Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_2G014570 Cucumis sativus L. HOM05D005136 ORTHO05D006619 1.9e-72 275.8 147 100.0
MELO3C020986.2 Cucumis melo HOM05D005136 ORTHO05D006619 4.8e-71 271.2 147 98.0
Sed0024996 Sechium edule HOM05D005136 ORTHO05D006619 1.5e-69 266.2 147 95.9
ClCG11G004520 Citrullus lanatus HOM05D005136 ORTHO05D006619 2.0e-69 265.8 147 95.9
Cfa005022 Carpinus fangiana HOM05D005136 ORTHO05D006619 3.1e-62 241.9 147 88.4
Haze_02365 Corylus avellana HOM05D005136 ORTHO05D006619 3.1e-62 241.9 147 88.4
Thecc.02G123900 Theobroma cacao HOM05D005136 ORTHO05D006619 2.6e-61 238.8 147 85.7
Potri.004G152700 Populus trichocarpa HOM05D005136 ORTHO05D006619 3.4e-61 238.4 147 83.0
COL.COLO4_32439 Corchorus olitorius HOM05D005136 ORTHO05D006619 1.3e-60 236.5 147 84.4
Manes.17G099700 Manihot esculenta HOM05D005136 ORTHO05D006619 1.7e-60 236.1 147 84.4
CiPaw.05G062700 Carya illinoinensis HOM05D005136 ORTHO05D006619 2.2e-60 235.7 147 85.7
QL11p043069 Quercus lobata HOM05D005136 ORTHO05D006619 2.2e-60 235.7 146 87.7
FvH4_2g08450 Fragaria vesca HOM05D005136 ORTHO05D006619 1.1e-59 233.4 144 84.7
FAN24G0166 Fragaria x ananassa HOM05D005136 ORTHO05D006619 1.1e-59 233.4 144 84.7
RcHm_v2.0_Chr6g0263731 Rosa chinensis HOM05D005136 ORTHO05D006619 1.1e-59 233.4 144 84.7
Duzib132G0024 Durio zibethinus HOM05D005136 ORTHO05D006619 1.9e-59 232.6 147 85.7
FAN15G2434 Fragaria x ananassa HOM05D005136 ORTHO05D006619 2.5e-59 232.3 144 84.0
CiPaw.06G136800 Carya illinoinensis HOM05D005136 ORTHO05D006619 4.2e-59 231.5 147 85.0
FAN27G1698 Fragaria x ananassa HOM05D005136 ORTHO05D006619 4.2e-59 231.5 144 84.0
Dinv23543 Davidia involucrata HOM05D005136 ORTHO05D006619 5.5e-59 231.1 147 83.0
Ciclev10029521m.g Citrus clementina HOM05D005136 ORTHO05D006619 7.2e-59 230.7 147 83.7
Cc02_g17760 Coffea canephora HOM05D005136 ORTHO05D006619 7.2e-59 230.7 147 83.7
vmacro08119 Vaccinium macrocarpon HOM05D005136 ORTHO05D006619 7.2e-59 230.7 147 83.7
Cpa.g.sc31.66 Carica papaya HOM05D005136 ORTHO05D006619 1.2e-58 229.9 147 83.7
Gohir.D12G018500 Gossypium hirsutum HOM05D005136 ORTHO05D006619 2.7e-58 228.8 147 82.3
Gorai.008G018800 Gossypium raimondii HOM05D005136 ORTHO05D006619 2.7e-58 228.8 147 82.3
MD05G1068400 Malus domestica HOM05D005136 ORTHO05D006619 2.7e-58 228.8 147 83.7
Rhsim11G0174400 Rhododendron simsii HOM05D005136 ORTHO05D006619 2.7e-58 228.8 147 83.0
VMungo1215G0362 Vigna mungo HOM05D005136 ORTHO05D006619 2.7e-58 228.8 147 82.3
Gohir.A12G017900 Gossypium hirsutum HOM05D005136 ORTHO05D006619 3.6e-58 228.4 147 82.3
TAR625G1013 Trochodendron aralioides HOM05D005136 ORTHO05D006619 3.6e-58 228.4 147 82.3
Phvul.002G127500 Phaseolus vulgaris HOM05D005136 ORTHO05D006619 4.6e-58 228.0 147 82.3
Cc02_g20820 Coffea canephora HOM05D005136 ORTHO05D006619 6.1e-58 227.6 147 83.0
Atru.chr8.1229 Acer truncatum HOM05D005136 ORTHO05D006619 1.0e-57 226.9 147 83.0
Glyma.04G123300 Glycine max HOM05D005136 ORTHO05D006619 1.8e-57 226.1 147 81.6
Eucgr.G00447 Eucalyptus grandis HOM05D005136 ORTHO05D006619 3.0e-57 225.3 147 81.6
MD10G1078600 Malus domestica HOM05D005136 ORTHO05D006619 3.0e-57 225.3 147 83.0
Prupe.8G100500 Prunus persica HOM05D005136 ORTHO05D006619 3.9e-57 224.9 147 84.4
Nitab4.5_0009564g0010 Nicotiana tabacum HOM05D005136 ORTHO05D006619 6.7e-57 224.2 148 82.4
TAR628G0554 Trochodendron aralioides HOM05D005136 ORTHO05D006619 6.7e-57 224.2 147 79.6
TAR628G1226 Trochodendron aralioides HOM05D005136 ORTHO05D006619 6.7e-57 224.2 147 79.6
Lj3g0003138 Lotus japonicus HOM05D005136 ORTHO05D006619 1.1e-56 223.4 147 82.3
Peaxi162Scf00346g00043 Petunia axillaris HOM05D005136 ORTHO05D006619 1.1e-56 223.4 147 81.0
Nn1g02125 Nelumbo nucifera HOM05D005136 ORTHO05D006619 3.3e-56 221.9 144 79.9
Dinv42084 Davidia involucrata HOM05D005136 ORTHO05D006619 5.7e-56 221.1 147 78.9
Ca_15377_v3 Cicer arietinum L. HOM05D005136 ORTHO05D006619 7.4e-56 220.7 147 81.0
Sopen08g026750 Solanum pennellii HOM05D005136 ORTHO05D006619 1.3e-55 219.9 147 78.2
PGSC0003DMG400026262 Solanum tuberosum HOM05D005136 ORTHO05D006619 2.8e-55 218.8 147 78.2
CSS0002049 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 3.7e-55 218.4 147 80.3
CSS0016345 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 3.7e-55 218.4 147 80.3
CSS0049550 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 3.7e-55 218.4 147 80.3
Hund22263 Selenicereus undatus HOM05D005136 ORTHO05D006619 3.7e-55 218.4 147 81.0
DCAR_026977 Daucus carota HOM05D005136 ORTHO05D006619 1.1e-54 216.9 147 78.2
Lalb_Chr19g0138591 Lupinus albus HOM05D005136 ORTHO05D006619 1.1e-54 216.9 144 78.5
Solyc08g078240.4 Solanum lycopersicum HOM05D005136 ORTHO05D006619 1.1e-54 216.9 144 77.8
CANSAT11G0677 Cannabis sativa HOM05D005136 ORTHO05D006619 1.8e-54 216.1 155 76.8
Hma1.2p1_1375F.1_g278970 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 1.8e-54 216.1 148 78.4
Hma1.2p1_3179F.1_g333696 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 1.8e-54 216.1 148 78.4
Lalb_Chr23g0265461 Lupinus albus HOM05D005136 ORTHO05D006619 3.1e-54 215.3 147 74.8
Medtr3g116260 Medicago truncatula HOM05D005136 ORTHO05D006619 3.1e-54 215.3 149 78.5
Migut.B00252 Erythranthe guttata HOM05D005136 ORTHO05D006619 4.1e-54 214.9 147 76.9
CSS0025161 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 6.9e-54 214.2 147 78.9
Psat5g007800 Pisum sativum HOM05D005136 ORTHO05D006619 6.9e-54 214.2 147 78.2
Aqoxy5G01670 Aquilegia oxysepala HOM05D005136 ORTHO05D006619 9.1e-54 213.8 150 76.7
Psat5g103000 Pisum sativum HOM05D005136 ORTHO05D006619 9.1e-54 213.8 147 78.2
MBI16_g37741_MAGBIO Magnolia biondii HOM05D005136 ORTHO05D006619 1.5e-53 213.0 147 78.9
CAN.G1312.12 Capsicum annuum HOM05D005136 ORTHO05D006619 4.5e-53 211.5 147 78.2
Glyma.09G214900 Glycine max HOM05D005136 ORTHO05D006619 4.5e-53 211.5 139 80.6
PGR042G3747 Punica granatum HOM05D005136 ORTHO05D006619 5.9e-53 211.1 147 76.9
SalBow6G6037 Salvia bowleyana HOM05D005136 ORTHO05D006619 5.9e-53 211.1 147 76.9
HanXRQChr05g0152051 Helianthus annuus HOM05D005136 ORTHO05D006619 1.0e-52 210.3 147 76.9
Lsat_1_v5_gn_7_89621 Lactuca sativa HOM05D005136 ORTHO05D006619 2.2e-52 209.1 147 74.8
PSO700G0271 Papaver somniferum HOM05D005136 ORTHO05D006619 2.2e-52 209.1 148 79.7
Ah.01g016850 Amaranthus hybridus HOM05D005136 ORTHO05D006619 5.0e-52 208.0 147 77.6
Oeu014338.1 Olea europaea HOM05D005136 ORTHO05D006619 5.0e-52 208.0 147 75.5
SGA_v2.0_scaffold106G30693 Striga asiatica HOM05D005136 ORTHO05D006619 8.5e-52 207.2 147 75.5
Lj5P199T42 Lonicera japonica HOM05D005136 ORTHO05D006619 1.9e-51 206.1 147 76.9
Nn1g05055 Nelumbo nucifera HOM05D005136 ORTHO05D006619 1.9e-51 206.1 147 74.8
ATR1120G109 Amborella trichopoda HOM05D005136 ORTHO05D006619 2.5e-51 205.7 149 75.2
Sc09g0004050 Simmondsia chinensis HOM05D005136 ORTHO05D006619 5.5e-51 204.5 149 76.5
AUR62038311 Chenopodium quinoa HOM05D005136 ORTHO05D006619 1.2e-50 203.4 147 75.5
AUR62023928 Chenopodium quinoa HOM05D005136 ORTHO05D006619 2.7e-50 202.2 147 74.8
THA.LOC104823526 Tarenaya hassleriana HOM05D005136 ORTHO05D006619 3.6e-50 201.8 151 72.8
MSTRG.16796 Avicennia marina HOM05D005136 ORTHO05D006619 7.9e-50 200.7 147 74.1
EL10Ac9g21088 Beta vulgaris HOM05D005136 ORTHO05D006619 7.9e-50 200.7 138 79.0
TWI31G0294 Tripterygium wilfordii HOM05D005136 ORTHO05D006619 1.0e-49 200.3 149 76.5
BcaB03g13232 Brassica carinata HOM05D005136 ORTHO05D006619 5.1e-49 198.0 152 71.7
TWI79G0765 Tripterygium wilfordii HOM05D005136 ORTHO05D006619 6.7e-49 197.6 152 75.7
HPP92_013432 Vanilla planifolia HOM05D005136 ORTHO05D006619 6.7e-49 197.6 150 70.0
HPP92_027116 Vanilla planifolia HOM05D005136 ORTHO05D006619 6.7e-49 197.6 150 70.0
Thhalv10008721m.g Eutrema salsugineum HOM05D005136 ORTHO05D006619 7.4e-48 194.1 158 70.3
Sp1g10380 Schrenkiella parvula HOM05D005136 ORTHO05D006619 9.7e-48 193.7 154 70.8
Aa31LG1G2990 Aethionema arabicum HOM05D005136 ORTHO05D006619 2.8e-47 192.2 151 70.2
BolC8t49124H Brassica oleracea HOM05D004968 ORTHO05D005922 6.3e-47 191.0 147 70.7
CARHR012080 Cardamine hirsuta HOM05D005136 ORTHO05D006619 8.2e-47 190.7 153 70.6
Gorai.005G228100 Gossypium raimondii HOM05D005136 ORTHO05D006619 1.1e-46 190.3 147 71.4
AL1G22940 Arabidopsis lyrata HOM05D005136 ORTHO05D006619 1.4e-46 189.9 155 69.7
C08p14950 Brassica napus HOM05D004968 ORTHO05D005922 1.8e-46 189.5 147 70.1
Gohir.D02G202838 Gossypium hirsutum HOM05D005136 ORTHO05D006619 5.3e-46 188.0 147 70.7
Gohir.A03G179300 Gossypium hirsutum HOM05D005136 ORTHO05D006619 9.1e-46 187.2 147 70.1
Actinidia00512 Actinidia chinensis HOM05D005136 ORTHO05D006619 2.6e-45 185.7 115 83.5
AT1G11760 Arabidopsis thaliana HOM05D005136 ORTHO05D006619 5.9e-45 184.5 154 67.5
Carub.0001s1142 Capsella rubella HOM05D005136 ORTHO05D006619 5.9e-45 184.5 155 67.1
unitig_37.g12818 Utricularia gibba HOM05D005136 ORTHO05D006619 8.5e-44 180.6 153 67.3
A08p33240 Brassica napus HOM05D004968 ORTHO05D005922 2.5e-43 179.1 146 67.8
BraA08t35243Z Brassica rapa HOM05D004968 ORTHO05D005922 2.5e-43 179.1 146 67.8
Nitab4.5_0002601g0030 Nicotiana tabacum HOM05D005136 ORTHO05D006619 3.3e-40 168.7 109 82.6
Os10g0548400 Oryza sativa ssp. japonica HOM05D005136 ORTHO05D006619 3.3e-40 168.7 161 60.2
PSO170G5319 Papaver somniferum HOM05D005136 ORTHO05D006619 3.3e-40 168.7 113 83.2
Prupe.5G020100 Prunus persica HOM05D005136 ORTHO05D006619 3.3e-40 168.7 150 62.0
TPR.G21542 Trifolium pratense HOM05D005136 ORTHO05D006619 4.8e-39 164.9 147 64.6
RcHm_v2.0_Chr6g0264001 Rosa chinensis HOM05D005136 ORTHO05D006619 7.0e-38 161.0 100 82.0
SalBow6G1117 Salvia bowleyana HOM05D005136 ORTHO05D006619 1.2e-37 160.2 105 79.0
ECA236G0931 Erigeron canadensis HOM05D005136 ORTHO05D006619 4.5e-37 158.3 149 61.7
BcaB08g37416 Brassica carinata HOM05D005136 ORTHO05D006619 2.9e-36 155.6 147 62.6
Zm00001eb284000 Zea mays HOM05D005136 ORTHO05D006619 3.2e-35 152.1 129 64.3
SHI23962 Sapria himalayana HOM05D005136 ORTHO05D006619 5.5e-35 151.4 133 65.4
CSS0021040 Camellia sinensis var. sinensis HOM05D005136 ORTHO05D006619 1.2e-34 150.2 140 66.4
EL10Ac7g17776 Beta vulgaris HOM05D005136 ORTHO05D006619 8.8e-33 144.1 127 64.6
Atru.chr5.2947 Acer truncatum HOM05D005136 ORTHO05D006619 1.3e-31 140.2 88 83.0
Pp3c10_12480 Physcomitrium patens HOM05D005136 ORTHO05D006619 1.6e-29 133.3 153 52.9
CDE02G3080 Ceratophyllum demersum HOM05D005136 ORTHO05D006619 3.2e-27 125.6 84 76.2
Mapoly0003s0019 Marchantia polymorpha HOM05D005136 ORTHO05D006619 8.0e-26 120.9 128 53.9
SMO174G0113 Selaginella moellendorffii HOM05D005136 ORTHO05D006619 1.8e-25 119.8 135 48.9
EL10Ac8g18726 Beta vulgaris HOM05D006015 ORTHO05D007816 2.3e-25 119.4 85 72.9
EL10Ac9g21097 Beta vulgaris HOM05D006015 ORTHO05D006619 2.3e-25 119.4 85 72.9
EL10Ac1g02225 Beta vulgaris HOM05D005136 ORTHO05D006619 3.1e-22 109.0 166 45.8
Medtr3g116310 Medicago truncatula HOM05D005136 ORTHO05D006619 9.1e-22 107.5 78 71.8
Psat4g095600 Pisum sativum HOM05D005136 ORTHO05D006619 6.6e-20 101.3 79 64.6
Oeu014337.1 Olea europaea HOM05D005136 ORTHO05D006619 4.2e-19 98.6 79 58.2
Sp2g23220 Schrenkiella parvula HOM05D005136 ORTHO05D006619 9.5e-19 97.4 92 57.6
Lj4g0027023 Lotus japonicus HOM05D005136 ORTHO05D006619 6.1e-18 94.7 145 46.2
Thecc.02G123800 Theobroma cacao HOM05D005136 ORTHO05D006619 1.4e-17 93.6 71 66.2
Hma1.2p1_0854F.1_g228935 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 3.0e-17 92.4 71 63.4
Hma1.2p1_2665F.1_g326510 Hydrangea macrophylla HOM05D005136 ORTHO05D006619 3.0e-17 92.4 71 63.4
Gohir.A03G179400 Gossypium hirsutum HOM05D005136 ORTHO05D006619 1.2e-16 90.5 69 65.2
Gorai.005G228200 Gossypium raimondii HOM05D005136 ORTHO05D006619 1.5e-16 90.1 69 65.2
Gohir.D02G202857 Gossypium hirsutum HOM05D005136 ORTHO05D006619 2.0e-16 89.7 69 63.8
AagrBONN_evm.TU.Sc2ySwM_369.532 Anthoceros agrestis HOM05D005136 ORTHO05D006619 3.4e-16 89.0 132 41.7
COL.COLO4_32440 Corchorus olitorius HOM05D005136 ORTHO05D006619 3.4e-16 89.0 69 59.4
Sc09g0004030 Simmondsia chinensis HOM05D005136 ORTHO05D006619 1.8e-14 83.2 72 68.1
Nitab4.5_0012262g0010 Nicotiana tabacum HOM05D005136 ORTHO05D006619 2.9e-12 75.9 72 54.2
Nitab4.5_0002541g0070 Nicotiana tabacum HOM05D005136 ORTHO05D024799 5.0e-12 75.1 72 54.2
CAN.G1435.13 Capsicum annuum HOM05D005136 ORTHO05D024799 3.6e-10 68.9 70 48.6
Os07g0229100 Oryza sativa ssp. japonica HOM05D011003 ORTHO05D012370 1.0e-09 67.4 72 50.0
ECA233G0803 Erigeron canadensis HOM05D005136 ORTHO05D006619 2.3e-09 66.2 125 41.6
Peaxi162Scf00316g00313 Petunia axillaris HOM05D005136 ORTHO05D006619 3.7e-07 58.9 51 60.8
Solyc09g082750.1 Solanum lycopersicum HOM05D005136 ORTHO05D024799 6.4e-07 58.2 72 41.7


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