Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_2G034120 Cucumis sativus L. HOM05D006878 ORTHO05D008579 4.8e-140 501.1 250 100.0
MELO3C008189.2 Cucumis melo HOM05D006878 ORTHO05D008579 1.5e-136 489.6 250 97.6
ClCG11G007130 Citrullus lanatus HOM05D006878 ORTHO05D008579 1.7e-129 466.1 250 93.2
Sed0002550 Sechium edule HOM05D006878 ORTHO05D008579 9.8e-125 450.3 250 90.0
Ciclev10016370m.g Citrus clementina HOM05D006878 ORTHO05D008579 7.3e-104 380.9 250 74.8
MD09G1010100 Malus domestica HOM05D006878 ORTHO05D008579 5.2e-102 374.8 238 77.7
Thecc.04G038000 Theobroma cacao HOM05D006878 ORTHO05D008579 1.2e-101 373.6 252 73.8
Rhsim08G0042400 Rhododendron simsii HOM05D006878 ORTHO05D008579 3.4e-101 372.1 254 73.2
CANSAT64G0355 Cannabis sativa HOM05D006878 ORTHO05D008579 7.5e-101 370.9 249 74.7
Duzib147G1327 Durio zibethinus HOM05D006878 ORTHO05D008579 1.3e-100 370.2 252 73.0
Prupe.3G307100 Prunus persica HOM05D006878 ORTHO05D008579 2.2e-100 369.4 244 76.6
TAR629G1805 Trochodendron aralioides HOM05D006878 ORTHO05D008579 1.9e-99 366.3 248 73.8
Potri.001G329300 Populus trichocarpa HOM05D006878 ORTHO05D008579 4.1e-99 365.2 251 72.5
TWI34G0743 Tripterygium wilfordii HOM05D006878 ORTHO05D008579 1.2e-98 363.6 241 73.9
GSVIVG01033083001 Vitis vinifera HOM05D006878 ORTHO05D008579 1.2e-98 363.6 248 74.2
Atru.chr6.2581 Acer truncatum HOM05D006878 ORTHO05D008579 2.7e-98 362.5 238 73.5
Actinidia05902 Actinidia chinensis HOM05D006878 ORTHO05D008579 2.7e-98 362.5 243 74.5
QL02p071231 Quercus lobata HOM05D006878 ORTHO05D008579 2.7e-98 362.5 280 68.2
COL.COLO4_13265 Corchorus olitorius HOM05D006878 ORTHO05D008579 6.0e-98 361.3 243 73.3
MD17G1000600 Malus domestica HOM05D006878 ORTHO05D008579 1.3e-97 360.1 241 74.3
vmacro18351 Vaccinium macrocarpon HOM05D006878 ORTHO05D008579 3.9e-97 358.6 262 69.5
Cfa007222 Carpinus fangiana HOM05D006878 ORTHO05D008579 6.6e-97 357.8 242 73.6
Manes.15G161800 Manihot esculenta HOM05D006878 ORTHO05D008579 8.6e-97 357.5 251 72.1
TPR.G38297 Trifolium pratense HOM05D006878 ORTHO05D008579 8.6e-97 357.5 255 72.2
Psat3g178400 Pisum sativum HOM05D006878 ORTHO05D008579 1.5e-96 356.7 253 70.8
TAR371G0275 Trochodendron aralioides HOM05D006878 ORTHO05D008579 1.5e-96 356.7 246 72.0
TWI34G1534 Tripterygium wilfordii HOM05D006878 ORTHO05D008579 1.9e-96 356.3 236 73.7
Sabra16G0210700 Salix brachista HOM05D006878 ORTHO05D008579 5.6e-96 354.8 251 70.9
Dinv33333 Davidia involucrata HOM05D006878 ORTHO05D008579 2.8e-95 352.4 251 72.5
CSS0033487 Camellia sinensis var. sinensis HOM05D006878 ORTHO05D008579 4.7e-95 351.7 239 73.2
CAN.G473.102 Capsicum annuum HOM05D006878 ORTHO05D008579 6.2e-95 351.3 254 70.5
TAR629G1038 Trochodendron aralioides HOM05D006878 ORTHO05D008579 8.1e-95 350.9 234 73.9
PGR142G3785 Punica granatum HOM05D006878 ORTHO05D008579 1.8e-94 349.7 247 70.0
Gohir.D07G235800 Gossypium hirsutum HOM05D006878 ORTHO05D008579 5.2e-94 348.2 238 72.7
Gorai.001G271700 Gossypium raimondii HOM05D006878 ORTHO05D008579 5.2e-94 348.2 238 73.1
DCAR_015107 Daucus carota HOM05D006878 ORTHO05D008579 2.0e-93 346.3 251 70.5
Gohir.A07G228800 Gossypium hirsutum HOM05D006878 ORTHO05D008579 2.6e-93 345.9 237 72.2
Cc07_g00890 Coffea canephora HOM05D006878 ORTHO05D008579 3.4e-93 345.5 248 70.2
Nitab4.5_0009844g0010 Nicotiana tabacum HOM05D006878 ORTHO05D008579 3.4e-93 345.5 255 67.8
VMungo1383G2452 Vigna mungo HOM05D006878 ORTHO05D008579 4.4e-93 345.1 254 69.7
HanXRQChr14g0450611 Helianthus annuus HOM05D006878 ORTHO05D008579 7.6e-93 344.4 243 71.6
Nitab4.5_0002050g0060 Nicotiana tabacum HOM05D006878 ORTHO05D008579 7.6e-93 344.4 255 67.5
Lsat_1_v5_gn_2_93161 Lactuca sativa HOM05D006878 ORTHO05D008579 9.9e-93 344.0 239 69.5
CSS0001354 Camellia sinensis var. sinensis HOM05D006878 ORTHO05D008579 4.9e-92 341.7 226 74.3
Eucgr.I01641 Eucalyptus grandis HOM05D006878 ORTHO05D008579 6.4e-92 341.3 231 73.2
Glyma.16G056000 Glycine max HOM05D006878 ORTHO05D008579 3.2e-91 339.0 255 70.6
Phvul.001G093000 Phaseolus vulgaris HOM05D006878 ORTHO05D008579 4.1e-91 338.6 246 72.0
Peaxi162Scf00420g00554 Petunia axillaris HOM05D006878 ORTHO05D008579 5.4e-91 338.2 256 67.2
PGSC0003DMG400020210 Solanum tuberosum HOM05D006878 ORTHO05D008579 7.1e-91 337.8 254 67.7
RcHm_v2.0_Chr2g0175731 Rosa chinensis HOM05D006878 ORTHO05D008579 9.2e-91 337.4 278 64.0
SGA_v2.0_scaffold47G17597 Striga asiatica HOM05D006878 ORTHO05D008579 1.6e-90 336.7 244 70.5
Aqoxy5G03335 Aquilegia oxysepala HOM05D006878 ORTHO05D008579 2.7e-90 335.9 240 70.4
AUR62003439 Chenopodium quinoa HOM05D006878 ORTHO05D008579 3.5e-90 335.5 256 67.2
AUR62029405 Chenopodium quinoa HOM05D006878 ORTHO05D008579 7.8e-90 334.3 256 66.4
Aa31LG11G14940 Aethionema arabicum HOM05D006878 ORTHO05D008579 1.3e-89 333.6 248 67.7
Migut.K01467 Erythranthe guttata HOM05D006878 ORTHO05D008579 1.3e-89 333.6 252 66.7
Oeu005107.2 Olea europaea HOM05D006878 ORTHO05D008579 1.3e-89 333.6 280 63.2
Solyc02g094170.3 Solanum lycopersicum HOM05D006878 ORTHO05D008579 1.7e-89 333.2 254 67.3
AT5G14140 Arabidopsis thaliana HOM05D006878 ORTHO05D008579 2.3e-89 332.8 255 65.9
Lalb_Chr14g0363461 Lupinus albus HOM05D006878 ORTHO05D008579 2.3e-89 332.8 242 70.2
BcaB01g05305 Brassica carinata HOM05D006878 ORTHO05D008579 3.9e-89 332.0 259 65.6
Sopen02g038800 Solanum pennellii HOM05D006878 ORTHO05D008579 3.9e-89 332.0 254 67.3
MSTRG.3257 Avicennia marina HOM05D006878 ORTHO05D008579 6.6e-89 331.3 232 71.6
Thhalv10014409m.g Eutrema salsugineum HOM05D006878 ORTHO05D008579 6.6e-89 331.3 255 65.9
AL6G24810 Arabidopsis lyrata HOM05D006878 ORTHO05D008579 1.1e-88 330.5 255 65.9
Carub.0006s1234 Capsella rubella HOM05D006878 ORTHO05D008579 1.1e-88 330.5 252 67.1
FAN09G4559 Fragaria x ananassa HOM05D006878 ORTHO05D008579 1.5e-88 330.1 278 62.9
C03p07460 Brassica napus HOM05D006878 ORTHO05D008579 2.5e-88 329.3 250 66.8
BolC3t13247H Brassica oleracea HOM05D006878 ORTHO05D008579 2.5e-88 329.3 250 66.8
Sp6g29870 Schrenkiella parvula HOM05D006878 ORTHO05D008579 3.3e-88 328.9 255 65.5
SpUn0049_0070 Schrenkiella parvula HOM05D006878 ORTHO05D008579 3.3e-88 328.9 255 65.5
arahy.Tifrunner.gnm1.ann1.1N9EHH Arachis hypogaea HOM05D006878 ORTHO05D008579 7.3e-88 327.8 240 68.8
arahy.Tifrunner.gnm1.ann1.G39TQA Arachis hypogaea HOM05D006878 ORTHO05D008579 7.3e-88 327.8 240 69.2
Nn3g16452 Nelumbo nucifera HOM05D006878 ORTHO05D008579 7.3e-88 327.8 233 70.8
FvH4_6g53600 Fragaria vesca HOM05D006878 ORTHO05D008579 9.6e-88 327.4 277 62.5
BcaB01g06341 Brassica carinata HOM05D006878 ORTHO05D008579 1.2e-87 327.0 249 67.5
A03p06460 Brassica napus HOM05D006878 ORTHO05D008579 1.6e-87 326.6 249 66.7
Ah.02g119990 Amaranthus hybridus HOM05D006878 ORTHO05D008579 2.1e-87 326.2 235 68.9
SalBow7G1076 Salvia bowleyana HOM05D006878 ORTHO05D008579 3.6e-87 325.5 256 66.4
Sc03g0006490 Simmondsia chinensis HOM05D006878 ORTHO05D008579 4.7e-87 325.1 239 66.5
FAN14G5463 Fragaria x ananassa HOM05D006878 ORTHO05D008579 2.4e-86 322.8 277 61.7
Lj1g0011001 Lotus japonicus HOM05D006878 ORTHO05D008579 8.9e-86 320.9 240 69.6
ATR0561G206 Amborella trichopoda HOM05D006878 ORTHO05D008579 2.0e-85 319.7 261 62.8
CiPaw.04G036900 Carya illinoinensis HOM05D006878 ORTHO05D008579 3.8e-84 315.5 216 71.8
ECA238G1054 Erigeron canadensis HOM05D006878 ORTHO05D008579 3.8e-84 315.5 270 61.9
MBI07_g39449_MAGBIO Magnolia biondii HOM05D006878 ORTHO05D008579 1.7e-81 306.6 236 66.5
PSO478G0882 Papaver somniferum HOM05D006878 ORTHO05D008579 1.1e-80 303.9 263 60.1
THA.LOC104821122 Tarenaya hassleriana HOM05D006878 ORTHO05D008579 7.3e-80 301.2 237 65.0
SHI03949 Sapria himalayana HOM05D006878 ORTHO05D008579 1.6e-79 300.1 239 60.7
CARHR199200 Cardamine hirsuta HOM05D006878 ORTHO05D008579 2.1e-79 299.7 241 61.8
PSO017G0833 Papaver somniferum HOM05D006878 ORTHO05D008579 4.9e-76 288.5 261 58.6
Zm00001eb112900 Zea mays HOM05D006878 ORTHO05D008579 6.4e-76 288.1 272 54.8
Os11g0498400 Oryza sativa ssp. japonica HOM05D006878 ORTHO05D008579 1.1e-75 287.3 271 55.4
Medtr7g029090 Medicago truncatula HOM05D006878 ORTHO05D008579 5.4e-75 285.0 189 74.6
CDE05G3687 Ceratophyllum demersum HOM05D000160 ORTHO05D000496 1.1e-72 277.3 226 63.7
EL10Ac6g15414 Beta vulgaris HOM05D006878 ORTHO05D008579 3.3e-72 275.8 242 59.9
Lju41C53T12 Lonicera japonica HOM05D006878 ORTHO05D008579 1.8e-70 270.0 240 62.1
Lalb_Chr22g0360351 Lupinus albus HOM05D006878 ORTHO05D008579 6.0e-66 255.0 180 71.1
Pp3c4_16130 Physcomitrium patens HOM05D006878 ORTHO05D008579 1.8e-54 216.9 256 46.9
SMO367G0946 Selaginella moellendorffii HOM05D006878 ORTHO05D008579 5.9e-53 211.8 223 52.0
Haze_14883 Corylus avellana HOM05D006878 ORTHO05D008579 4.6e-50 202.2 259 50.2
Cpa.g.sc171.9 Carica papaya HOM05D006878 ORTHO05D008579 7.9e-50 201.4 129 73.6
Ca_22814_v3 Cicer arietinum L. HOM05D006878 ORTHO05D008579 1.0e-49 201.1 253 50.6
Mapoly0041s0098 Marchantia polymorpha HOM05D006878 ORTHO05D008579 6.7e-49 198.4 268 41.4
Medtr7g029095 Medicago truncatula HOM05D006878 ORTHO05D008579 1.5e-48 197.2 254 46.1
CBR_g26294 Chara braunii HOM05D006878 ORTHO05D008579 2.2e-44 183.3 185 50.8
HPP92_022669 Vanilla planifolia HOM05D006878 ORTHO05D008579 2.1e-42 176.8 119 69.7
SEGI_11908 Sequoiadendron giganteum HOM05D006878 ORTHO05D008579 3.0e-33 146.4 120 57.5
FAN02G3703 Fragaria x ananassa HOM05D006878 ORTHO05D008579 2.0e-32 143.7 151 57.0
BraA03t09977Z Brassica rapa HOM05D006878 ORTHO05D008579 5.7e-32 142.1 131 58.8
Medtr7g029065 Medicago truncatula HOM05D004216 ORTHO05D004926 6.3e-23 112.1 111 58.6
PRCOL_00001512 Prasinoderma coloniale HOM05D006878 ORTHO05D008579 9.4e-19 98.2 140 36.4
CDE05G3052 Ceratophyllum demersum HOM05D006878 ORTHO05D008579 2.1e-18 97.1 112 51.8
FAN23G0458 Fragaria x ananassa HOM05D006878 ORTHO05D008579 5.2e-09 65.9 56 60.7
FAN23G0356 Fragaria x ananassa HOM05D006878 ORTHO05D008579 2.0e-08 63.9 59 50.8
Actinidia36205 Actinidia chinensis HOM05D006878 ORTHO05D008579 7.5e-08 62.0 44 61.4
Pp3c4_16200 Physcomitrium patens HOM05D006878 ORTHO05D008579 1.3e-07 61.2 133 36.1


User provided reference genes

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