Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_2G032160 Cucumis sativus L. HOM05D007100 ORTHO05D008958 1.1e-95 353.6 217 100.0
MELO3C011269.2 Cucumis melo HOM05D007100 ORTHO05D008958 1.1e-87 327.0 217 94.0
ClCG08G013430 Citrullus lanatus HOM05D007100 ORTHO05D008958 1.5e-84 316.6 217 91.7
Sed0021254 Sechium edule HOM05D007100 ORTHO05D008958 2.8e-67 259.2 220 79.5
Sabra18G0029100 Salix brachista HOM05D007100 ORTHO05D008958 8.9e-58 227.6 221 67.4
Manes.03G013900 Manihot esculenta HOM05D007100 ORTHO05D008958 7.6e-57 224.6 216 72.7
Potri.006G255600 Populus trichocarpa HOM05D007100 ORTHO05D008958 1.7e-56 223.4 222 68.0
Potri.018G026500 Populus trichocarpa HOM05D007100 ORTHO05D008958 2.9e-56 222.6 221 68.3
Thecc.09G023500 Theobroma cacao HOM05D007100 ORTHO05D008958 3.8e-56 222.2 224 67.0
Manes.16G122700 Manihot esculenta HOM05D007100 ORTHO05D008958 1.1e-55 220.7 221 71.9
Duzib168G1945 Durio zibethinus HOM05D007100 ORTHO05D008958 2.1e-54 216.5 220 66.4
CANSAT25G0532 Cannabis sativa HOM05D007100 ORTHO05D008958 1.3e-53 213.8 221 68.8
Cpa.g.sc217.8 Carica papaya HOM05D007100 ORTHO05D008958 3.0e-53 212.6 221 67.0
COL.COLO4_18868 Corchorus olitorius HOM05D007100 ORTHO05D008958 5.1e-53 211.8 225 65.8
Prupe.1G482000 Prunus persica HOM05D007100 ORTHO05D008958 1.5e-52 210.3 222 67.6
MD15G1126100 Malus domestica HOM05D007100 ORTHO05D008958 1.6e-51 206.8 222 65.3
TWI32G1182 Tripterygium wilfordii HOM05D007100 ORTHO05D008958 2.8e-51 206.1 218 67.4
Lalb_Chr08g0244131 Lupinus albus HOM05D007100 ORTHO05D008958 4.8e-51 205.3 224 66.1
Atru.chr7.2441 Acer truncatum HOM05D007100 ORTHO05D008958 8.1e-51 204.5 226 65.9
Solyc06g066000.3 Solanum lycopersicum HOM05D007100 ORTHO05D008958 2.6e-49 199.5 226 62.4
Sopen06g024470 Solanum pennellii HOM05D007100 ORTHO05D008958 2.6e-49 199.5 225 64.0
Sopen06g024480 Solanum pennellii HOM05D007100 ORTHO05D008958 2.6e-49 199.5 226 62.4
PGSC0003DMG400020484 Solanum tuberosum HOM05D007100 ORTHO05D008958 2.6e-49 199.5 226 62.4
VMungo1309G2169 Vigna mungo HOM05D007100 ORTHO05D008958 2.6e-49 199.5 223 65.5
RcHm_v2.0_Chr6g0297791 Rosa chinensis HOM05D007100 ORTHO05D008958 7.6e-49 198.0 221 66.5
FAN20G2791 Fragaria x ananassa HOM05D007100 ORTHO05D008958 1.7e-48 196.8 220 65.0
PGSC0003DMG400020466 Solanum tuberosum HOM05D007100 ORTHO05D008958 2.2e-48 196.4 225 60.9
CARHR240140 Cardamine hirsuta HOM05D007100 ORTHO05D008958 2.9e-48 196.1 223 64.6
CiPaw.03G162500 Carya illinoinensis HOM05D007100 ORTHO05D008958 3.8e-48 195.7 218 65.6
FvH4_2g28951 Fragaria vesca HOM05D007100 ORTHO05D008958 1.1e-47 194.1 222 64.4
PGR044G2669 Punica granatum HOM05D007100 ORTHO05D008958 1.1e-47 194.1 219 66.2
CAN.G1230.3 Capsicum annuum HOM05D007100 ORTHO05D008958 4.2e-47 192.2 226 60.2
Oeu057296.2 Olea europaea HOM05D007100 ORTHO05D008958 4.2e-47 192.2 221 65.6
Ciclev10009435m.g Citrus clementina HOM05D007100 ORTHO05D008958 5.4e-47 191.8 218 57.3
BolC1t00671H Brassica oleracea HOM05D007100 ORTHO05D008958 7.1e-47 191.4 221 61.1
BcaC09g52005 Brassica carinata HOM05D007100 ORTHO05D008958 2.1e-46 189.9 225 60.0
Ah.16g104500 Amaranthus hybridus HOM05D007100 ORTHO05D008958 2.7e-46 189.5 221 62.4
AUR62031529 Chenopodium quinoa HOM05D007100 ORTHO05D008958 3.5e-46 189.1 220 64.5
BraA01t00579Z Brassica rapa HOM05D007100 ORTHO05D008958 6.0e-46 188.3 226 57.1
TPR.G3111 Trifolium pratense HOM05D007100 ORTHO05D008958 6.0e-46 188.3 217 64.1
Cc08_g00530 Coffea canephora HOM05D007100 ORTHO05D008958 7.9e-46 188.0 219 63.0
Lj1g0026662 Lotus japonicus HOM05D007100 ORTHO05D008958 1.0e-45 187.6 220 64.1
PSO210G6161 Papaver somniferum HOM05D007100 ORTHO05D008958 1.8e-45 186.8 224 58.9
AL7G19610 Arabidopsis lyrata HOM05D007100 ORTHO05D008958 8.7e-45 184.5 225 60.4
QL02p021503 Quercus lobata HOM05D007100 ORTHO05D008958 8.7e-45 184.5 220 62.3
Solyc06g065990.1 Solanum lycopersicum HOM05D007100 ORTHO05D008958 1.5e-44 183.7 220 62.3
Carub.0007s0834 Capsella rubella HOM05D007100 ORTHO05D008958 1.9e-44 183.3 221 60.6
Nitab4.5_0003634g0020 Nicotiana tabacum HOM05D007100 ORTHO05D008958 1.9e-44 183.3 214 62.6
AT4G32260 Arabidopsis thaliana HOM05D007100 ORTHO05D008958 3.3e-44 182.6 225 60.4
PSO210G2345 Papaver somniferum HOM05D007100 ORTHO05D008958 3.3e-44 182.6 225 59.1
Nitab4.5_0000109g0380 Nicotiana tabacum HOM05D007100 ORTHO05D008958 4.3e-44 182.2 156 74.4
Aa31LG2G17720 Aethionema arabicum HOM05D007100 ORTHO05D008958 7.4e-44 181.4 222 61.7
Ah.10g035800 Amaranthus hybridus HOM05D007100 ORTHO05D008958 7.4e-44 181.4 221 60.6
Thhalv10026214m.g Eutrema salsugineum HOM05D007100 ORTHO05D008958 9.6e-44 181.0 222 61.7
Migut.A00035 Erythranthe guttata HOM05D007100 ORTHO05D008958 1.3e-43 180.6 212 57.5
CSS0028708 Camellia sinensis var. sinensis HOM05D007100 ORTHO05D008958 1.6e-43 180.3 221 60.2
CSS0035808 Camellia sinensis var. sinensis HOM05D007100 ORTHO05D008958 1.6e-43 180.3 222 62.6
Ca_15742_v3 Cicer arietinum L. HOM05D007100 ORTHO05D008958 2.1e-43 179.9 166 74.7
Duzib150G1121 Durio zibethinus HOM05D007100 ORTHO05D008958 2.8e-43 179.5 223 61.9
Hma1.2p1_0243F.1_g100880 Hydrangea macrophylla HOM05D007100 ORTHO05D008958 2.8e-43 179.5 218 61.5
TAR625G1529 Trochodendron aralioides HOM05D007100 ORTHO05D008958 6.2e-43 178.3 221 58.8
Sp7g29990 Schrenkiella parvula HOM05D007100 ORTHO05D008958 1.1e-42 177.6 222 60.4
SGA_v2.0_scaffold20G09112 Striga asiatica HOM05D007100 ORTHO05D008958 1.4e-42 177.2 219 58.4
Medtr3g106820 Medicago truncatula HOM05D007100 ORTHO05D008958 1.8e-42 176.8 219 62.6
ATR0800G074 Amborella trichopoda HOM05D007100 ORTHO05D008958 2.4e-42 176.4 145 67.6
unitig_32.g11115 Utricularia gibba HOM05D007100 ORTHO05D008958 3.1e-42 176.0 217 60.8
CDE02G1895 Ceratophyllum demersum HOM05D007100 ORTHO05D008958 6.9e-42 174.9 218 61.5
Phvul.009G092366 Phaseolus vulgaris HOM05D007100 ORTHO05D008958 9.0e-42 174.5 224 59.4
Aqoxy7G03649 Aquilegia oxysepala HOM05D007100 ORTHO05D008958 2.0e-41 173.3 218 59.2
AUR62012407 Chenopodium quinoa HOM05D007100 ORTHO05D008958 7.6e-41 171.4 150 73.3
Glyma.04G066000 Glycine max HOM05D007100 ORTHO05D008958 1.7e-40 170.2 215 56.3
CDE08G0375 Ceratophyllum demersum HOM05D007100 ORTHO05D008958 2.9e-40 169.5 219 57.5
Lsat_1_v5_gn_6_21280 Lactuca sativa HOM05D007100 ORTHO05D008958 3.8e-40 169.1 218 56.4
Cfa013136 Carpinus fangiana HOM05D007100 ORTHO05D008958 6.4e-40 168.3 218 61.0
BcaNung03145 Brassica carinata HOM05D002526 ORTHO05D004039 2.1e-38 163.3 221 57.5
Glyma.06G067400 Glycine max HOM05D007100 ORTHO05D008958 2.1e-38 163.3 215 58.1
HanXRQChr13g0403031 Helianthus annuus HOM05D007100 ORTHO05D008958 2.1e-38 163.3 218 59.6
C01p06770 Brassica napus HOM05D002526 ORTHO05D004039 4.6e-38 162.2 168 61.3
Eucgr.C02765 Eucalyptus grandis HOM05D007100 ORTHO05D008958 5.1e-37 158.7 229 55.5
MBI18_g07570_MAGBIO Magnolia biondii HOM05D007100 ORTHO05D008958 5.1e-37 158.7 204 60.8
A01p06140 Brassica napus HOM05D002526 ORTHO05D004039 8.7e-37 157.9 173 59.0
Rhsim02G0202100 Rhododendron simsii HOM05D007100 ORTHO05D008958 1.6e-35 153.7 218 56.9
Nn2g12100 Nelumbo nucifera HOM05D007100 ORTHO05D008958 4.8e-35 152.1 160 66.9
EL10Ac2g04205 Beta vulgaris HOM05D007100 ORTHO05D008958 1.8e-34 150.2 180 58.3
Dinv08635 Davidia involucrata HOM05D007100 ORTHO05D008958 2.4e-34 149.8 128 72.7
ECA233G2559 Erigeron canadensis HOM05D007100 ORTHO05D008958 1.1e-31 141.0 223 54.7
Sc09g0008150 Simmondsia chinensis HOM05D007100 ORTHO05D008958 4.6e-30 135.6 158 62.7
Nitab4.5_0011986g0010 Nicotiana tabacum HOM05D007100 ORTHO05D008958 3.9e-29 132.5 126 72.2
Gohir.D07G032851 Gossypium hirsutum HOM05D007100 ORTHO05D008958 1.3e-27 127.5 107 78.5
Lj7A724T61 Lonicera japonica HOM05D007100 ORTHO05D008958 2.1e-27 126.7 218 51.4
Os03g0278900 Oryza sativa ssp. japonica HOM05D007100 ORTHO05D008958 1.1e-26 124.4 166 57.2
AagrBONN_evm.TU.Sc2ySwM_117.789 Anthoceros agrestis HOM05D007100 ORTHO05D008958 1.8e-26 123.6 157 56.1
Zm00001eb397520 Zea mays HOM05D007100 ORTHO05D008958 5.3e-26 122.1 149 60.4
HPP92_017087 Vanilla planifolia HOM05D007100 ORTHO05D008958 2.6e-25 119.8 158 55.7
Sabra06G0199900 Salix brachista HOM05D007100 ORTHO05D008958 5.5e-23 112.1 106 71.7
SEGI_36293 Sequoiadendron giganteum HOM05D007100 ORTHO05D008958 9.3e-23 111.3 165 53.3
Cre11.g481450 Chlamydomonas reinhardtii HOM05D007100 ORTHO05D008958 2.1e-22 110.2 177 37.9
Gohir.A07G028825 Gossypium hirsutum HOM05D007100 ORTHO05D008958 4.6e-22 109.0 107 71.0
CiPaw.05G145000 Carya illinoinensis HOM05D007100 ORTHO05D008958 6.1e-22 108.6 76 76.3
Nitab4.5_0002042g0090 Nicotiana tabacum HOM05D007100 ORTHO05D008958 3.9e-21 105.9 106 72.6
SMO347G0047 Selaginella moellendorffii HOM05D007100 ORTHO05D008958 8.7e-21 104.8 88 61.4
Pp3c5_7810 Physcomitrium patens HOM05D007100 ORTHO05D008958 4.8e-19 99.0 172 47.1
Pp3c16_15270 Physcomitrium patens HOM05D007100 ORTHO05D008958 2.4e-18 96.7 172 46.5
Pp3c6_23221 Physcomitrium patens HOM05D007100 ORTHO05D008958 2.4e-18 96.7 172 46.5
HPP92_017015 Vanilla planifolia HOM05D007100 ORTHO05D008958 3.1e-18 96.3 145 41.4
Mapoly0061s0013 Marchantia polymorpha HOM05D007100 ORTHO05D008958 2.9e-16 89.7 171 44.4
CBR_g39245 Chara braunii HOM05D007100 ORTHO05D008958 9.4e-15 84.7 93 53.8
PRCOL_00004936 Prasinoderma coloniale HOM05D007100 ORTHO05D008958 4.6e-14 82.4 141 44.7
Psat2g007880 Pisum sativum HOM05D007100 ORTHO05D008958 1.5e-12 77.4 81 55.6
RcHm_v2.0_Chr4g0429151 Rosa chinensis HOM05D007100 ORTHO05D008958 2.0e-12 77.0 89 49.4
MCO01G691 Micromonas commoda HOM05D007100 ORTHO05D008958 2.2e-08 63.5 116 41.4
ATR0829G181 Amborella trichopoda HOM05D007100 ORTHO05D008958 4.7e-06 55.8 139 36.0
AUR62039691 Chenopodium quinoa HOM05D026575 ORTHO05D028765 6.1e-06 55.5 59 57.6
ATR0743G144 Amborella trichopoda HOM05D007100 ORTHO05D008958 7.9e-06 55.1 95 42.1


User provided reference genes

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