Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_2G035780 Cucumis sativus L. HOM05D008649 ORTHO05D000034 1.1e-72 276.6 140 100.0
ClCG01G012390 Citrullus lanatus HOM05D000004 ORTHO05D000034 7.9e-15 84.3 54 75.9
ClCG10G007890 Citrullus lanatus HOM05D000004 ORTHO05D000002 1.8e-14 83.2 54 74.1
ClCG04G003440 Citrullus lanatus HOM05D000004 ORTHO05D000034 2.3e-14 82.8 54 74.1
ClCG09G014120 Citrullus lanatus HOM05D000004 ORTHO05D000034 3.0e-14 82.4 54 74.1
ClCG08G003900 Citrullus lanatus HOM05D000004 ORTHO05D000002 2.1e-12 76.3 51 74.5
ClCG02G010440 Citrullus lanatus HOM05D000004 ORTHO05D000002 2.4e-11 72.8 57 59.6
Sed0000778 Sechium edule HOM05D000004 ORTHO05D000034 3.1e-11 72.4 51 70.6
ClCG07G006740 Citrullus lanatus HOM05D000004 ORTHO05D000002 1.5e-10 70.1 47 74.5
ClCG01G012830 Citrullus lanatus HOM05D008284 ORTHO05D000034 5.9e-10 68.2 52 65.4
CsaV3_5G014780 Cucumis sativus L. HOM05D008284 ORTHO05D000034 1.7e-09 66.6 48 68.8
MELO3C029130.2 Cucumis melo HOM05D008649 ORTHO05D000224 2.2e-09 66.2 99 39.4
MELO3C030157.2 Cucumis melo HOM05D008649 ORTHO05D009980 3.8e-09 65.5 55 58.2
MELO3C033978.2 Cucumis melo HOM05D008649 ORTHO05D000034 3.8e-09 65.5 55 58.2
MELO3C032168.2 Cucumis melo HOM05D007786 ORTHO05D000224 8.5e-09 64.3 55 56.4
MELO3C033143.2 Cucumis melo HOM05D008284 ORTHO05D000034 1.4e-08 63.5 41 75.6
Oeu016214.1 Olea europaea HOM05D000004 ORTHO05D000224 4.2e-08 62.0 73 42.5
CsaV3_5G014550 Cucumis sativus L. HOM05D024314 ORTHO05D000034 7.2e-08 61.2 53 54.7
Oeu056160.1 Olea europaea HOM05D000004 ORTHO05D000224 7.2e-08 61.2 73 42.5
MELO3C030797.2 Cucumis melo HOM05D000004 ORTHO05D000002 9.3e-08 60.8 55 52.7
Oeu055711.1 Olea europaea HOM05D008284 ORTHO05D000224 9.3e-08 60.8 64 48.4
ClCG04G002120 Citrullus lanatus HOM05D059276 ORTHO05D150319 1.2e-07 60.5 39 71.8
Manes.10G099101 Manihot esculenta HOM05D000004 ORTHO05D000034 1.6e-07 60.1 62 50.0
Oeu022994.1 Olea europaea HOM05D008284 ORTHO05D000224 1.6e-07 60.1 56 53.6
Manes.16G051801 Manihot esculenta HOM05D000004 ORTHO05D000034 2.7e-07 59.3 70 44.3
Oeu029917.1 Olea europaea HOM05D000004 ORTHO05D000224 2.7e-07 59.3 57 52.6
Oeu000030.1 Olea europaea HOM05D000004 ORTHO05D000224 3.6e-07 58.9 63 47.6
Oeu033066.1 Olea europaea HOM05D008284 ORTHO05D000224 3.6e-07 58.9 90 36.7
Manes.07G076922 Manihot esculenta HOM05D000004 ORTHO05D000034 6.1e-07 58.2 62 48.4
Manes.08G134411 Manihot esculenta HOM05D000004 ORTHO05D000034 6.1e-07 58.2 62 48.4
Manes.15G183710 Manihot esculenta HOM05D000004 ORTHO05D000034 6.1e-07 58.2 62 48.4
Manes.18G144913 Manihot esculenta HOM05D000004 ORTHO05D000034 6.1e-07 58.2 62 48.4
Oeu018971.1 Olea europaea HOM05D008284 ORTHO05D000224 6.1e-07 58.2 50 54.0
Oeu050755.1 Olea europaea HOM05D008284 ORTHO05D000034 6.1e-07 58.2 77 40.3
ClCG01G011330 Citrullus lanatus HOM05D008284 ORTHO05D028991 7.9e-07 57.8 44 63.6
Manes.18G139308 Manihot esculenta HOM05D000004 ORTHO05D000034 7.9e-07 57.8 62 46.8
Oeu045843.1 Olea europaea HOM05D008284 ORTHO05D000224 7.9e-07 57.8 64 43.8
PGR068G0002 Punica granatum HOM05D000004 ORTHO05D000034 7.9e-07 57.8 59 45.8
MELO3C033510.2 Cucumis melo HOM05D008649 ORTHO05D009980 1.0e-06 57.4 55 49.1
Manes.16G075950 Manihot esculenta HOM05D000004 ORTHO05D000034 1.0e-06 57.4 49 55.1
Oeu047013.1 Olea europaea HOM05D008284 ORTHO05D000034 1.0e-06 57.4 64 45.3
Manes.14G148397 Manihot esculenta HOM05D000004 ORTHO05D000034 1.3e-06 57.0 62 46.8
Manes.14G148419 Manihot esculenta HOM05D000004 ORTHO05D000034 1.3e-06 57.0 62 46.8
QL11p016154 Quercus lobata HOM05D000567 ORTHO05D000224 1.3e-06 57.0 86 38.4
MELO3C034471.2 Cucumis melo HOM05D007786 ORTHO05D009980 1.8e-06 56.6 62 48.4
Manes.18G140597 Manihot esculenta HOM05D000004 ORTHO05D000034 1.8e-06 56.6 62 45.2
Oeu002304.1 Olea europaea HOM05D000004 ORTHO05D000224 1.8e-06 56.6 60 48.3
QL04p087838 Quercus lobata HOM05D000004 ORTHO05D000002 1.8e-06 56.6 62 37.1
Oeu016211.1 Olea europaea HOM05D000004 ORTHO05D000224 2.3e-06 56.2 93 36.6
Oeu017575.1 Olea europaea HOM05D000004 ORTHO05D000034 2.3e-06 56.2 74 40.5
Rhsim03G0130600 Rhododendron simsii HOM05D000004 ORTHO05D000034 2.3e-06 56.2 52 50.0
Oeu019592.1 Olea europaea HOM05D008284 ORTHO05D000224 3.0e-06 55.8 50 52.0
Rhsim06G0134400 Rhododendron simsii HOM05D000004 ORTHO05D000034 3.0e-06 55.8 52 51.9
Rhsim07G0206500 Rhododendron simsii HOM05D000004 ORTHO05D000224 3.0e-06 55.8 52 51.9
Rhsim11G0017800 Rhododendron simsii HOM05D000004 ORTHO05D000224 3.0e-06 55.8 52 51.9
Manes.01G066666 Manihot esculenta HOM05D000004 ORTHO05D000034 3.9e-06 55.5 62 45.2
MELO3C015125.2 Cucumis melo HOM05D000004 ORTHO05D000034 5.1e-06 55.1 61 44.3
CsaV3_6G013010 Cucumis sativus L. HOM05D007014 ORTHO05D008894 5.1e-06 55.1 56 46.4
Oeu043235.1 Olea europaea HOM05D008284 ORTHO05D000224 5.1e-06 55.1 64 45.3
PGR096G0003 Punica granatum HOM05D000004 ORTHO05D000002 5.1e-06 55.1 57 45.6
ClCG10G005360 Citrullus lanatus HOM05D003917 ORTHO05D005104 6.7e-06 54.7 44 68.2
Oeu022659.1 Olea europaea HOM05D000004 ORTHO05D000224 6.7e-06 54.7 74 39.2
Oeu055756.1 Olea europaea HOM05D008284 ORTHO05D000224 6.7e-06 54.7 72 38.9
Rhsim02G0020600 Rhododendron simsii HOM05D000004 ORTHO05D000224 6.7e-06 54.7 52 50.0
Rhsim04G0149400 Rhododendron simsii HOM05D000004 ORTHO05D000224 8.7e-06 54.3 52 50.0
Rhsim11G0061300 Rhododendron simsii HOM05D000004 ORTHO05D000224 8.7e-06 54.3 52 48.1


User provided reference genes

Program Settings