Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_2G033090 Cucumis sativus L. HOM05D007440 ORTHO05D009418 9.8e-236 819.7 400 100.0
MELO3C008079.2 Cucumis melo HOM05D007440 ORTHO05D009418 3.2e-226 788.1 398 95.7
ClCG11G008830 Citrullus lanatus HOM05D007440 ORTHO05D009418 2.9e-219 765.0 398 92.2
Sed0012539 Sechium edule HOM05D007440 ORTHO05D009418 1.3e-206 723.0 399 85.7
CiPaw.03G017000 Carya illinoinensis HOM05D007440 ORTHO05D009418 3.9e-184 648.3 396 76.5
QL09p004054 Quercus lobata HOM05D007440 ORTHO05D009418 2.2e-179 632.5 388 76.3
Cfa008111 Carpinus fangiana HOM05D007440 ORTHO05D009418 1.4e-178 629.8 399 73.7
GSVIVG01036437001 Vitis vinifera HOM05D007440 ORTHO05D009418 5.5e-178 627.9 392 76.0
Dinv41796 Davidia involucrata HOM05D007440 ORTHO05D009418 6.1e-177 624.4 395 76.2
Thecc.08G172800 Theobroma cacao HOM05D007440 ORTHO05D009418 8.7e-176 620.5 392 75.3
Manes.18G121350 Manihot esculenta HOM05D007440 ORTHO05D009418 2.5e-175 619.0 391 75.4
TAR381G0685 Trochodendron aralioides HOM05D007440 ORTHO05D009418 7.4e-175 617.5 400 73.0
Atru.chr12.1704 Acer truncatum HOM05D007440 ORTHO05D009418 1.3e-174 616.7 392 76.3
FAN18G0056 Fragaria x ananassa HOM05D007440 ORTHO05D009418 6.9e-173 610.9 396 71.5
Hma1.2p1_0708F.1_g207100 Hydrangea macrophylla HOM05D007440 ORTHO05D009418 3.4e-172 608.6 390 74.6
Nn1g02997 Nelumbo nucifera HOM05D007440 ORTHO05D009418 8.5e-171 604.0 391 73.9
RcHm_v2.0_Chr7g0224381 Rosa chinensis HOM05D007440 ORTHO05D009418 2.5e-170 602.4 390 73.1
Potri.019G076200 Populus trichocarpa HOM05D007440 ORTHO05D009418 1.2e-169 600.1 394 73.6
CSS0017361 Camellia sinensis var. sinensis HOM05D007440 ORTHO05D009418 3.6e-169 598.6 393 72.8
TWI23G1187 Tripterygium wilfordii HOM05D007440 ORTHO05D009418 4.6e-169 598.2 395 73.4
Cpa.g.sc21.56 Carica papaya HOM05D007440 ORTHO05D009418 1.0e-168 597.0 392 72.7
PGR031G3126 Punica granatum HOM05D007440 ORTHO05D009418 1.8e-168 596.3 392 73.2
Haze_13927 Corylus avellana HOM05D007440 ORTHO05D009418 6.7e-168 594.3 396 71.5
CANSAT25G0816 Cannabis sativa HOM05D007440 ORTHO05D009418 4.3e-167 591.7 386 72.0
Lj9C701T14 Lonicera japonica HOM05D007440 ORTHO05D009418 4.3e-167 591.7 381 75.1
Actinidia29398 Actinidia chinensis HOM05D007440 ORTHO05D009418 7.4e-167 590.9 390 72.6
Gorai.009G265700 Gossypium raimondii HOM05D007440 ORTHO05D009418 5.3e-165 584.7 387 73.1
Gohir.D05G254100 Gossypium hirsutum HOM05D007440 ORTHO05D009418 9.1e-165 583.9 387 72.9
MD15G1399400 Malus domestica HOM05D007440 ORTHO05D009418 5.9e-164 581.3 399 68.7
Gohir.A05G252301 Gossypium hirsutum HOM05D007440 ORTHO05D009418 6.5e-163 577.8 387 71.6
Oeu061891.1 Olea europaea HOM05D007440 ORTHO05D009418 6.5e-163 577.8 403 69.0
Sabra19G0086600 Salix brachista HOM05D007440 ORTHO05D009418 1.1e-162 577.0 402 71.1
Cc03_g16220 Coffea canephora HOM05D007440 ORTHO05D009418 7.2e-162 574.3 398 69.3
Lj3g0019924 Lotus japonicus HOM05D007440 ORTHO05D009418 7.2e-162 574.3 394 71.1
Solyc12g017690.3 Solanum lycopersicum HOM05D007440 ORTHO05D009418 3.9e-160 568.5 393 71.0
Glyma.13G000800 Glycine max HOM05D007440 ORTHO05D009418 5.1e-160 568.2 391 70.8
Lsat_1_v5_gn_1_25281 Lactuca sativa HOM05D007440 ORTHO05D009418 2.6e-159 565.8 403 69.2
Rhsim02G0174300 Rhododendron simsii HOM05D007440 ORTHO05D009418 5.7e-159 564.7 401 69.6
arahy.Tifrunner.gnm1.ann1.E07HZ8 Arachis hypogaea HOM05D007440 ORTHO05D009418 7.4e-159 564.3 393 70.2
arahy.Tifrunner.gnm1.ann1.YQ4984 Arachis hypogaea HOM05D007440 ORTHO05D009418 9.7e-159 563.9 393 70.2
Sopen12g008470 Solanum pennellii HOM05D007440 ORTHO05D009418 1.3e-158 563.5 393 69.7
PSO170G3813 Papaver somniferum HOM05D007440 ORTHO05D009418 4.8e-158 561.6 396 67.4
Phvul.011G216600 Phaseolus vulgaris HOM05D007440 ORTHO05D009418 8.2e-158 560.8 389 70.4
Ciclev10024582m.g Citrus clementina HOM05D007440 ORTHO05D009418 2.4e-157 559.3 390 71.3
FvH4_5g32910 Fragaria vesca HOM05D007440 ORTHO05D009418 5.3e-157 558.1 359 71.9
Aqoxy6G00075 Aquilegia oxysepala HOM05D007440 ORTHO05D009418 2.6e-156 555.8 415 66.0
Migut.N03008 Erythranthe guttata HOM05D007440 ORTHO05D009418 1.3e-155 553.5 393 67.2
Prupe.1G546900 Prunus persica HOM05D007440 ORTHO05D009418 1.5e-154 550.1 353 73.1
Psat7g227720 Pisum sativum HOM05D007440 ORTHO05D009418 1.0e-152 543.9 384 68.5
TPR.G34135 Trifolium pratense HOM05D007440 ORTHO05D009418 1.0e-152 543.9 384 68.2
SalBow6G1672 Salvia bowleyana HOM05D007440 ORTHO05D009418 3.0e-152 542.3 402 65.7
Hund26630 Selenicereus undatus HOM05D007440 ORTHO05D009418 2.0e-151 539.7 389 67.9
Medtr4g031180 Medicago truncatula HOM05D007440 ORTHO05D009418 1.7e-150 536.6 385 67.5
HanXRQChr02g0037061 Helianthus annuus HOM05D007440 ORTHO05D009418 2.2e-150 536.2 395 68.1
CDE05G2917 Ceratophyllum demersum HOM05D007440 ORTHO05D009418 6.3e-150 534.6 392 65.8
FAN04G2515 Fragaria x ananassa HOM05D007440 ORTHO05D009418 1.8e-149 533.1 390 66.7
ATR1089G110 Amborella trichopoda HOM05D007440 ORTHO05D009418 1.4e-144 516.9 392 65.1
HPP92_004660 Vanilla planifolia HOM05D007440 ORTHO05D009418 4.4e-143 511.9 398 63.8
SGA_v2.0_scaffold19G08914 Striga asiatica HOM05D007440 ORTHO05D009418 1.0e-139 500.7 491 55.2
Os10g0141900 Oryza sativa ssp. japonica HOM05D007440 ORTHO05D009418 1.7e-139 500.0 393 61.8
THA.LOC104810378 Tarenaya hassleriana HOM05D007440 ORTHO05D009418 3.8e-139 498.8 386 61.4
Aa31LG4G9050 Aethionema arabicum HOM05D007440 ORTHO05D009418 1.1e-138 497.3 385 63.1
RcHm_v2.0_Chr7g0230881 Rosa chinensis HOM05D007440 ORTHO05D009418 1.5e-138 496.9 323 70.9
Lalb_Chr17g0336871 Lupinus albus HOM05D007440 ORTHO05D009418 2.5e-138 496.1 396 64.4
Ca_12759_v3 Cicer arietinum L. HOM05D007440 ORTHO05D009418 1.7e-134 483.4 388 61.3
ECA247G2087 Erigeron canadensis HOM05D007440 ORTHO05D009418 3.8e-131 472.2 323 68.4
Eucgr.H00023 Eucalyptus grandis HOM05D007440 ORTHO05D009418 2.1e-129 466.5 308 69.8
MBI03_g14514_MAGBIO Magnolia biondii HOM05D007440 ORTHO05D009418 2.3e-123 446.4 341 65.4
FAN08G1847 Fragaria x ananassa HOM05D007440 ORTHO05D009418 1.4e-120 437.2 342 60.8
DCAR_002184 Daucus carota HOM05D007440 ORTHO05D004363 1.1e-109 401.0 330 60.0
Pp3c17_10270 Physcomitrium patens HOM05D007440 ORTHO05D009418 7.8e-108 394.8 395 50.1
Duzib177G0102 Durio zibethinus HOM05D007440 ORTHO05D009418 3.3e-106 389.4 233 78.5
Zm00001eb026400 Zea mays HOM05D007440 ORTHO05D009418 2.1e-105 386.7 306 61.4
Mapoly0046s0064 Marchantia polymorpha HOM05D007440 ORTHO05D009418 4.7e-105 385.6 395 49.1
SMO347G0497 Selaginella moellendorffii HOM05D007440 ORTHO05D009418 5.2e-104 382.1 374 50.3
Nitab4.5_0006566g0010 Nicotiana tabacum HOM05D007440 ORTHO05D009418 9.2e-101 371.3 327 58.1
PSO782G5381 Papaver somniferum HOM05D007440 ORTHO05D009418 2.5e-98 363.2 250 69.2
Pp3c9_24070 Physcomitrium patens HOM05D007440 ORTHO05D009418 4.2e-93 345.9 409 44.7
CBR_g29696 Chara braunii HOM05D007440 ORTHO05D009418 3.3e-82 309.7 471 38.9
Nitab4.5_0000219g0060 Nicotiana tabacum HOM05D007440 ORTHO05D009418 9.6e-82 308.1 214 70.1
Lsat_1_v5_gn_7_9441 Lactuca sativa HOM05D007440 ORTHO05D009418 2.4e-80 303.5 267 57.7
COL.COLO4_24615 Corchorus olitorius HOM05D007440 ORTHO05D009418 6.7e-75 285.4 181 74.6
Peaxi162Scf00017g00002 Petunia axillaris HOM05D007440 ORTHO05D009418 1.1e-74 284.6 270 54.4
AagrBONN_evm.TU.Sc2ySwM_362.1381 Anthoceros agrestis HOM05D007440 ORTHO05D009418 1.6e-73 280.8 277 47.7
CSS0010463 Camellia sinensis var. sinensis HOM05D007440 ORTHO05D009418 8.1e-73 278.5 181 72.9
PGSC0003DMG401002240 Solanum tuberosum HOM05D007440 ORTHO05D009418 3.8e-70 269.6 178 71.3
vmacro11039 Vaccinium macrocarpon HOM05D007440 ORTHO05D009418 2.1e-68 263.8 222 61.3
Nitab4.5_0000219g0040 Nicotiana tabacum HOM05D007440 ORTHO05D009418 3.3e-66 256.5 180 67.8
Atru.chr13.2417 Acer truncatum HOM05D007440 ORTHO05D009418 3.1e-64 250.0 161 75.8
PGSC0003DMG402002240 Solanum tuberosum HOM05D007440 ORTHO05D009418 1.7e-62 244.2 171 70.8
vmacro11038 Vaccinium macrocarpon HOM05D007440 ORTHO05D009418 7.2e-61 238.8 211 59.2
PRCOL_00006364 Prasinoderma coloniale HOM05D007440 ORTHO05D009418 8.2e-57 225.3 383 34.5
Cre10.g451000 Chlamydomonas reinhardtii HOM05D007440 ORTHO05D009418 2.9e-54 216.9 457 33.7
MCO13G519 Micromonas commoda HOM05D007440 ORTHO05D009418 6.7e-51 205.7 415 32.3
CSS0018984 Camellia sinensis var. sinensis HOM05D007440 ORTHO05D009418 1.1e-50 204.9 174 60.9
CAN.G8.41 Capsicum annuum HOM05D007440 ORTHO05D009418 5.7e-50 202.6 210 50.0
CAN.G8.40 Capsicum annuum HOM05D007440 ORTHO05D009418 3.6e-36 156.8 111 64.0
Thecc.09G136000 Theobroma cacao HOM05D007440 ORTHO05D009418 2.6e-34 150.6 96 78.1
MD08G1188600 Malus domestica HOM05D006997 ORTHO05D008713 2.9e-30 137.1 375 27.2
Gorai.002G141200 Gossypium raimondii HOM05D006997 ORTHO05D008713 5.0e-30 136.3 329 30.4
Actinidia30795 Actinidia chinensis HOM05D006997 ORTHO05D008713 8.5e-30 135.6 386 28.0
Gohir.A01G132700 Gossypium hirsutum HOM05D006997 ORTHO05D008713 1.1e-29 135.2 329 28.9
FvH4_5g36560 Fragaria vesca HOM05D006997 ORTHO05D008713 1.5e-29 134.8 395 28.6
Actinidia10345 Actinidia chinensis HOM05D006997 ORTHO05D008713 1.9e-29 134.4 328 29.9
Manes.02G149000 Manihot esculenta HOM05D006997 ORTHO05D008713 1.9e-29 134.4 329 29.2
Prupe.1G523100 Prunus persica HOM05D006997 ORTHO05D008713 1.9e-29 134.4 328 29.3
Thecc.08G101800 Theobroma cacao HOM05D006997 ORTHO05D008713 1.9e-29 134.4 329 30.4
Eucgr.F00379 Eucalyptus grandis HOM05D006997 ORTHO05D008713 2.5e-29 134.0 370 28.6
Mapoly0028s0040 Marchantia polymorpha HOM05D006997 ORTHO05D008713 3.2e-29 133.7 364 26.1
Duzib093G0368 Durio zibethinus HOM05D006997 ORTHO05D008713 4.2e-29 133.3 329 29.8
Duzib116G0677 Durio zibethinus HOM05D006997 ORTHO05D008713 4.2e-29 133.3 329 29.5
FAN13G2131 Fragaria x ananassa HOM05D006997 ORTHO05D008713 4.2e-29 133.3 400 27.8
Ciclev10001423m.g Citrus clementina HOM05D006997 ORTHO05D008713 5.5e-29 132.9 329 30.1
CsaV3_3G047700 Cucumis sativus L. HOM05D006997 ORTHO05D008713 5.5e-29 132.9 337 28.8
PSO170G4713 Papaver somniferum HOM05D006997 ORTHO05D008713 5.5e-29 132.9 396 28.5
arahy.Tifrunner.gnm1.ann1.50RG73 Arachis hypogaea HOM05D006997 ORTHO05D008713 9.4e-29 132.1 323 28.5
CANSAT54G2489 Cannabis sativa HOM05D006997 ORTHO05D008713 9.4e-29 132.1 328 29.3
MELO3C003553.2 Cucumis melo HOM05D006997 ORTHO05D008713 9.4e-29 132.1 327 29.4
Atru.chr13.1117 Acer truncatum HOM05D006997 ORTHO05D008713 1.2e-28 131.7 370 28.9
Lalb_Chr08g0242211 Lupinus albus HOM05D006997 ORTHO05D008713 1.2e-28 131.7 397 28.0
RcHm_v2.0_Chr3g0492071 Rosa chinensis HOM05D006997 ORTHO05D008713 1.2e-28 131.7 328 29.3
Migut.O00787 Erythranthe guttata HOM05D006997 ORTHO05D008713 1.6e-28 131.3 370 27.6
FAN18G0565 Fragaria x ananassa HOM05D006997 ORTHO05D008713 1.6e-28 131.3 392 28.6
PSO700G0253 Papaver somniferum HOM05D006997 ORTHO05D008713 1.6e-28 131.3 337 28.8
Potri.002G100700 Populus trichocarpa HOM05D006997 ORTHO05D008713 1.6e-28 131.3 375 27.5
TAR381G0945 Trochodendron aralioides HOM05D006997 ORTHO05D008713 1.6e-28 131.3 329 29.8
TWI56G0051 Tripterygium wilfordii HOM05D006997 ORTHO05D008713 2.1e-28 131.0 395 27.3
arahy.Tifrunner.gnm1.ann1.2V06JV Arachis hypogaea HOM05D006997 ORTHO05D008713 2.7e-28 130.6 323 28.2
Pp3c2_7910 Physcomitrium patens HOM05D006997 ORTHO05D008713 2.7e-28 130.6 395 26.8
VMungo1309G1562 Vigna mungo HOM05D006997 ORTHO05D008713 2.7e-28 130.6 385 27.3
FAN08G2563 Fragaria x ananassa HOM05D006997 ORTHO05D008713 3.6e-28 130.2 322 29.5
Nn5g29994 Nelumbo nucifera HOM05D006997 ORTHO05D008713 3.6e-28 130.2 329 28.6
MBI02_g10710_MAGBIO Magnolia biondii HOM05D006997 ORTHO05D008713 4.7e-28 129.8 330 28.8
PGR042G3947 Punica granatum HOM05D006997 ORTHO05D008713 4.7e-28 129.8 329 28.3
Glyma.04G099000 Glycine max HOM05D006997 ORTHO05D008713 6.1e-28 129.4 375 26.9
Cc10_g06680 Coffea canephora HOM05D006997 ORTHO05D008713 1.0e-27 128.6 328 28.7
Lj1g0014637 Lotus japonicus HOM05D006997 ORTHO05D008713 1.0e-27 128.6 375 26.9
TPR.G18644 Trifolium pratense HOM05D006997 ORTHO05D008713 1.0e-27 128.6 368 27.2
CiPaw.15G045900 Carya illinoinensis HOM05D006997 ORTHO05D008713 1.4e-27 128.3 322 29.2
CSS0033006 Camellia sinensis var. sinensis HOM05D006997 ORTHO05D008713 1.8e-27 127.9 329 29.5
Haze_18264 Corylus avellana HOM05D006997 ORTHO05D008713 2.3e-27 127.5 322 28.9
HPP92_005985 Vanilla planifolia HOM05D006997 ORTHO05D008713 2.3e-27 127.5 378 26.7
Glyma.06G100700 Glycine max HOM05D006997 ORTHO05D008713 3.0e-27 127.1 375 26.7
PSO447G0258 Papaver somniferum HOM05D006997 ORTHO05D008713 4.0e-27 126.7 396 27.8
QL02p002364 Quercus lobata HOM05D006997 ORTHO05D008713 4.0e-27 126.7 327 28.4
Cpa.g.sc36.182 Carica papaya HOM05D006997 ORTHO05D008713 8.8e-27 125.6 289 29.4
Medtr5g099370 Medicago truncatula HOM05D006997 ORTHO05D008713 1.2e-26 125.2 375 26.9
Cre12.g558400 Chlamydomonas reinhardtii HOM05D006997 ORTHO05D008713 1.5e-26 124.8 391 26.1
Hma1.2p1_1613F.1_g293656 Hydrangea macrophylla HOM05D006997 ORTHO05D008713 2.0e-26 124.4 322 28.3
GSVIVG01009084001 Vitis vinifera HOM05D006997 ORTHO05D008713 2.0e-26 124.4 329 28.0
Nitab4.5_0005108g0030 Nicotiana tabacum HOM05D006997 ORTHO05D008713 2.6e-26 124.0 334 28.1
Migut.N02878 Erythranthe guttata HOM05D006997 ORTHO05D008713 9.8e-26 122.1 345 27.8
ATR0684G208 Amborella trichopoda HOM05D006997 ORTHO05D008713 1.3e-25 121.7 330 28.8
Psat2g000280 Pisum sativum HOM05D006997 ORTHO05D008713 1.7e-25 121.3 282 29.8
CSS0036565 Camellia sinensis var. sinensis HOM05D006997 ORTHO05D008713 2.2e-25 120.9 289 30.1
SalBow1G8133 Salvia bowleyana HOM05D006997 ORTHO05D008713 4.8e-25 119.8 363 25.1
SMO203G0247 Selaginella moellendorffii HOM05D006997 ORTHO05D008713 4.8e-25 119.8 322 26.4
Lj4C96G9 Lonicera japonica HOM05D006997 ORTHO05D008713 6.3e-25 119.4 306 28.4
THA.LOC104806793 Tarenaya hassleriana HOM05D006997 ORTHO05D008713 6.3e-25 119.4 363 25.6
Hund26989 Selenicereus undatus HOM05D006997 ORTHO05D008713 1.8e-24 117.9 263 28.9
Gohir.D01G115600 Gossypium hirsutum HOM05D006997 ORTHO05D008713 2.4e-24 117.5 243 31.7
COL.COLO4_12006 Corchorus olitorius HOM05D006997 ORTHO05D008713 5.4e-24 116.3 243 31.7
ClCG11G014320 Citrullus lanatus HOM05D006997 ORTHO05D008713 1.6e-23 114.8 373 26.8
Thecc.02G308000 Theobroma cacao HOM05D007440 ORTHO05D009418 1.6e-23 114.8 76 75.0
Rhsim06G0078000 Rhododendron simsii HOM05D006997 ORTHO05D008713 2.7e-23 114.0 371 25.9
vmacro21291 Vaccinium macrocarpon HOM05D006997 ORTHO05D008713 3.5e-23 113.6 256 28.9
AagrBONN_evm.TU.Sc2ySwM_228.3329 Anthoceros agrestis HOM05D006997 ORTHO05D008713 4.5e-23 113.2 261 28.4
arahy.Tifrunner.gnm1.ann1.M6BDRX Arachis hypogaea HOM05D006997 ORTHO05D008713 1.0e-22 112.1 333 26.7
Glyma.08G367700 Glycine max HOM05D007440 ORTHO05D009418 1.7e-22 111.3 73 69.9
Atru.chr13.2418 Acer truncatum HOM05D007440 ORTHO05D009418 9.5e-21 105.5 165 42.4
Ca_20316_v3 Cicer arietinum L. HOM05D006997 ORTHO05D008713 3.6e-20 103.6 318 26.7
Aqoxy5G01920 Aquilegia oxysepala HOM05D006997 ORTHO05D008713 4.7e-20 103.2 340 26.2
arahy.Tifrunner.gnm1.ann1.I3UG1J Arachis hypogaea HOM05D006997 ORTHO05D008713 6.1e-20 102.8 314 25.8
SEGI_15929 Sequoiadendron giganteum HOM05D007440 ORTHO05D009418 1.0e-19 102.1 70 64.3
DCAR_012882 Daucus carota HOM05D006997 ORTHO05D008713 5.2e-19 99.8 261 26.8
ECA247G2990 Erigeron canadensis HOM05D007440 ORTHO05D009418 1.5e-18 98.2 103 49.5
Dinv07073 Davidia involucrata HOM05D006997 ORTHO05D008713 1.4e-16 91.7 199 31.2
SGA_v2.0_scaffold28G11904 Striga asiatica HOM05D006997 ORTHO05D008713 1.6e-15 88.2 195 28.7
MD15G1376400 Malus domestica HOM05D006997 ORTHO05D008713 2.3e-14 84.3 203 28.6
CBR_g19661 Chara braunii HOM05D006997 ORTHO05D008713 4.7e-12 76.6 274 24.5


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