Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_2G002210 Cucumis sativus L. HOM05D005593 ORTHO05D006515 0.0e+00 1390.9 723 100.0
MELO3C004562.2 Cucumis melo HOM05D005593 ORTHO05D006515 0.0e+00 1291.9 723 93.1
ClCG11G002410 Citrullus lanatus HOM05D005593 ORTHO05D006515 0.0e+00 1116.3 816 75.4
Sed0018005 Sechium edule HOM05D005593 ORTHO05D006515 1.4e-240 836.6 727 66.3
Sed0026051 Sechium edule HOM05D005593 ORTHO05D006515 2.1e-151 540.4 612 56.0
Prupe.7G233100 Prunus persica HOM05D005593 ORTHO05D006515 3.0e-73 280.8 855 32.6
Dinv41619 Davidia involucrata HOM05D005593 ORTHO05D006515 9.2e-67 259.2 875 31.2
Ciclev10007444m.g Citrus clementina HOM05D005593 ORTHO05D006515 4.7e-63 246.9 671 34.1
Cfa003241 Carpinus fangiana HOM05D005593 ORTHO05D006515 6.2e-63 246.5 655 35.4
Thecc.09G108000 Theobroma cacao HOM05D005593 ORTHO05D006515 9.3e-59 232.6 866 29.8
CiPaw.04G162900 Carya illinoinensis HOM05D005593 ORTHO05D006515 5.1e-57 226.9 658 34.3
Dinv36648 Davidia involucrata HOM05D005593 ORTHO05D006515 1.4e-54 218.8 744 32.3
Duzib150G1551 Durio zibethinus HOM05D005593 ORTHO05D006515 1.8e-54 218.4 567 36.5
Manes.16G114300 Manihot esculenta HOM05D005593 ORTHO05D006515 1.5e-53 215.3 675 32.7
MD15G1182400 Malus domestica HOM05D005593 ORTHO05D006515 3.4e-53 214.2 822 30.7
RcHm_v2.0_Chr2g0090061 Rosa chinensis HOM05D005593 ORTHO05D006515 2.2e-52 211.5 870 30.0
QL02p043456 Quercus lobata HOM05D005593 ORTHO05D006515 2.9e-52 211.1 623 33.7
Gohir.A06G063700 Gossypium hirsutum HOM05D005593 ORTHO05D006515 4.9e-52 210.3 602 33.7
Gorai.010G072700 Gossypium raimondii HOM05D005593 ORTHO05D006515 6.4e-52 209.9 897 28.1
CiPaw.03G229900 Carya illinoinensis HOM05D005593 ORTHO05D006515 7.1e-51 206.5 779 30.3
Gohir.D06G062400 Gossypium hirsutum HOM05D005593 ORTHO05D006515 9.3e-51 206.1 570 33.9
Cpa.g.sc23.90 Carica papaya HOM05D005593 ORTHO05D006515 2.1e-50 204.9 564 33.0
Sabra18G0070100 Salix brachista HOM05D005593 ORTHO05D006515 3.3e-48 197.6 436 37.4
Manes.03G022200 Manihot esculenta HOM05D005593 ORTHO05D006515 4.3e-48 197.2 544 34.7
QL02p044157 Quercus lobata HOM05D005593 ORTHO05D006515 7.4e-48 196.4 653 32.2
Haze_25764 Corylus avellana HOM05D005593 ORTHO05D006515 4.8e-47 193.7 661 32.5
FAN23G2457 Fragaria x ananassa HOM05D005593 ORTHO05D006515 4.8e-47 193.7 652 31.1
FAN26G1119 Fragaria x ananassa HOM05D005593 ORTHO05D006515 1.4e-46 192.2 654 30.3
TWI63G0748 Tripterygium wilfordii HOM05D005593 ORTHO05D006515 3.1e-46 191.0 426 38.0
Oeu064588.2 Olea europaea HOM05D005593 ORTHO05D006515 5.3e-46 190.3 414 37.0
TAR383G0262 Trochodendron aralioides HOM05D005593 ORTHO05D006515 2.0e-45 188.3 888 28.9
TWI34G0806 Tripterygium wilfordii HOM05D005593 ORTHO05D006515 2.6e-45 188.0 577 31.9
FAN28G0021 Fragaria x ananassa HOM05D005593 ORTHO05D006515 7.6e-45 186.4 544 33.5
FAN19G1075 Fragaria x ananassa HOM05D005593 ORTHO05D006515 9.9e-45 186.0 655 31.0
Potri.018G082300 Populus trichocarpa HOM05D005593 ORTHO05D006515 3.8e-44 184.1 464 34.3
Duzib187G0236 Durio zibethinus HOM05D005593 ORTHO05D006515 4.9e-44 183.7 638 32.6
Nitab4.5_0000097g0120 Nicotiana tabacum HOM05D005593 ORTHO05D006515 4.9e-44 183.7 444 36.5
CSS0038657 Camellia sinensis var. sinensis HOM05D005593 ORTHO05D006515 2.4e-43 181.4 887 26.4
Nn3g18070 Nelumbo nucifera HOM05D005593 ORTHO05D006515 6.0e-42 176.8 886 27.1
PGSC0003DMG400015636 Solanum tuberosum HOM05D005593 ORTHO05D006515 6.0e-42 176.8 383 38.4
Dinv11466 Davidia involucrata HOM05D005593 ORTHO05D006515 2.3e-41 174.9 304 42.4
Nitab4.5_0013892g0010 Nicotiana tabacum HOM05D005593 ORTHO05D006515 2.3e-41 174.9 445 35.1
CANSAT56G2752 Cannabis sativa HOM05D005593 ORTHO05D006515 3.0e-41 174.5 898 27.7
CSS0003686 Camellia sinensis var. sinensis HOM05D005593 ORTHO05D006515 1.1e-40 172.6 746 28.7
Psat1g043640 Pisum sativum HOM05D005593 ORTHO05D006515 7.4e-40 169.9 569 31.3
Peaxi162Scf00231g00216 Petunia axillaris HOM05D005593 ORTHO05D006515 2.1e-39 168.3 442 34.2
arahy.Tifrunner.gnm1.ann1.F0KYD5 Arachis hypogaea HOM05D005593 ORTHO05D006515 2.8e-39 167.9 528 31.6
Nn2g11698 Nelumbo nucifera HOM05D005593 ORTHO05D006515 3.7e-39 167.5 425 34.4
Peaxi162Scf00207g01317 Petunia axillaris HOM05D005593 ORTHO05D006515 3.7e-39 167.5 338 37.9
Gorai.001G005900 Gossypium raimondii HOM05D005593 ORTHO05D006515 5.3e-38 163.7 809 27.4
MSTRG.19579 Avicennia marina HOM05D005593 ORTHO05D006515 1.2e-37 162.5 410 35.9
Gohir.D07G006300 Gossypium hirsutum HOM05D005593 ORTHO05D006515 2.6e-37 161.4 809 28.1
Glyma.07G084900 Glycine max HOM05D005593 ORTHO05D006515 4.5e-37 160.6 599 30.4
Ca_25537_v3 Cicer arietinum L. HOM05D005593 ORTHO05D006515 2.9e-36 157.9 589 28.2
TPR.G10037 Trifolium pratense HOM05D005593 ORTHO05D006515 6.5e-36 156.8 548 29.9
Cc06_g09850 Coffea canephora HOM05D005593 ORTHO05D006515 1.1e-35 156.0 548 29.4
DCAR_012067 Daucus carota HOM05D005593 ORTHO05D006515 1.9e-35 155.2 562 30.6
Glyma.09G192000 Glycine max HOM05D005593 ORTHO05D006515 1.9e-35 155.2 591 31.1
Medtr6g087760 Medicago truncatula HOM05D005593 ORTHO05D006515 1.9e-35 155.2 569 30.8
Lalb_Chr22g0352731 Lupinus albus HOM05D005593 ORTHO05D006515 5.5e-35 153.7 740 29.1
Solyc07g032710.4 Solanum lycopersicum HOM05D005593 ORTHO05D006515 1.2e-34 152.5 376 36.7
Lalb_Chr14g0371581 Lupinus albus HOM05D005593 ORTHO05D006515 3.5e-34 151.0 544 29.6
Aqoxy7G01612 Aquilegia oxysepala HOM05D005593 ORTHO05D006515 1.3e-33 149.1 478 31.2
PGR142G3553 Punica granatum HOM05D005593 ORTHO05D006515 5.1e-33 147.1 499 31.3
Sed0013092 Sechium edule HOM05D005593 ORTHO05D006515 5.1e-33 147.1 822 26.5
Sopen07g016890 Solanum pennellii HOM05D005593 ORTHO05D006515 8.7e-33 146.4 427 33.5
Phvul.004G165100 Phaseolus vulgaris HOM05D005593 ORTHO05D006515 1.1e-32 146.0 440 33.9
Lj2g0010013 Lotus japonicus HOM05D005593 ORTHO05D006515 2.2e-31 141.7 578 27.9
Lj7E653T1 Lonicera japonica HOM05D005593 ORTHO05D006515 1.5e-29 135.6 153 50.3
HanXRQChr12g0355541 Helianthus annuus HOM05D000246 ORTHO05D008363 4.5e-29 134.0 536 28.9
VMungo0464G1894 Vigna mungo HOM05D005593 ORTHO05D006515 7.7e-29 133.3 584 28.9
Lsat_1_v5_gn_5_103481 Lactuca sativa HOM05D005593 ORTHO05D006515 1.3e-28 132.5 427 31.4
vmacro20713 Vaccinium macrocarpon HOM05D005593 ORTHO05D006515 1.7e-28 132.1 704 26.1
MELO3C024628.2 Cucumis melo HOM05D005593 ORTHO05D006515 8.5e-28 129.8 801 25.2
Rhsim01G0100000 Rhododendron simsii HOM05D005593 ORTHO05D006515 1.1e-27 129.4 190 45.8
PSO832G1383 Papaver somniferum HOM05D005593 ORTHO05D006515 4.2e-27 127.5 483 29.6
Sc08g0007580 Simmondsia chinensis HOM05D005593 ORTHO05D006515 7.2e-27 126.7 423 32.2
ECA234G4430 Erigeron canadensis HOM05D005593 ORTHO05D006515 1.6e-26 125.6 445 31.0
Peaxi162Scf01363g00023 Petunia axillaris HOM05D005593 ORTHO05D006515 2.1e-26 125.2 585 26.8
PSO782G3244 Papaver somniferum HOM05D005593 ORTHO05D006515 1.8e-25 122.1 471 29.3
Rhsim01G0098000 Rhododendron simsii HOM05D005593 ORTHO05D006515 8.8e-25 119.8 152 44.7
GSVIVG01015371001 Vitis vinifera HOM05D005593 ORTHO05D006515 4.3e-24 117.5 681 26.4
ClCG06G008720 Citrullus lanatus HOM05D005593 ORTHO05D006515 5.3e-22 110.5 581 26.7
EL10Ac8g18455 Beta vulgaris HOM05D005593 ORTHO05D006515 7.7e-21 106.7 510 28.0
ATR0315G161 Amborella trichopoda HOM05D005593 ORTHO05D006515 1.3e-20 105.9 318 34.0
AUR62010967 Chenopodium quinoa HOM05D005593 ORTHO05D006515 3.8e-20 104.4 418 28.7
Ah.14g082180 Amaranthus hybridus HOM05D005593 ORTHO05D006515 5.0e-20 104.0 604 26.7
A07p07590 Brassica napus HOM05D005593 ORTHO05D006515 1.1e-19 102.8 775 23.6
BraA07t28551Z Brassica rapa HOM05D005593 ORTHO05D006515 1.1e-19 102.8 777 23.6
VMungo0251G1265 Vigna mungo HOM05D005593 ORTHO05D006515 2.5e-19 101.7 331 29.3
Aa31sc586G30 Aethionema arabicum HOM05D005593 ORTHO05D006515 4.7e-18 97.4 440 27.0
THA.LOC104804597 Tarenaya hassleriana HOM05D005593 ORTHO05D006515 6.1e-18 97.1 776 24.1
AUR62021477 Chenopodium quinoa HOM05D005593 ORTHO05D006515 7.9e-18 96.7 399 29.1
Glyma.08G037800 Glycine max HOM05D005593 ORTHO05D006515 1.0e-17 96.3 443 26.9
BolC7t41614H Brassica oleracea HOM05D005593 ORTHO05D006515 1.4e-17 95.9 305 31.1
Phvul.002G312500 Phaseolus vulgaris HOM05D005593 ORTHO05D006515 3.0e-17 94.7 596 24.0
SalBow6G5362 Salvia bowleyana HOM05D005593 ORTHO05D006515 3.9e-17 94.4 788 24.1
CsaV3_1G024390 Cucumis sativus L. HOM05D005593 ORTHO05D006515 4.4e-16 90.9 782 24.7
Nitab4.5_0009314g0010 Nicotiana tabacum HOM05D005593 ORTHO05D006515 2.8e-15 88.2 607 25.5
BcaB06g26676 Brassica carinata HOM05D005593 ORTHO05D006515 3.7e-15 87.8 798 23.6
Nitab4.5_0002904g0040 Nicotiana tabacum HOM05D005593 ORTHO05D006515 6.3e-15 87.0 602 25.9
Hund09560 Selenicereus undatus HOM05D005593 ORTHO05D006515 8.2e-15 86.7 381 29.1
PGSC0003DMG400000308 Solanum tuberosum HOM05D005593 ORTHO05D006515 8.2e-15 86.7 418 28.0
Sopen12g003130 Solanum pennellii HOM05D005593 ORTHO05D006515 1.4e-14 85.9 418 27.3
C07p11350 Brassica napus HOM05D005593 ORTHO05D006515 1.8e-14 85.5 784 23.1
BolC7t41613H Brassica oleracea HOM05D005593 ORTHO05D006515 1.8e-14 85.5 785 22.9
BcaC06g35744 Brassica carinata HOM05D005593 ORTHO05D006515 4.1e-14 84.3 784 23.2
Sp3g22410 Schrenkiella parvula HOM05D005593 ORTHO05D006515 1.5e-13 82.4 380 26.3
MBI04_g19171_MAGBIO Magnolia biondii HOM05D005593 ORTHO05D006515 1.0e-12 79.7 190 36.3
Glyma.05G230300 Glycine max HOM05D005593 ORTHO05D006515 1.7e-12 79.0 331 27.5
CARHR100960 Cardamine hirsuta HOM05D005593 ORTHO05D006515 8.5e-12 76.6 783 22.3
Thhalv10002425m.g Eutrema salsugineum HOM05D005593 ORTHO05D006515 4.2e-11 74.3 793 20.8
Actinidia20382 Actinidia chinensis HOM05D005593 ORTHO05D006515 1.6e-10 72.4 194 34.0
AL3G40252 Arabidopsis lyrata HOM05D005593 ORTHO05D006515 1.6e-10 72.4 409 23.5
Cfa005599 Carpinus fangiana HOM05D005593 ORTHO05D006515 1.6e-10 72.4 55 63.6
Rhsim01G0099800 Rhododendron simsii HOM05D005593 ORTHO05D006515 1.6e-10 72.4 346 31.2
Rhsim06G0034200 Rhododendron simsii HOM05D006788 ORTHO05D008265 2.1e-10 72.0 191 31.4
Atru.chr13.488 Acer truncatum HOM05D006788 ORTHO05D008265 4.7e-10 70.9 281 27.4
Aqoxy5G01647 Aquilegia oxysepala HOM05D006788 ORTHO05D008265 4.7e-10 70.9 209 31.6
Cpa.g.sc36.71 Carica papaya HOM05D006788 ORTHO05D008265 4.7e-10 70.9 244 30.3
Carub.0003s2504 Capsella rubella HOM05D005593 ORTHO05D006515 2.3e-09 68.6 802 22.2
Ciclev10018661m.g Citrus clementina HOM05D006788 ORTHO05D008265 5.2e-09 67.4 218 31.2
Thecc.08G025800 Theobroma cacao HOM05D006788 ORTHO05D008265 5.2e-09 67.4 247 27.9
COL.COLO4_26325 Corchorus olitorius HOM05D006788 ORTHO05D008265 8.8e-09 66.6 259 28.6
AT3G24630 Arabidopsis thaliana HOM05D005593 ORTHO05D006515 1.5e-08 65.9 805 21.4
Eucgr.F01564 Eucalyptus grandis HOM05D006788 ORTHO05D008265 1.5e-08 65.9 274 27.0
Dinv39415 Davidia involucrata HOM05D006788 ORTHO05D008265 2.0e-08 65.5 229 27.9
Solyc12g007140.3 Solanum lycopersicum HOM05D005593 ORTHO05D006515 2.0e-08 65.5 300 30.3
Actinidia15324 Actinidia chinensis HOM05D006788 ORTHO05D008265 3.3e-08 64.7 292 26.0
Haze_17976 Corylus avellana HOM05D006788 ORTHO05D008265 5.7e-08 63.9 207 27.5
FvH4_2g39870 Fragaria vesca HOM05D006788 ORTHO05D008265 5.7e-08 63.9 278 27.0
FAN20G0511 Fragaria x ananassa HOM05D006788 ORTHO05D008265 5.7e-08 63.9 278 26.3
Manes.18G027700 Manihot esculenta HOM05D006788 ORTHO05D008265 7.4e-08 63.5 364 26.1
Hund09124 Selenicereus undatus HOM05D005593 ORTHO05D006515 7.4e-08 63.5 383 26.6
Prupe.1G380200 Prunus persica HOM05D006788 ORTHO05D008265 9.7e-08 63.2 257 26.8
Duzib093G0366 Durio zibethinus HOM05D006788 ORTHO05D008265 1.3e-07 62.8 248 27.8
CSS0004157 Camellia sinensis var. sinensis HOM05D006788 ORTHO05D008265 1.7e-07 62.4 218 30.3
CiPaw.15G077700 Carya illinoinensis HOM05D006788 ORTHO05D008265 1.7e-07 62.4 203 28.6
Glyma.08G057300 Glycine max HOM05D006788 ORTHO05D008265 2.8e-07 61.6 277 28.2
Actinidia22550 Actinidia chinensis HOM05D006788 ORTHO05D008265 3.7e-07 61.2 274 27.0
FAN27G2706 Fragaria x ananassa HOM05D006788 ORTHO05D008265 3.7e-07 61.2 264 26.5
Glyma.05G248700 Glycine max HOM05D006788 ORTHO05D008265 3.7e-07 61.2 270 27.0
RcHm_v2.0_Chr5g0052261 Rosa chinensis HOM05D006788 ORTHO05D008265 3.7e-07 61.2 387 23.5
Potri.002G261700 Populus trichocarpa HOM05D006788 ORTHO05D008265 4.8e-07 60.8 367 25.1
Potri.014G185300 Populus trichocarpa HOM05D006788 ORTHO05D008265 4.8e-07 60.8 367 22.3
QL02p008476 Quercus lobata HOM05D006788 ORTHO05D008265 6.3e-07 60.5 200 27.0
Dinv36075 Davidia involucrata HOM05D006788 ORTHO05D008265 8.2e-07 60.1 371 24.0
Gohir.A06G010500 Gossypium hirsutum HOM05D006788 ORTHO05D008265 8.2e-07 60.1 249 28.5
Peaxi162Scf00417g01019 Petunia axillaris HOM05D006788 ORTHO05D008265 8.2e-07 60.1 202 30.7
TWI56G0676 Tripterygium wilfordii HOM05D006788 ORTHO05D008265 1.8e-06 58.9 240 29.2
CSS0005112 Camellia sinensis var. sinensis HOM05D006788 ORTHO05D008265 3.1e-06 58.2 277 28.2
Manes.05G160500 Manihot esculenta HOM05D006788 ORTHO05D008265 3.1e-06 58.2 396 23.5
Ah.09g231030 Amaranthus hybridus HOM05D005593 ORTHO05D006515 5.3e-06 57.4 748 22.2
AUR62007432 Chenopodium quinoa HOM05D006788 ORTHO05D008265 5.3e-06 57.4 251 26.7
MBI16_g34334_MAGBIO Magnolia biondii HOM05D006788 ORTHO05D008265 5.3e-06 57.4 373 25.2
Gohir.D05G197766 Gossypium hirsutum HOM05D006788 ORTHO05D008265 7.0e-06 57.0 78 39.7
Nitab4.5_0009150g0020 Nicotiana tabacum HOM05D006788 ORTHO05D008265 7.0e-06 57.0 303 25.4
HPP92_019509 Vanilla planifolia HOM05D006788 ORTHO05D008265 7.0e-06 57.0 282 25.5


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