ORTHO05D008519 1.2e-74 283.5 191 70.7
CiPaw.08G181600 Carya illinoinensis HOM05D006972 ORTHO05D008519 3.6e-74 282.0 189 72.0
CANSAT25G3183 Cannabis sativa HOM05D006972 ORTHO05D008519 4.7e-74 281.6 187 74.3
Cc07_g11850 Coffea canephora HOM05D006972 ORTHO05D008519 6.1e-74 281.2 186 73.7
TPR.G33865 Trifolium pratense HOM05D006972 ORTHO05D008519 1.8e-73 279.6 189 72.5
Haze_03655 Corylus avellana HOM05D006972 ORTHO05D008519 2.3e-73 279.3 182 73.6
Aqoxy5G01011 Aquilegia oxysepala HOM05D006972 ORTHO05D008519 3.0e-73 278.9 191 72.3
vmacro20633 Vaccinium macrocarpon HOM05D006972 ORTHO05D008519 3.0e-73 278.9 188 70.7
Cpa.g.sc365.5 Carica papaya HOM05D006972 ORTHO05D008519 4.0e-73 278.5 192 69.8
Nitab4.5_0000495g0120 Nicotiana tabacum HOM05D006972 ORTHO05D008519 4.0e-73 278.5 191 71.2
Lalb_Chr16g0380011 Lupinus albus HOM05D006972 ORTHO05D008519 6.8e-73 277.7 189 73.5
Nitab4.5_0005297g0020 Nicotiana tabacum HOM05D006972 ORTHO05D008519 8.8e-73 277.3 191 72.3
Solyc03g032120.3 Solanum lycopersicum HOM05D006972 ORTHO05D008519 1.2e-72 276.9 191 69.6
Psat2g148200 Pisum sativum HOM05D006972 ORTHO05D008519 1.5e-72 276.6 189 72.5
Ciclev10026547m.g Citrus clementina HOM05D006972 ORTHO05D008519 2.6e-72 275.8 189 71.4
Ca_24981_v3 Cicer arietinum L. HOM05D006972 ORTHO05D008519 4.4e-72 275.0 189 71.4
Lsat_1_v5_gn_2_73640 Lactuca sativa HOM05D006972 ORTHO05D008519 7.5e-72 274.2 189 70.4
MBI05_g14344_MAGBIO Magnolia biondii HOM05D006972 ORTHO05D008519 2.2e-71 272.7 195 69.2
Nn5g30989 Nelumbo nucifera HOM05D006972 ORTHO05D008519 3.7e-71 271.9 177 73.4
SalBow5G0785 Salvia bowleyana HOM05D006972 ORTHO05D008519 4.9e-71 271.6 190 68.4
ATR0807G046 Amborella trichopoda HOM05D006972 ORTHO05D008519 1.8e-70 269.6 189 70.4
AL8G45620 Arabidopsis lyrata HOM05D006972 ORTHO05D008519 2.4e-70 269.2 192 69.3
Migut.L00961 Erythranthe guttata HOM05D006972 ORTHO05D008519 2.4e-70 269.2 191 68.6
EL10Ac5g11121 Beta vulgaris HOM05D006972 ORTHO05D008519 3.1e-70 268.9 192 66.1
HanXRQChr14g0442531 Helianthus annuus HOM05D006972 ORTHO05D008519 7.0e-70 267.7 189 69.3
Hund19696 Selenicereus undatus HOM05D006972 ORTHO05D008519 1.6e-69 266.5 192 65.1
Zm00001eb002450 Zea mays HOM05D006972 ORTHO05D008519 1.6e-69 266.5 188 67.0
ECA238G2655 Erigeron canadensis HOM05D006972 ORTHO05D008519 2.0e-69 266.2 186 71.0
THA.LOC104826441 Tarenaya hassleriana HOM05D006972 ORTHO05D008519 2.7e-69 265.8 189 68.8
Duzib147G0479 Durio zibethinus HOM05D006972 ORTHO05D008519 4.5e-69 265.0 189 66.1
Phvul.002G116601 Phaseolus vulgaris HOM05D006972 ORTHO05D008519 4.5e-69 265.0 189 70.9
Gohir.D07G177900 Gossypium hirsutum HOM05D006972 ORTHO05D008519 5.0e-68 261.5 189 65.1
Thecc.01G005600 Theobroma cacao HOM05D006972 ORTHO05D008519 5.0e-68 261.5 189 64.6
AUR62021571 Chenopodium quinoa HOM05D006972 ORTHO05D008519 8.6e-68 260.8 188 66.0
PSO541G2195 Papaver somniferum HOM05D006972 ORTHO05D008519 8.6e-68 260.8 186 71.0
AT5G66005 Arabidopsis thaliana HOM05D006972 ORTHO05D008519 1.5e-67 260.0 192 66.7
VMungo1215G1992 Vigna mungo HOM05D006972 ORTHO05D008519 1.9e-67 259.6 189 69.8
Lj2g0018473 Lotus japonicus HOM05D006972 ORTHO05D008519 2.5e-67 259.2 167 76.0
Gohir.A07G171100 Gossypium hirsutum HOM05D006972 ORTHO05D008519 3.3e-67 258.8 185 65.9
CAN.G354.14 Capsicum annuum HOM05D006972 ORTHO05D008519 4.3e-67 258.5 177 71.2
AUR62008520 Chenopodium quinoa HOM05D006972 ORTHO05D008519 5.6e-67 258.1 188 65.4
Gorai.001G199000 Gossypium raimondii HOM05D006972 ORTHO05D008519 2.1e-66 256.1 185 65.4
Ah.02g113990 Amaranthus hybridus HOM05D006972 ORTHO05D008519 1.8e-65 253.1 187 62.0
FvH4_1g10330 Fragaria vesca HOM05D006972 ORTHO05D008519 1.8e-65 253.1 153 79.7
PSO675G3277 Papaver somniferum HOM05D006972 ORTHO05D008519 1.8e-65 253.1 167 74.3
CDE04G1133 Ceratophyllum demersum HOM05D006972 ORTHO05D008519 1.5e-64 250.0 175 69.1
arahy.Tifrunner.gnm1.ann1.B19VPR Arachis hypogaea HOM05D006972 ORTHO05D008519 2.6e-64 249.2 161 75.8
arahy.Tifrunner.gnm1.ann1.K20VQB Arachis hypogaea HOM05D006972 ORTHO05D008519 2.6e-64 249.2 161 75.8
Haze_03661 Corylus avellana HOM05D006972 ORTHO05D008519 5.7e-64 248.1 154 77.3
FAN23G2574 Fragaria x ananassa HOM05D006972 ORTHO05D008519 9.8e-64 247.3 229 57.2
Medtr5g024200 Medicago truncatula HOM05D006972 ORTHO05D008519 1.8e-62 243.0 160 75.0
HPP92_026034 Vanilla planifolia HOM05D006972 ORTHO05D008519 5.4e-62 241.5 186 62.9
Sc03g0003950 Simmondsia chinensis HOM05D006972 ORTHO05D008519 1.3e-60 236.9 154 72.7
COL.COLO4_24144 Corchorus olitorius HOM05D006972 ORTHO05D008519 3.9e-60 235.3 167 67.1
SGA_v2.0_scaffold132G34519 Striga asiatica HOM05D006972 ORTHO05D008519 6.6e-60 234.6 170 68.2
Carub.0008s2851 Capsella rubella HOM05D006972 ORTHO05D008519 8.0e-58 227.6 197 60.9
RcHm_v2.0_Chr1g0346531 Rosa chinensis HOM05D006972 ORTHO05D008519 4.0e-57 225.3 138 79.7
RcHm_v2.0_Chr2g0090391 Rosa chinensis HOM05D006972 ORTHO05D008519 6.8e-57 224.6 138 79.7
FAN26G0227 Fragaria x ananassa HOM05D006972 ORTHO05D008519 2.9e-47 192.6 153 66.0
FAN28G2862 Fragaria x ananassa HOM05D006972 ORTHO05D008519 1.3e-44 183.7 109 79.8
Peaxi162Scf00122g02416 Petunia axillaris HOM05D006972 ORTHO05D008519 1.3e-44 183.7 120 73.3
unitig_747.g21812 Utricularia gibba HOM05D006972 ORTHO05D008519 1.7e-44 183.3 204 50.0
MD15G1231300 Malus domestica HOM05D006972 ORTHO05D008519 1.9e-43 179.9 124 68.5
Os03g0130750 Oryza sativa ssp. japonica HOM05D006972 ORTHO05D008519 1.1e-41 174.1 125 67.2
Mapoly0114s0024 Marchantia polymorpha HOM05D006972 ORTHO05D008519 2.0e-40 169.9 212 48.1
Sopen03g005970 Solanum pennellii HOM05D006972 ORTHO05D008519 4.6e-37 158.7 103 71.8
Lsat_1_v5_gn_5_10160 Lactuca sativa HOM05D006972 ORTHO05D008519 1.5e-35 153.7 107 72.9
SMO352G0055 Selaginella moellendorffii HOM05D006972 ORTHO05D008519 2.0e-32 143.3 133 57.9
RcHm_v2.0_Chr5g0047551 Rosa chinensis HOM05D006972 ORTHO05D008519 2.7e-29 132.9 78 80.8
CANSAT35G0485 Cannabis sativa HOM05D006972 ORTHO05D008519 6.6e-28 128.3 90 71.1
RcHm_v2.0_Chr5g0015201 Rosa chinensis HOM05D006972 ORTHO05D008519 2.8e-26 122.9 70 82.9
MD15G1231400 Malus domestica HOM05D006972 ORTHO05D008519 2.4e-25 119.8 75 73.3
Cre16.g682050 Chlamydomonas reinhardtii HOM05D006972 ORTHO05D008519 1.2e-24 117.5 193 38.9
Glyma.11G085800 Glycine max HOM05D006972 ORTHO05D008519 1.3e-23 114.0 136 48.5
MCO16G109 Micromonas commoda HOM05D006972 ORTHO05D008519 7.1e-22 108.2 185 38.4
Actinidia22899 Actinidia chinensis HOM05D006972 ORTHO05D008519 6.0e-21 105.1 74 68.9
Mapoly0023s0154 Marchantia polymorpha HOM05D006972 ORTHO05D008519 2.3e-20 103.2 185 34.6
SMO147G0393 Selaginella moellendorffii HOM05D006972 ORTHO05D008519 3.0e-20 102.8 130 36.9
Lsat_1_v5_gn_1_125281 Lactuca sativa HOM05D006972 ORTHO05D008519 1.9e-19 100.1 75 68.0
Lsat_1_v5_gn_8_30121 Lactuca sativa HOM05D006972 ORTHO05D008519 1.3e-18 97.4 59 83.1
Pp3c7_7150 Physcomitrium patens HOM05D006972 ORTHO05D008519 2.1e-18 96.7 177 35.0
Pp3c11_19180 Physcomitrium patens HOM05D006972 ORTHO05D008519 3.7e-18 95.9 185 33.5
arahy.Tifrunner.gnm1.ann1.9GY3HT Arachis hypogaea HOM05D006972 ORTHO05D008519 7.6e-16 88.2 78 55.1
CBR_g19759 Chara braunii HOM05D006972 ORTHO05D008519 4.9e-15 85.5 136 41.9
PRCOL_00004399 Prasinoderma coloniale HOM05D006972 ORTHO05D008519 3.2e-14 82.8 166 36.1
arahy.Tifrunner.gnm1.ann1.J6JT3S Arachis hypogaea HOM05D006972 ORTHO05D008519 6.0e-13 78.6 56 64.3
MD02G1111700 Malus domestica HOM05D006972 ORTHO05D008519 4.8e-10 68.9 52 59.6
arahy.Tifrunner.gnm1.ann1.A1T4XS Arachis hypogaea HOM05D006972 ORTHO05D008519 2.4e-09 66.6 59 52.5
arahy.Tifrunner.gnm1.ann1.BGC890 Arachis hypogaea HOM05D006972 ORTHO05D008519 2.2e-07 60.1 61 47.5
RcHm_v2.0_Chr5g0015211 Rosa chinensis HOM05D006972 ORTHO05D008519 4.9e-07 58.9 33 81.8
Lsat_1_v5_gn_3_12301 Lactuca sativa HOM05D035019 ORTHO05D008519 3.2e-06 56.2 32 78.1
Lsat_1_v5_gn_8_143201 Lactuca sativa HOM05D035019 ORTHO05D008519 3.2e-06 56.2 32 78.1
Lsat_1_v5_gn_4_168241 Lactuca sativa HOM05D035019 ORTHO05D008519 9.3e-06 54.7 31 77.4


User provided reference genes

Program Settings