Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_2G007430 Cucumis sativus L. HOM05D008155 ORTHO05D010411 1.5e-92 342.8 174 100.0
MELO3C004141.2 Cucumis melo HOM05D008155 ORTHO05D010411 7.6e-84 313.9 180 91.7
ClCG02G014570 Citrullus lanatus HOM05D008155 ORTHO05D010411 3.8e-67 258.5 164 82.3
Sed0023159 Sechium edule HOM05D008155 ORTHO05D010411 2.6e-52 209.1 173 69.4
Sed0026568 Sechium edule HOM05D008155 ORTHO05D010411 2.3e-32 142.9 130 63.8
Prupe.6G302400 Prunus persica HOM05D008155 ORTHO05D010411 7.3e-18 94.7 138 44.2
QL03p011396 Quercus lobata HOM05D008155 ORTHO05D010411 6.1e-17 91.7 110 50.9
MD12G1197100 Malus domestica HOM05D008155 ORTHO05D010411 3.7e-14 82.4 122 44.3
Haze_15003 Corylus avellana HOM05D008155 ORTHO05D010411 2.4e-13 79.7 158 38.6
Cfa004403 Carpinus fangiana HOM05D008155 ORTHO05D010411 4.1e-13 79.0 165 36.4
arahy.Tifrunner.gnm1.ann1.QRZ24D Arachis hypogaea HOM05D008155 ORTHO05D010411 7.0e-13 78.2 119 46.2
TPR.G35721 Trifolium pratense HOM05D008155 ORTHO05D010411 8.6e-11 71.2 129 38.0
VMungo1383G2435 Vigna mungo HOM05D008155 ORTHO05D010411 1.5e-10 70.5 146 37.7
CSS0011875 Camellia sinensis var. sinensis HOM05D008155 ORTHO05D010411 1.9e-10 70.1 130 40.8
Solyc01g102460.4 Solanum lycopersicum HOM05D008155 ORTHO05D010411 4.3e-10 68.9 163 38.7
MD04G1183800 Malus domestica HOM05D008155 ORTHO05D010411 5.6e-10 68.6 114 36.0
Manes.09G182600 Manihot esculenta HOM05D008155 ORTHO05D010411 7.3e-10 68.2 107 43.0
Sopen01g044900 Solanum pennellii HOM05D008155 ORTHO05D010411 7.3e-10 68.2 159 39.0
Ciclev10029557m.g Citrus clementina HOM05D008155 ORTHO05D010411 9.5e-10 67.8 127 37.8
FAN02G1576 Fragaria x ananassa HOM05D008155 ORTHO05D010411 1.6e-09 67.0 123 40.7
FAN14G4286 Fragaria x ananassa HOM05D008155 ORTHO05D010411 2.1e-09 66.6 123 39.0
RcHm_v2.0_Chr3g0459031 Rosa chinensis HOM05D008155 ORTHO05D010411 2.1e-09 66.6 161 37.9
CSS0018964 Camellia sinensis var. sinensis HOM05D008155 ORTHO05D010411 8.0e-09 64.7 122 37.7
SalBow4G1718 Salvia bowleyana HOM05D008155 ORTHO05D010411 1.1e-08 64.3 131 38.2
SalBow4G2153 Salvia bowleyana HOM05D008155 ORTHO05D010411 1.1e-08 64.3 131 38.2
PGSC0003DMG400018233 Solanum tuberosum HOM05D008155 ORTHO05D010411 1.1e-08 64.3 109 40.4
CANSAT54G1408 Cannabis sativa HOM05D008155 ORTHO05D010411 1.4e-08 63.9 133 39.8
Glyma.19G224100 Glycine max HOM05D008155 ORTHO05D010411 1.8e-08 63.5 145 37.2
Hma1.2p1_0157F.1_g069510 Hydrangea macrophylla HOM05D008155 ORTHO05D010411 4.0e-08 62.4 110 44.5
Phvul.001G221000 Phaseolus vulgaris HOM05D008155 ORTHO05D010411 5.2e-08 62.0 150 34.7
Manes.08G106200 Manihot esculenta HOM05D008155 ORTHO05D010411 6.8e-08 61.6 109 40.4
Glyma.03G227200 Glycine max HOM05D008155 ORTHO05D010411 1.2e-07 60.8 147 37.4
SalBow8G5556 Salvia bowleyana HOM05D008155 ORTHO05D010411 1.2e-07 60.8 68 47.1
Medtr7g111230 Medicago truncatula HOM05D008155 ORTHO05D010411 2.0e-07 60.1 136 33.1
Potri.005G001100 Populus trichocarpa HOM05D008155 ORTHO05D010411 9.8e-07 57.8 112 36.6
Thecc.05G331400 Theobroma cacao HOM05D008155 ORTHO05D010411 9.8e-07 57.8 108 39.8
Migut.N00987 Erythranthe guttata HOM05D008155 ORTHO05D010411 1.3e-06 57.4 64 51.6
Potri.013G000200 Populus trichocarpa HOM05D008155 ORTHO05D010411 2.2e-06 56.6 112 35.7
Gohir.A13G206400 Gossypium hirsutum HOM05D008155 ORTHO05D010411 2.9e-06 56.2 50 60.0
Cpa.g.sc48.233 Carica papaya HOM05D008155 ORTHO05D010411 3.7e-06 55.8 118 36.4
Aa31LG11G10020 Aethionema arabicum HOM05D008255 ORTHO05D011943 8.3e-06 54.7 105 33.3
TAR362G0658 Trochodendron aralioides HOM05D008155 ORTHO05D010411 8.3e-06 54.7 122 36.9


User provided reference genes

Program Settings