Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_2G027920 Cucumis sativus L. HOM05D000955 ORTHO05D001429 1.0e-48 196.4 100 100.0
CsaV3_2G027860 Cucumis sativus L. HOM05D000955 ORTHO05D001429 2.3e-32 142.1 87 81.6
MELO3C010866.2 Cucumis melo HOM05D000955 ORTHO05D001429 3.3e-31 138.3 88 80.7
ClCG08G015880 Citrullus lanatus HOM05D000955 ORTHO05D001429 4.8e-30 134.4 97 75.3
CsaV3_2G027930 Cucumis sativus L. HOM05D000955 ORTHO05D001429 1.3e-16 89.7 82 54.9
CsaV3_2G027880 Cucumis sativus L. HOM05D000955 ORTHO05D001429 3.0e-16 88.6 84 46.4
Sed0015785 Sechium edule HOM05D000955 ORTHO05D001429 3.0e-16 88.6 84 46.4
Sed0024187 Sechium edule HOM05D000955 ORTHO05D001429 3.0e-16 88.6 92 47.8
MELO3C010869.2 Cucumis melo HOM05D000955 ORTHO05D001429 3.9e-16 88.2 84 47.6
ClCG08G015850 Citrullus lanatus HOM05D000955 ORTHO05D001429 5.1e-16 87.8 84 48.8
Sed0017113 Sechium edule HOM05D000955 ORTHO05D001429 1.1e-13 80.1 81 46.9
Sed0019916 Sechium edule HOM05D000955 ORTHO05D001429 1.1e-13 80.1 81 46.9
CsaV3_2G027960 Cucumis sativus L. HOM05D000955 ORTHO05D001429 1.8e-13 79.3 79 44.3
Sed0005408 Sechium edule HOM05D000955 ORTHO05D001429 1.8e-13 79.3 76 47.4
MELO3C010875.2 Cucumis melo HOM05D000955 ORTHO05D001429 2.4e-13 79.0 79 44.3
CsaV3_2G027890 Cucumis sativus L. HOM05D000955 ORTHO05D001429 6.9e-13 77.4 81 48.1
ClCG08G015820 Citrullus lanatus HOM05D000955 ORTHO05D001429 3.4e-12 75.1 73 45.2
MELO3C010874.2 Cucumis melo HOM05D000955 ORTHO05D001429 3.4e-12 75.1 76 44.7
Sed0008843 Sechium edule HOM05D000955 ORTHO05D001429 5.8e-12 74.3 76 44.7
Sed0008712 Sechium edule HOM05D000955 ORTHO05D001429 1.7e-11 72.8 74 45.9
CsaV3_2G027950 Cucumis sativus L. HOM05D000955 ORTHO05D001429 2.2e-11 72.4 76 44.7
ClCG08G015840 Citrullus lanatus HOM05D000955 ORTHO05D001429 1.4e-10 69.7 81 43.2
Sed0027202 Sechium edule HOM05D000955 ORTHO05D001429 1.4e-10 69.7 73 43.8
ClCG08G015800 Citrullus lanatus HOM05D000955 ORTHO05D001429 2.7e-09 65.5 83 39.8
Manes.04G102900 Manihot esculenta HOM05D000955 ORTHO05D001429 3.5e-09 65.1 70 45.7
Sed0019911 Sechium edule HOM05D000955 ORTHO05D001429 3.5e-09 65.1 74 39.2
Manes.04G103100 Manihot esculenta HOM05D000955 ORTHO05D001429 1.0e-08 63.5 74 43.2
CsaV3_2G027970 Cucumis sativus L. HOM05D000955 ORTHO05D001429 1.3e-08 63.2 86 37.2
Manes.04G102800 Manihot esculenta HOM05D000955 ORTHO05D001429 1.8e-08 62.8 70 44.3
AUR62014425 Chenopodium quinoa HOM05D000955 ORTHO05D001429 2.3e-08 62.4 88 35.2
MELO3C016746.2 Cucumis melo HOM05D000955 ORTHO05D001429 2.3e-08 62.4 78 42.3
CsaV3_2G027870 Cucumis sativus L. HOM05D000955 ORTHO05D001429 2.3e-08 62.4 78 37.2
MELO3C010868.2 Cucumis melo HOM05D000955 ORTHO05D001429 3.0e-08 62.0 78 37.2
Atru.chr13.662 Acer truncatum HOM05D000955 ORTHO05D001429 3.9e-08 61.6 71 36.6
AUR62019161 Chenopodium quinoa HOM05D000955 ORTHO05D001429 3.9e-08 61.6 88 35.2
AUR62034572 Chenopodium quinoa HOM05D000955 ORTHO05D001429 3.9e-08 61.6 88 35.2
ClCG11G000380 Citrullus lanatus HOM05D000955 ORTHO05D001429 3.9e-08 61.6 87 35.6
CsaV3_2G027900 Cucumis sativus L. HOM05D034131 ORTHO05D034681 3.9e-08 61.6 60 58.3
CsaV3_4G034260 Cucumis sativus L. HOM05D000955 ORTHO05D001429 3.9e-08 61.6 78 42.3
Manes.04G103000 Manihot esculenta HOM05D000955 ORTHO05D001429 3.9e-08 61.6 70 42.9
Sed0006046 Sechium edule HOM05D000955 ORTHO05D001429 5.1e-08 61.2 78 42.3
ClCG05G019810 Citrullus lanatus HOM05D000955 ORTHO05D001429 8.7e-08 60.5 78 41.0
Sed0021895 Sechium edule HOM05D000955 ORTHO05D001429 8.7e-08 60.5 77 39.0
Sed0014774 Sechium edule HOM05D000955 ORTHO05D001429 1.5e-07 59.7 77 37.7
Manes.04G102700 Manihot esculenta HOM05D000955 ORTHO05D001429 1.9e-07 59.3 69 39.1
Sed0011985 Sechium edule HOM05D000955 ORTHO05D001429 1.9e-07 59.3 82 34.1
Sed0019635 Sechium edule HOM05D000955 ORTHO05D001429 1.9e-07 59.3 82 34.1
Sed0009213 Sechium edule HOM05D000955 ORTHO05D001429 2.5e-07 58.9 77 37.7
Sed0023504 Sechium edule HOM05D000955 ORTHO05D001429 2.5e-07 58.9 77 37.7
ClCG08G015790 Citrullus lanatus HOM05D000955 ORTHO05D001429 3.3e-07 58.5 83 36.1
ClCG08G015860 Citrullus lanatus HOM05D000955 ORTHO05D001429 3.3e-07 58.5 78 35.9
Sed0024179 Sechium edule HOM05D000955 ORTHO05D001429 3.3e-07 58.5 81 33.3
Sc26g0000770 Simmondsia chinensis HOM05D000955 ORTHO05D001429 3.3e-07 58.5 73 41.1
Sed0004971 Sechium edule HOM05D000955 ORTHO05D001429 4.3e-07 58.2 82 35.4
Manes.18G036100 Manihot esculenta HOM05D000955 ORTHO05D001429 5.7e-07 57.8 73 37.0
Os09g0458900 Oryza sativa ssp. japonica HOM05D000955 ORTHO05D003340 5.7e-07 57.8 73 35.6
MELO3C010871.2 Cucumis melo HOM05D034131 ORTHO05D034681 7.4e-07 57.4 97 39.2
CsaV3_5G015470 Cucumis sativus L. HOM05D000955 ORTHO05D001429 7.4e-07 57.4 74 37.8
Sed0018620 Sechium edule HOM05D000955 ORTHO05D001429 9.6e-07 57.0 78 39.7
MELO3C010876.2 Cucumis melo HOM05D000955 ORTHO05D001429 1.3e-06 56.6 83 33.7
Sed0013848 Sechium edule HOM05D000955 ORTHO05D001429 1.3e-06 56.6 77 36.4
Sc26g0000780 Simmondsia chinensis HOM05D000955 ORTHO05D001429 1.6e-06 56.2 80 36.2
Manes.05G173200 Manihot esculenta HOM05D000955 ORTHO05D001429 2.1e-06 55.8 76 35.5
Os09g0458800 Oryza sativa ssp. japonica HOM05D000955 ORTHO05D003340 2.1e-06 55.8 68 38.2
Sed0008372 Sechium edule HOM05D000955 ORTHO05D001429 2.1e-06 55.8 77 37.7
AUR62010820 Chenopodium quinoa HOM05D006501 ORTHO05D008241 3.7e-06 55.1 91 39.6
MELO3C026462.2 Cucumis melo HOM05D000955 ORTHO05D001429 3.7e-06 55.1 82 34.1
MBI06_g36647_MAGBIO Magnolia biondii HOM05D000955 ORTHO05D003340 3.7e-06 55.1 75 41.3
COL.COLO4_26488 Corchorus olitorius HOM05D000955 ORTHO05D001429 4.8e-06 54.7 76 35.5
Zm00001eb100840 Zea mays HOM05D000955 ORTHO05D003340 4.8e-06 54.7 82 34.1
Atru.chr13.660 Acer truncatum HOM05D000955 ORTHO05D001429 6.2e-06 54.3 77 32.5
Aqoxy5G01248 Aquilegia oxysepala HOM05D000955 ORTHO05D003340 6.2e-06 54.3 78 34.6
EL10Ac1g00552 Beta vulgaris HOM05D000955 ORTHO05D001429 6.2e-06 54.3 74 35.1
Prupe.1G436900 Prunus persica HOM05D000955 ORTHO05D001429 6.2e-06 54.3 79 29.1
Sed0000195 Sechium edule HOM05D000955 ORTHO05D001429 6.2e-06 54.3 75 36.0
Cfa018534 Carpinus fangiana HOM05D000955 ORTHO05D001429 8.2e-06 53.9 79 38.0
Prupe.1G436800 Prunus persica HOM05D000955 ORTHO05D001429 8.2e-06 53.9 80 30.0
Prupe.1G437000 Prunus persica HOM05D000955 ORTHO05D001429 8.2e-06 53.9 80 30.0


User provided reference genes

Program Settings