Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_2G017150 Cucumis sativus L. HOM05D006676 ORTHO05D008394 1.4e-88 329.7 179 100.0
MELO3C020918.2 Cucumis melo HOM05D006676 ORTHO05D008394 9.2e-85 317.0 180 96.1
ClCG02G013070 Citrullus lanatus HOM05D006676 ORTHO05D008394 3.4e-79 298.5 179 89.9
Sed0003061 Sechium edule HOM05D006676 ORTHO05D008394 2.5e-74 282.3 179 84.4
Manes.13G131900 Manihot esculenta HOM05D006676 ORTHO05D008394 5.5e-53 211.5 179 64.8
CiPaw.01G028300 Carya illinoinensis HOM05D006676 ORTHO05D008394 3.7e-49 198.7 178 62.9
Dinv26772 Davidia involucrata HOM05D006676 ORTHO05D008394 3.1e-48 195.7 180 61.7
Prupe.7G145000 Prunus persica HOM05D006676 ORTHO05D008394 6.9e-48 194.5 181 61.9
PGR102G2956 Punica granatum HOM05D006676 ORTHO05D008394 2.0e-47 193.0 177 62.7
Ciclev10026596m.g Citrus clementina HOM05D006676 ORTHO05D008394 3.4e-47 192.2 174 60.9
MD02G1159200 Malus domestica HOM05D006676 ORTHO05D008394 3.4e-47 192.2 180 61.1
QL06p044204 Quercus lobata HOM05D006676 ORTHO05D008394 5.0e-46 188.3 173 60.1
TWI09G1529 Tripterygium wilfordii HOM05D006676 ORTHO05D008394 1.1e-45 187.2 182 62.1
Eucgr.H01944 Eucalyptus grandis HOM05D006676 ORTHO05D008394 1.9e-45 186.4 176 60.8
Hma1.2p1_0261F.1_g105020 Hydrangea macrophylla HOM05D006676 ORTHO05D008394 2.5e-45 186.0 181 60.8
COL.COLO4_22185 Corchorus olitorius HOM05D006676 ORTHO05D008394 3.2e-45 185.7 178 61.8
Glyma.11G060600 Glycine max HOM05D006676 ORTHO05D008394 2.1e-44 183.0 180 58.3
Duzib187G2000 Durio zibethinus HOM05D006676 ORTHO05D008394 2.7e-44 182.6 178 61.8
Gohir.A02G161300 Gossypium hirsutum HOM05D006676 ORTHO05D008394 3.6e-44 182.2 178 60.1
Thecc.01G046000 Theobroma cacao HOM05D006676 ORTHO05D008394 3.6e-44 182.2 179 62.0
Glyma.01G182300 Glycine max HOM05D006676 ORTHO05D008394 4.6e-44 181.8 180 57.8
Gorai.003G019600 Gossypium raimondii HOM05D006676 ORTHO05D008394 6.1e-44 181.4 178 59.0
Lj2g0022488 Lotus japonicus HOM05D006676 ORTHO05D008394 6.1e-44 181.4 180 57.2
FAN23G1040 Fragaria x ananassa HOM05D006676 ORTHO05D008394 7.9e-44 181.0 180 59.4
MD00G1067500 Malus domestica HOM05D006676 ORTHO05D008394 7.9e-44 181.0 179 57.0
Potri.007G034600 Populus trichocarpa HOM05D006676 ORTHO05D008394 7.9e-44 181.0 185 57.3
TAR625G0739 Trochodendron aralioides HOM05D006676 ORTHO05D008394 7.9e-44 181.0 179 59.2
Nn6g32155 Nelumbo nucifera HOM05D006676 ORTHO05D008394 1.4e-43 180.3 179 58.1
Gohir.D03G019200 Gossypium hirsutum HOM05D006676 ORTHO05D008394 5.1e-43 178.3 178 59.0
arahy.Tifrunner.gnm1.ann1.TQQ6DV Arachis hypogaea HOM05D006676 ORTHO05D008394 6.7e-43 177.9 189 57.7
CANSAT01G0168 Cannabis sativa HOM05D006676 ORTHO05D008394 3.3e-42 175.6 180 60.0
RcHm_v2.0_Chr2g0103301 Rosa chinensis HOM05D006676 ORTHO05D008394 4.3e-42 175.3 179 58.1
Actinidia36526 Actinidia chinensis HOM05D006676 ORTHO05D008394 7.4e-42 174.5 178 57.9
Sabra07G0030200 Salix brachista HOM05D001814 ORTHO05D001845 1.7e-41 173.3 189 56.1
ECA232G0167 Erigeron canadensis HOM05D006676 ORTHO05D008394 4.8e-41 171.8 180 59.4
FvH4_1g14550 Fragaria vesca HOM05D006676 ORTHO05D008394 4.8e-41 171.8 180 57.8
FAN19G1679 Fragaria x ananassa HOM05D006676 ORTHO05D008394 4.8e-41 171.8 180 57.8
Cfa004230 Carpinus fangiana HOM05D006676 ORTHO05D008394 8.2e-41 171.0 247 42.9
arahy.Tifrunner.gnm1.ann1.A5DXZZ Arachis hypogaea HOM05D006676 ORTHO05D008394 1.4e-40 170.2 190 56.8
Lalb_Chr05g0213091 Lupinus albus HOM05D006676 ORTHO05D008394 1.4e-40 170.2 182 54.9
Oeu032926.1 Olea europaea HOM05D006676 ORTHO05D008394 2.4e-40 169.5 184 58.2
Actinidia12084 Actinidia chinensis HOM05D006676 ORTHO05D008394 5.3e-40 168.3 183 56.8
Sopen02g015580 Solanum pennellii HOM05D006676 ORTHO05D008394 1.5e-39 166.8 180 56.1
PSO675G6281 Papaver somniferum HOM05D006676 ORTHO05D008394 2.6e-39 166.0 180 53.3
PSO541G6387 Papaver somniferum HOM05D006676 ORTHO05D008394 7.7e-39 164.5 179 52.5
FAN26G0249 Fragaria x ananassa HOM05D006676 ORTHO05D008394 1.0e-38 164.1 180 54.4
MSTRG.15406 Avicennia marina HOM05D006676 ORTHO05D008394 1.7e-38 163.3 176 55.7
arahy.Tifrunner.gnm1.ann1.MI0500 Arachis hypogaea HOM05D006676 ORTHO05D008394 2.2e-38 162.9 191 55.0
Ca_24806_v3 Cicer arietinum L. HOM05D006676 ORTHO05D008394 2.5e-37 159.5 180 53.9
Phvul.002G023300 Phaseolus vulgaris HOM05D006676 ORTHO05D008394 4.2e-37 158.7 180 51.1
Cc07_g05420 Coffea canephora HOM05D006676 ORTHO05D008394 9.4e-37 157.5 175 52.6
FAN28G2791 Fragaria x ananassa HOM05D006676 ORTHO05D008394 9.4e-37 157.5 180 52.8
VMungo1215G3052 Vigna mungo HOM05D006676 ORTHO05D008394 2.7e-36 156.0 180 51.7
Aqoxy6G00953 Aquilegia oxysepala HOM05D006676 ORTHO05D008394 7.9e-36 154.5 185 51.9
Lj7A15T51 Lonicera japonica HOM05D006676 ORTHO05D008394 7.9e-36 154.5 185 55.7
Hund14112 Selenicereus undatus HOM05D006676 ORTHO05D008394 1.4e-35 153.7 182 55.5
EL10Ac6g14836 Beta vulgaris HOM05D006676 ORTHO05D008394 2.3e-35 152.9 182 54.4
AUR62027231 Chenopodium quinoa HOM05D006676 ORTHO05D008394 6.7e-35 151.4 175 55.4
CDE02G4077 Ceratophyllum demersum HOM05D006676 ORTHO05D008394 2.0e-34 149.8 174 51.1
Duzib147G0589 Durio zibethinus HOM05D006676 ORTHO05D008394 5.7e-34 148.3 177 51.4
Solyc02g065370.3 Solanum lycopersicum HOM05D006676 ORTHO05D008394 2.2e-33 146.4 180 52.2
HanXRQChr15g0489591 Helianthus annuus HOM05D006676 ORTHO05D008394 6.3e-33 144.8 175 54.3
Nitab4.5_0000090g0080 Nicotiana tabacum HOM05D006676 ORTHO05D008394 1.8e-32 143.3 180 49.4
Psat2g163920 Pisum sativum HOM05D006676 ORTHO05D008394 1.8e-32 143.3 191 49.7
Cpa.g.sc15.74 Carica papaya HOM05D006676 ORTHO05D008394 3.1e-32 142.5 137 56.9
Rhsim08G0109100 Rhododendron simsii HOM05D006676 ORTHO05D008394 1.2e-31 140.6 276 38.8
Nitab4.5_0002126g0070 Nicotiana tabacum HOM05D006676 ORTHO05D008394 2.0e-31 139.8 180 50.6
CAN.G93.2 Capsicum annuum HOM05D006676 ORTHO05D008394 1.3e-30 137.1 178 48.9
Thhalv10026327m.g Eutrema salsugineum HOM05D006676 ORTHO05D008394 5.0e-30 135.2 179 48.6
Sc16g0001500 Simmondsia chinensis HOM05D006676 ORTHO05D008394 1.5e-29 133.7 182 48.9
Sp7g34680 Schrenkiella parvula HOM05D006676 ORTHO05D008394 1.9e-29 133.3 172 50.0
Carub.0007s0328 Capsella rubella HOM05D006676 ORTHO05D008394 2.5e-29 132.9 189 45.5
AL7G13870 Arabidopsis lyrata HOM05D006676 ORTHO05D008394 1.6e-28 130.2 185 45.9
AT4G37090 Arabidopsis thaliana HOM05D006676 ORTHO05D008394 3.6e-28 129.0 183 45.9
PGSC0003DMG400002746 Solanum tuberosum HOM05D006676 ORTHO05D008394 1.0e-27 127.5 180 47.2
TPR.G29856 Trifolium pratense HOM05D006676 ORTHO05D008394 1.0e-27 127.5 200 43.5
HPP92_004789 Vanilla planifolia HOM05D006676 ORTHO05D008394 8.8e-27 124.4 217 41.9
Zm00001eb206480 Zea mays HOM05D006676 ORTHO05D008394 1.5e-26 123.6 171 45.0
CARHR245420 Cardamine hirsuta HOM05D006676 ORTHO05D008394 5.7e-26 121.7 186 42.5
Aa31LG6G13890 Aethionema arabicum HOM05D006676 ORTHO05D008394 9.7e-26 120.9 172 44.2
Medtr5g018550 Medicago truncatula HOM05D006676 ORTHO05D008394 1.7e-25 120.2 183 42.6
Os02g0186700 Oryza sativa ssp. japonica HOM05D006676 ORTHO05D008394 4.8e-25 118.6 183 44.3
BraA01t00181Z Brassica rapa HOM05D006676 ORTHO05D008394 8.2e-25 117.9 183 44.8
BcaNung03502 Brassica carinata HOM05D006676 ORTHO05D008394 1.1e-24 117.5 182 44.0
MBI04_g03667_MAGBIO Magnolia biondii HOM05D006676 ORTHO05D008394 1.1e-24 117.5 153 47.1
DCAR_025672 Daucus carota HOM05D006676 ORTHO05D008394 1.4e-24 117.1 142 50.0
AUR62003241 Chenopodium quinoa HOM05D006676 ORTHO05D008394 1.8e-24 116.7 175 45.7
Dinv39914 Davidia involucrata HOM05D006676 ORTHO05D008394 1.8e-24 116.7 97 66.0
C01p02080 Brassica napus HOM05D006676 ORTHO05D008394 5.3e-24 115.2 182 44.0
BolC1t00200H Brassica oleracea HOM05D006676 ORTHO05D008394 5.3e-24 115.2 182 44.0
BolC3t20221H Brassica oleracea HOM05D006676 ORTHO05D008394 5.3e-24 115.2 177 43.5
vmacro17885 Vaccinium macrocarpon HOM05D006676 ORTHO05D008394 7.0e-24 114.8 232 41.4
BcaC01g00433 Brassica carinata HOM05D006676 ORTHO05D008394 1.2e-23 114.0 177 42.9
C03p79700 Brassica napus HOM05D006676 ORTHO05D008394 1.2e-23 114.0 177 42.9
SGA_v2.0_scaffold1G00184 Striga asiatica HOM05D006676 ORTHO05D008394 2.0e-23 113.2 127 56.7
A01p01920 Brassica napus HOM05D006676 ORTHO05D008394 2.6e-23 112.8 184 42.4
SGA_v2.0_scaffold175G39367 Striga asiatica HOM05D006676 ORTHO05D008394 1.7e-22 110.2 141 50.4
unitig_749.g13556 Utricularia gibba HOM05D006676 ORTHO05D008394 3.8e-22 109.0 161 45.3
Ah.02g126080 Amaranthus hybridus HOM05D006676 ORTHO05D008394 1.5e-21 107.1 148 48.6
Migut.K00838 Erythranthe guttata HOM05D006676 ORTHO05D008394 2.5e-21 106.3 185 42.2
Peaxi162Scf00019g02117 Petunia axillaris HOM05D006676 ORTHO05D008394 4.2e-21 105.5 175 41.7
BraA08t34206Z Brassica rapa HOM05D006676 ORTHO05D008394 1.8e-19 100.1 180 42.8
Aqoxy2G03321 Aquilegia oxysepala HOM05D006676 ORTHO05D008394 9.8e-18 94.4 143 47.6
Aqoxy6G00951 Aquilegia oxysepala HOM05D006676 ORTHO05D008394 9.8e-18 94.4 143 47.6
GSVIVG01005096001 Vitis vinifera HOM05D006676 ORTHO05D008394 2.8e-17 92.8 97 54.6
GSVIVG01004606001 Vitis vinifera HOM05D006676 ORTHO05D008394 3.7e-17 92.4 97 53.6
A08p22510 Brassica napus HOM05D006676 ORTHO05D008394 3.1e-16 89.4 180 40.0
Sc16g0001490 Simmondsia chinensis HOM05D006676 ORTHO05D008394 5.9e-15 85.1 80 58.8
Haze_15170 Corylus avellana HOM05D006676 ORTHO05D008394 2.2e-14 83.2 184 32.6
THA.LOC104819832 Tarenaya hassleriana HOM05D006676 ORTHO05D008394 8.5e-14 81.3 182 38.5
MBI15_g03557_MAGBIO Magnolia biondii HOM05D006676 ORTHO05D008394 3.6e-12 75.9 80 55.0
arahy.Tifrunner.gnm1.ann1.9JJG5X Arachis hypogaea HOM05D006676 ORTHO05D008394 3.0e-11 72.8 126 43.7
ATR0800G049 Amborella trichopoda HOM05D006676 ORTHO05D008394 2.6e-10 69.7 85 50.6
CDE01G0251 Ceratophyllum demersum HOM05D006676 ORTHO05D008394 1.2e-07 60.8 70 50.0
BcaB03g12363 Brassica carinata HOM05D006676 ORTHO05D008394 2.9e-06 56.2 174 32.8
BcaB03g12365 Brassica carinata HOM05D006676 ORTHO05D008394 8.6e-06 54.7 56 48.2


User provided reference genes

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