Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_2G034760 Cucumis sativus L. HOM05D000003 ORTHO05D000006 1.6e-61 239.2 116 100.0
CsaV3_7G000110 Cucumis sativus L. HOM05D000003 ORTHO05D000006 2.0e-19 99.4 114 42.1
MELO3C022264.2 Cucumis melo HOM05D000003 ORTHO05D000004 7.0e-17 90.9 98 42.9
ClCG10G010380 Citrullus lanatus HOM05D014232 ORTHO05D000006 2.7e-13 79.0 100 39.0
Cpa.g.sc58.83 Carica papaya HOM05D000003 ORTHO05D000006 1.0e-12 77.0 102 34.3
ClCG04G002540 Citrullus lanatus HOM05D014232 ORTHO05D000006 1.0e-12 77.0 107 36.4
Sed0018530 Sechium edule HOM05D000003 ORTHO05D000006 2.3e-12 75.9 100 36.0
Cpa.g.sc74.30 Carica papaya HOM05D000003 ORTHO05D000006 3.0e-12 75.5 107 34.6
CANSAT56G3715 Cannabis sativa HOM05D000003 ORTHO05D000006 1.7e-10 69.7 91 31.9
Cpa.g.sc846.1 Carica papaya HOM05D000003 ORTHO05D000006 2.2e-10 69.3 100 29.0
Cpa.g.sc9.33 Carica papaya HOM05D000003 ORTHO05D000006 2.2e-10 69.3 106 34.9
CSS0042633 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 3.7e-10 68.6 91 37.4
Cpa.g.sc1440.2 Carica papaya HOM05D000003 ORTHO05D016192 8.3e-10 67.4 108 33.3
CSS0036946 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.4e-09 66.6 69 37.7
Cpa.g.sc47.30 Carica papaya HOM05D000003 ORTHO05D000006 1.4e-09 66.6 92 30.4
CsaV3_3G045600 Cucumis sativus L. HOM05D000003 ORTHO05D000006 1.8e-09 66.2 48 54.2
TPR.G18505 Trifolium pratense HOM05D000003 ORTHO05D000004 2.4e-09 65.9 89 31.5
QL01p050350 Quercus lobata HOM05D000003 ORTHO05D000004 5.4e-09 64.7 102 33.3
CSS0031434 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 7.0e-09 64.3 97 35.1
CANSAT11G2262 Cannabis sativa HOM05D000003 ORTHO05D000006 7.0e-09 64.3 92 30.4
QL04p049443 Quercus lobata HOM05D000279 ORTHO05D000957 7.0e-09 64.3 101 32.7
Sed0002431 Sechium edule HOM05D000003 ORTHO05D000006 7.0e-09 64.3 106 28.3
Cpa.g.sc74.39 Carica papaya HOM05D016174 ORTHO05D000006 2.0e-08 62.8 88 33.0
Cpa.g.sc18.97 Carica papaya HOM05D010178 ORTHO05D000006 2.7e-08 62.4 91 30.8
Cpa.g.sc25.7 Carica papaya HOM05D000003 ORTHO05D000006 2.7e-08 62.4 99 34.3
Cpa.g.sc425.5 Carica papaya HOM05D000003 ORTHO05D000006 3.5e-08 62.0 105 33.3
PSO302G0244 Papaver somniferum HOM05D000003 ORTHO05D000006 3.5e-08 62.0 88 30.7
PSO339G6285 Papaver somniferum HOM05D000003 ORTHO05D000006 5.9e-08 61.2 91 28.6
Aqoxy2G01405 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.3e-07 60.1 85 35.3
Aqoxy2G01414 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 1.3e-07 60.1 85 35.3
TWI74G1519 Tripterygium wilfordii HOM05D000003 ORTHO05D000006 1.3e-07 60.1 104 27.9
CSS0031653 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 2.3e-07 59.3 93 31.2
TPR.G32401 Trifolium pratense HOM05D000003 ORTHO05D000004 2.3e-07 59.3 92 29.3
CSS0038431 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 2.9e-07 58.9 55 43.6
Cpa.g.sc47.24 Carica papaya HOM05D000003 ORTHO05D016192 2.9e-07 58.9 101 29.7
PSO832G3822 Papaver somniferum HOM05D000003 ORTHO05D000006 2.9e-07 58.9 100 29.0
Cpa.g.sc2373.2 Carica papaya HOM05D000003 ORTHO05D000006 3.8e-07 58.5 54 44.4
Aqoxy4G01140 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 5.0e-07 58.2 100 32.0
Aqoxy7G01438 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 5.0e-07 58.2 98 30.6
Cpa.g.sc15.72 Carica papaya HOM05D018111 ORTHO05D000006 5.0e-07 58.2 96 31.2
Cpa.g.sc167.23 Carica papaya HOM05D039512 ORTHO05D000006 5.0e-07 58.2 110 27.3
CiPaw.07G196000 Carya illinoinensis HOM05D000003 ORTHO05D000006 5.0e-07 58.2 98 30.6
QL03p044436 Quercus lobata HOM05D001046 ORTHO05D000006 5.0e-07 58.2 103 27.2
CsaV3_5G020200 Cucumis sativus L. HOM05D034645 ORTHO05D000006 6.6e-07 57.8 81 30.9
CSS0045139 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 8.6e-07 57.4 79 34.2
Cpa.g.sc17.59 Carica papaya HOM05D000003 ORTHO05D000006 8.6e-07 57.4 100 30.0
QL05p062582 Quercus lobata HOM05D000003 ORTHO05D000004 8.6e-07 57.4 100 28.0
CSS0004052 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.1e-06 57.0 101 32.7
TAR640G0001 Trochodendron aralioides HOM05D000003 ORTHO05D000004 1.1e-06 57.0 89 32.6
PSO541G0911 Papaver somniferum HOM05D000003 ORTHO05D000006 1.9e-06 56.2 107 25.2
Cpa.g.c39304 Carica papaya HOM05D000003 ORTHO05D000006 2.5e-06 55.8 93 30.1
QL08p023703 Quercus lobata HOM05D000003 ORTHO05D000006 2.5e-06 55.8 100 28.0
Cpa.g.c31806.2 Carica papaya HOM05D008736 ORTHO05D010193 3.3e-06 55.5 98 31.6
MBI09_g09410_MAGBIO Magnolia biondii HOM05D000003 ORTHO05D000004 4.2e-06 55.1 89 27.0
Aqoxy4G01286 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 5.5e-06 54.7 82 30.5
CSS0036634 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 5.5e-06 54.7 115 32.2
Cpa.g.sc34.165 Carica papaya HOM05D000003 ORTHO05D000006 7.2e-06 54.3 98 26.5
PSO017G6159 Papaver somniferum HOM05D000003 ORTHO05D000006 7.2e-06 54.3 69 29.0


User provided reference genes

Program Settings