Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_2G018080 Cucumis sativus L. HOM05D006928 ORTHO05D008618 1.2e-43 179.5 95 100.0
ClCG02G000690 Citrullus lanatus HOM05D006928 ORTHO05D008618 7.9e-43 176.8 95 97.9
Sed0020530 Sechium edule HOM05D006928 ORTHO05D008618 3.0e-42 174.9 95 96.8
COL.COLO4_22417 Corchorus olitorius HOM05D006928 ORTHO05D008618 5.5e-36 154.1 95 86.3
RcHm_v2.0_Chr2g0119151 Rosa chinensis HOM05D006928 ORTHO05D008618 5.5e-36 154.1 95 85.3
Gohir.A02G138100 Gossypium hirsutum HOM05D006928 ORTHO05D008618 1.2e-35 152.9 95 86.3
Gohir.D03G048800 Gossypium hirsutum HOM05D006928 ORTHO05D008618 1.2e-35 152.9 95 86.3
Gorai.003G050100 Gossypium raimondii HOM05D006928 ORTHO05D008618 1.2e-35 152.9 95 86.3
Eucgr.I00245 Eucalyptus grandis HOM05D006928 ORTHO05D008618 2.7e-35 151.8 93 82.8
Dinv09934 Davidia involucrata HOM05D006928 ORTHO05D008618 3.6e-35 151.4 95 83.2
Prupe.6G162900 Prunus persica HOM05D006928 ORTHO05D008618 4.7e-35 151.0 95 84.2
FAN23G1796 Fragaria x ananassa HOM05D006928 ORTHO05D008618 6.1e-35 150.6 95 84.2
FAN28G2803 Fragaria x ananassa HOM05D006928 ORTHO05D008618 6.1e-35 150.6 95 84.2
CANSAT01G1375 Cannabis sativa HOM05D006928 ORTHO05D008618 7.9e-35 150.2 95 84.2
CSS0007569 Camellia sinensis var. sinensis HOM05D006928 ORTHO05D008618 1.0e-34 149.8 95 80.0
CSS0018620 Camellia sinensis var. sinensis HOM05D006928 ORTHO05D008618 1.0e-34 149.8 95 80.0
Manes.12G150300 Manihot esculenta HOM05D006928 ORTHO05D008618 1.0e-34 149.8 95 85.3
FvH4_1g23590 Fragaria vesca HOM05D006928 ORTHO05D008618 1.4e-34 149.4 95 83.2
FAN19G2906 Fragaria x ananassa HOM05D006928 ORTHO05D008618 1.4e-34 149.4 95 83.2
Potri.001G309200 Populus trichocarpa HOM05D006928 ORTHO05D008618 1.4e-34 149.4 95 84.2
Sabra16G0195000 Salix brachista HOM05D006928 ORTHO05D008618 1.4e-34 149.4 95 84.2
MD15G1343100 Malus domestica HOM05D006928 ORTHO05D008618 2.3e-34 148.7 95 83.2
Actinidia17615 Actinidia chinensis HOM05D006928 ORTHO05D008618 3.0e-34 148.3 95 83.2
Glyma.08G146400 Glycine max HOM05D006928 ORTHO05D008618 5.2e-34 147.5 93 78.5
Duzib187G1761 Durio zibethinus HOM05D006928 ORTHO05D008618 6.7e-34 147.1 95 83.2
Thecc.01G120800 Theobroma cacao HOM05D006928 ORTHO05D008618 6.7e-34 147.1 88 84.1
Ciclev10026852m.g Citrus clementina HOM05D006928 ORTHO05D008618 8.8e-34 146.7 87 85.1
Duzib264G0933 Durio zibethinus HOM05D006928 ORTHO05D008618 8.8e-34 146.7 95 82.1
PGR119G2472 Punica granatum HOM05D006928 ORTHO05D008618 8.8e-34 146.7 95 77.9
GSVIVG01026587001 Vitis vinifera HOM05D006928 ORTHO05D008618 1.5e-33 146.0 95 81.1
Cfa002868 Carpinus fangiana HOM05D006928 ORTHO05D008618 2.0e-33 145.6 93 78.5
Glyma.05G188300 Glycine max HOM05D006928 ORTHO05D008618 3.3e-33 144.8 93 77.4
TPR.G2179 Trifolium pratense HOM05D006928 ORTHO05D008618 3.3e-33 144.8 93 75.3
Atru.chr4.541 Acer truncatum HOM05D006928 ORTHO05D008618 4.4e-33 144.4 95 80.0
Peaxi162Scf00025g02217 Petunia axillaris HOM05D006928 ORTHO05D008618 4.4e-33 144.4 95 80.0
Phvul.002G269100 Phaseolus vulgaris HOM05D006928 ORTHO05D008618 4.4e-33 144.4 93 76.3
TWI75G0630 Tripterygium wilfordii HOM05D006928 ORTHO05D008618 4.4e-33 144.4 95 81.1
TAR381G0700 Trochodendron aralioides HOM05D006928 ORTHO05D008618 4.4e-33 144.4 87 82.8
Lj4g0006915 Lotus japonicus HOM05D006928 ORTHO05D008618 5.7e-33 144.1 93 74.2
Lalb_Chr12g0203321 Lupinus albus HOM05D006928 ORTHO05D008618 7.4e-33 143.7 87 81.6
Nitab4.5_0010284g0020 Nicotiana tabacum HOM05D006928 ORTHO05D008618 1.3e-32 142.9 95 80.0
Aqoxy3G02632 Aquilegia oxysepala HOM05D006928 ORTHO05D008618 1.7e-32 142.5 87 81.6
Nn1g06098 Nelumbo nucifera HOM05D006928 ORTHO05D008618 1.7e-32 142.5 85 80.0
Hund03424 Selenicereus undatus HOM05D006928 ORTHO05D008618 1.7e-32 142.5 85 82.4
Sc16g0003960 Simmondsia chinensis HOM05D006928 ORTHO05D008618 1.7e-32 142.5 93 76.3
AL8G42110 Arabidopsis lyrata HOM05D006928 ORTHO05D008618 2.8e-32 141.7 92 79.3
MSTRG.2691 Avicennia marina HOM05D006928 ORTHO05D008618 3.7e-32 141.4 93 80.6
Psat7g048720 Pisum sativum HOM05D006928 ORTHO05D008618 3.7e-32 141.4 93 74.2
Cc00_g00790 Coffea canephora HOM05D006928 ORTHO05D008618 6.3e-32 140.6 95 76.8
Cc07_g17360 Coffea canephora HOM05D006928 ORTHO05D008618 6.3e-32 140.6 95 76.8
AUR62003624 Chenopodium quinoa HOM05D006928 ORTHO05D008618 8.2e-32 140.2 95 75.8
Sp2g27750 Schrenkiella parvula HOM05D006928 ORTHO05D008618 8.2e-32 140.2 87 80.5
Thhalv10005190m.g Eutrema salsugineum HOM05D006928 ORTHO05D008618 1.1e-31 139.8 87 79.3
CiPaw.04G083900 Carya illinoinensis HOM05D006928 ORTHO05D008618 1.4e-31 139.4 95 77.9
Nitab4.5_0002064g0030 Nicotiana tabacum HOM05D006928 ORTHO05D008618 1.4e-31 139.4 95 77.9
EL10Ac6g15253 Beta vulgaris HOM05D006928 ORTHO05D008618 1.8e-31 139.0 95 77.9
DCAR_027258 Daucus carota HOM05D006928 ORTHO05D008618 1.8e-31 139.0 93 76.3
BcaB04g19985 Brassica carinata HOM05D006928 ORTHO05D008618 2.4e-31 138.7 80 85.0
MBI09_g18622_MAGBIO Magnolia biondii HOM05D006928 ORTHO05D008618 2.4e-31 138.7 95 76.8
MBI09_g20115_MAGBIO Magnolia biondii HOM05D006928 ORTHO05D008618 2.4e-31 138.7 95 76.8
THA.LOC104799431 Tarenaya hassleriana HOM05D006928 ORTHO05D008618 2.4e-31 138.7 87 79.3
Aa31LG1G17250 Aethionema arabicum HOM05D006928 ORTHO05D008618 3.1e-31 138.3 85 81.2
PSO541G1601 Papaver somniferum HOM05D006928 ORTHO05D008618 4.1e-31 137.9 87 78.2
Sp6g33580 Schrenkiella parvula HOM05D006928 ORTHO05D008618 4.1e-31 137.9 93 74.2
Carub.0008s2549 Capsella rubella HOM05D006928 ORTHO05D008618 5.3e-31 137.5 88 78.4
BraA09t36529Z Brassica rapa HOM05D006928 ORTHO05D008618 7.0e-31 137.1 87 78.2
Migut.H01113 Erythranthe guttata HOM05D006928 ORTHO05D008618 1.2e-30 136.3 83 80.7
THA.LOC104818466 Tarenaya hassleriana HOM05D006928 ORTHO05D008618 1.2e-30 136.3 87 78.2
BolC9t53907H Brassica oleracea HOM05D006928 ORTHO05D008618 2.0e-30 135.6 87 77.0
CARHR278670 Cardamine hirsuta HOM05D006928 ORTHO05D008618 2.0e-30 135.6 87 77.0
PSO675G6866 Papaver somniferum HOM05D006928 ORTHO05D008618 2.0e-30 135.6 87 77.0
Lsat_1_v5_gn_2_66720 Lactuca sativa HOM05D006928 ORTHO05D008618 1.0e-29 133.3 91 73.6
HanXRQChr15g0471661 Helianthus annuus HOM05D006928 ORTHO05D008618 1.3e-29 132.9 95 72.6
BcaB08g37169 Brassica carinata HOM05D006928 ORTHO05D008618 1.7e-29 132.5 91 72.5
C09p67690 Brassica napus HOM05D006928 ORTHO05D008618 1.7e-29 132.5 91 72.5
BolC9t59531H Brassica oleracea HOM05D006928 ORTHO05D008618 1.7e-29 132.5 91 72.5
Thhalv10015138m.g Eutrema salsugineum HOM05D006928 ORTHO05D008618 2.2e-29 132.1 93 71.0
Carub.0006s0825 Capsella rubella HOM05D006928 ORTHO05D008618 2.9e-29 131.7 91 74.7
Solyc11g005360.2 Solanum lycopersicum HOM05D006928 ORTHO05D008618 2.9e-29 131.7 91 76.9
Sopen11g001370 Solanum pennellii HOM05D006928 ORTHO05D008618 2.9e-29 131.7 91 76.9
A10p27630 Brassica napus HOM05D006928 ORTHO05D008618 3.8e-29 131.3 89 73.0
AL6G20240 Arabidopsis lyrata HOM05D006928 ORTHO05D008618 5.0e-29 131.0 85 77.6
BraA10t44815Z Brassica rapa HOM05D006928 ORTHO05D008618 5.0e-29 131.0 91 71.4
CDE12G0365 Ceratophyllum demersum HOM05D006928 ORTHO05D008618 1.1e-28 129.8 93 68.8
AT5G09830 Arabidopsis thaliana HOM05D006928 ORTHO05D008618 1.5e-28 129.4 85 75.3
BcaC04g23298 Brassica carinata HOM05D006928 ORTHO05D008618 1.9e-28 129.0 96 70.8
AagrBONN_evm.TU.Sc2ySwM_344.3776 Anthoceros agrestis HOM05D006928 ORTHO05D008618 3.2e-28 128.3 84 75.0
Pp3c4_15580 Physcomitrium patens HOM05D006928 ORTHO05D008618 4.2e-28 127.9 94 70.2
ECA238G4197 Erigeron canadensis HOM05D006928 ORTHO05D008618 5.5e-28 127.5 92 73.9
SMO351G0462 Selaginella moellendorffii HOM05D006928 ORTHO05D008618 1.0e-26 123.2 93 68.8
HPP92_027450 Vanilla planifolia HOM05D006928 ORTHO05D008618 5.2e-26 120.9 81 74.1
CDE04G1901 Ceratophyllum demersum HOM05D006928 ORTHO05D008618 2.0e-25 119.0 98 64.3
Actinidia26282 Actinidia chinensis HOM05D006928 ORTHO05D008618 3.3e-25 118.2 73 86.3
Mapoly0023s0156 Marchantia polymorpha HOM05D006928 ORTHO05D008618 5.7e-25 117.5 95 63.2
QL06p051863 Quercus lobata HOM05D006928 ORTHO05D008618 9.7e-25 116.7 74 83.8
Haze_25197 Corylus avellana HOM05D006928 ORTHO05D008618 1.7e-24 115.9 158 45.6
Haze_25192 Corylus avellana HOM05D006928 ORTHO05D008618 2.2e-24 115.5 73 79.5
TAR376G0498 Trochodendron aralioides HOM05D006928 ORTHO05D008618 3.7e-24 114.8 68 85.3
C09p09990 Brassica napus HOM05D006928 ORTHO05D008618 4.8e-24 114.4 90 66.7
Haze_25196 Corylus avellana HOM05D006928 ORTHO05D008618 6.3e-24 114.0 72 79.2
Rhsim08G0003500 Rhododendron simsii HOM05D002612 ORTHO05D008618 6.3e-24 114.0 74 81.1
SGA_v2.0_scaffold137G35109 Striga asiatica HOM05D006928 ORTHO05D008618 1.4e-23 112.8 69 84.1
Medtr8g092690 Medicago truncatula HOM05D006928 ORTHO05D008618 4.1e-23 111.3 72 73.6
Zm00001eb146740 Zea mays HOM05D006928 ORTHO05D008618 4.1e-23 111.3 96 63.5
Ah.03g146570 Amaranthus hybridus HOM05D006928 ORTHO05D008618 7.0e-23 110.5 74 79.7
Cpa.g.sc1003.1 Carica papaya HOM05D006928 ORTHO05D008618 9.1e-23 110.2 74 82.4
AUR62017933 Chenopodium quinoa HOM05D006928 ORTHO05D008618 3.5e-22 108.2 74 75.7
CAN.G249.11 Capsicum annuum HOM05D006928 ORTHO05D008618 5.9e-22 107.5 74 77.0
SalBow1G8150 Salvia bowleyana HOM05D006928 ORTHO05D008618 1.0e-21 106.7 75 76.0
unitig_0.g37 Utricularia gibba HOM05D006928 ORTHO05D008618 2.2e-21 105.5 66 77.3
CARHR203570 Cardamine hirsuta HOM05D006928 ORTHO05D008618 2.9e-21 105.1 66 77.3
CBR_g19927 Chara braunii HOM05D006928 ORTHO05D008618 5.5e-20 100.9 80 63.8
BcaB08g37178 Brassica carinata HOM05D006928 ORTHO05D008618 9.4e-20 100.1 91 58.2
Cre03.g164550 Chlamydomonas reinhardtii HOM05D006928 ORTHO05D008618 2.0e-17 92.4 79 60.8
Os01g0866600 Oryza sativa ssp. japonica HOM05D006928 ORTHO05D008618 9.8e-17 90.1 63 71.4
SEGI_33222 Sequoiadendron giganteum HOM05D006928 ORTHO05D008618 3.7e-16 88.2 110 49.1


User provided reference genes

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