Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_2G025970 Cucumis sativus L. HOM05D016579 ORTHO05D019021 7.1e-40 166.8 82 100.0
CsaV3_1G034230 Cucumis sativus L. HOM05D016579 ORTHO05D019021 1.3e-20 102.8 86 65.1
CsaV3_1G034120 Cucumis sativus L. HOM05D016579 ORTHO05D019021 1.1e-19 99.8 82 63.4
CsaV3_1G034140 Cucumis sativus L. HOM05D016579 ORTHO05D019021 2.4e-19 98.6 86 62.8
CsaV3_1G034210 Cucumis sativus L. HOM05D016579 ORTHO05D019021 2.4e-19 98.6 86 62.8
MELO3C030339.2 Cucumis melo HOM05D016579 ORTHO05D019021 9.3e-16 86.7 80 62.5
ClCG08G016640 Citrullus lanatus HOM05D016579 ORTHO05D019021 6.7e-14 80.5 73 61.6
CiPaw.05G020600 Carya illinoinensis HOM05D001756 ORTHO05D001581 1.6e-07 59.3 78 37.2
arahy.Tifrunner.gnm1.ann1.F1MTJK Arachis hypogaea HOM05D001756 ORTHO05D001581 4.6e-07 57.8 75 38.7
TWI23G1082 Tripterygium wilfordii HOM05D001756 ORTHO05D001581 7.9e-07 57.0 75 38.7
CSS0039448 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 1.0e-06 56.6 69 40.6
Dinv16070 Davidia involucrata HOM05D001756 ORTHO05D001581 1.3e-06 56.2 78 38.5
HanXRQChr03g0074741 Helianthus annuus HOM05D001756 ORTHO05D001581 1.8e-06 55.8 73 39.7
Lsat_1_v5_gn_5_117161 Lactuca sativa HOM05D001756 ORTHO05D001581 2.3e-06 55.5 81 32.1
CiPaw.06G164100 Carya illinoinensis HOM05D001756 ORTHO05D001581 3.0e-06 55.1 70 42.9
arahy.Tifrunner.gnm1.ann1.22FXNP Arachis hypogaea HOM05D001756 ORTHO05D001581 3.9e-06 54.7 76 40.8
Haze_10304 Corylus avellana HOM05D001756 ORTHO05D001581 3.9e-06 54.7 80 38.8
CSS0000381 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 5.1e-06 54.3 74 40.5
Gorai.008G174400 Gossypium raimondii HOM05D012046 ORTHO05D011469 5.1e-06 54.3 63 39.7
Potri.002G116300 Populus trichocarpa HOM05D001756 ORTHO05D001581 5.1e-06 54.3 68 39.7
TAR628G0014 Trochodendron aralioides HOM05D001756 ORTHO05D001581 5.1e-06 54.3 68 42.6
Sed0013438 Sechium edule HOM05D016579 ORTHO05D019021 6.7e-06 53.9 91 44.0
Lalb_Chr06g0164991 Lupinus albus HOM05D001756 ORTHO05D001581 8.7e-06 53.5 55 49.1
TWI59G0044 Tripterygium wilfordii HOM05D001756 ORTHO05D001581 8.7e-06 53.5 74 35.1


User provided reference genes

Program Settings