Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_1G045040 Cucumis sativus L. HOM05D000780 ORTHO05D009033 3.7e-180 634.8 334 100.0
MELO3C010086.2 Cucumis melo HOM05D000780 ORTHO05D009033 1.3e-135 486.9 267 94.0
ClCG03G011490 Citrullus lanatus HOM05D000780 ORTHO05D009033 6.9e-126 454.5 301 82.4
Thecc.05G266300 Theobroma cacao HOM05D000780 ORTHO05D009033 6.7e-105 384.8 301 68.1
Gohir.A13G161800 Gossypium hirsutum HOM05D000780 ORTHO05D009033 3.3e-104 382.5 302 68.5
Gorai.013G188500 Gossypium raimondii HOM05D000780 ORTHO05D009033 4.4e-104 382.1 302 68.9
Gohir.D13G172200 Gossypium hirsutum HOM05D000780 ORTHO05D009033 5.7e-104 381.7 302 68.9
FvH4_6g01461 Fragaria vesca HOM05D000780 ORTHO05D009033 4.8e-103 378.6 301 68.1
Duzib177G0863 Durio zibethinus HOM05D000780 ORTHO05D009033 8.2e-103 377.9 308 67.2
MD12G1251900 Malus domestica HOM05D000780 ORTHO05D009033 8.2e-103 377.9 309 68.3
Ciclev10021307m.g Citrus clementina HOM05D000780 ORTHO05D009033 2.4e-102 376.3 296 70.3
RcHm_v2.0_Chr3g0449091 Rosa chinensis HOM05D000780 ORTHO05D009033 5.3e-102 375.2 305 68.5
QL01p042200 Quercus lobata HOM05D000780 ORTHO05D009033 1.6e-101 373.6 313 69.6
GSVIVG01026324001 Vitis vinifera HOM05D000780 ORTHO05D009033 1.7e-100 370.2 295 70.2
TAR633G0111 Trochodendron aralioides HOM05D000780 ORTHO05D009033 4.2e-99 365.5 297 67.7
TWI34G1716 Tripterygium wilfordii HOM05D000780 ORTHO05D009033 2.7e-98 362.8 307 65.5
Atru.chr2.1117 Acer truncatum HOM05D000780 ORTHO05D009033 3.6e-98 362.5 307 66.8
MSTRG.27431 Avicennia marina HOM05D000780 ORTHO05D009033 1.0e-97 360.9 303 67.7
CSS0005756 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D009033 3.0e-97 359.4 315 66.7
THA.LOC104821566 Tarenaya hassleriana HOM05D000780 ORTHO05D009033 5.2e-97 358.6 320 63.8
Hma1.2p1_0130F.1_g060510 Hydrangea macrophylla HOM05D000780 ORTHO05D009033 1.5e-96 357.1 313 64.9
Glyma.20G221500 Glycine max HOM05D000780 ORTHO05D009033 2.0e-96 356.7 261 70.9
Potri.019G023700 Populus trichocarpa HOM05D000780 ORTHO05D009033 5.7e-96 355.1 305 67.9
Carub.0007s3248 Capsella rubella HOM05D000780 ORTHO05D009033 9.8e-96 354.4 304 64.5
Manes.09G146600 Manihot esculenta HOM05D000780 ORTHO05D009033 1.3e-95 354.0 301 67.4
EL10Ac4g09771 Beta vulgaris HOM05D000780 ORTHO05D009033 2.2e-95 353.2 297 66.3
BraA04t16719Z Brassica rapa HOM05D000780 ORTHO05D009033 4.8e-95 352.1 312 62.8
Lalb_Chr21g0311301 Lupinus albus HOM05D000780 ORTHO05D009033 2.4e-94 349.7 299 63.5
PGR004G1412 Punica granatum HOM05D000780 ORTHO05D009033 3.1e-94 349.4 303 63.4
AUR62006989 Chenopodium quinoa HOM05D000780 ORTHO05D009033 4.1e-94 349.0 290 65.2
C04p44170 Brassica napus HOM05D000780 ORTHO05D009033 2.7e-93 346.3 307 64.2
Nn1g03021 Nelumbo nucifera HOM05D000780 ORTHO05D009033 2.7e-93 346.3 303 66.0
Lj5g0019051 Lotus japonicus HOM05D000780 ORTHO05D009033 5.9e-93 345.1 307 62.5
BcaC02g09559 Brassica carinata HOM05D000780 ORTHO05D009033 7.7e-93 344.7 307 63.8
A04p10530 Brassica napus HOM05D000780 ORTHO05D009033 7.7e-93 344.7 309 62.5
BolC4t25992H Brassica oleracea HOM05D000780 ORTHO05D009033 7.7e-93 344.7 307 63.8
VMungo0720G1285 Vigna mungo HOM05D000780 ORTHO05D009033 1.3e-92 344.0 293 63.5
Aqoxy5G00106 Aquilegia oxysepala HOM05D000780 ORTHO05D009033 2.2e-92 343.2 298 63.4
AL7G45990 Arabidopsis lyrata HOM05D000780 ORTHO05D009033 2.2e-92 343.2 304 64.5
Phvul.L002032 Phaseolus vulgaris HOM05D000780 ORTHO05D009033 2.2e-92 343.2 260 68.5
Eucgr.H04210 Eucalyptus grandis HOM05D000780 ORTHO05D009033 3.8e-92 342.4 321 61.7
Thhalv10027857m.g Eutrema salsugineum HOM05D000780 ORTHO05D009033 1.9e-91 340.1 308 61.4
Ah.06g187930 Amaranthus hybridus HOM05D000780 ORTHO05D009033 2.5e-91 339.7 263 68.4
arahy.Tifrunner.gnm1.ann1.ZAXM00 Arachis hypogaea HOM05D000780 ORTHO05D009033 3.2e-91 339.3 305 60.7
AT5G37360 Arabidopsis thaliana HOM05D000780 ORTHO05D009033 7.2e-91 338.2 305 63.3
arahy.Tifrunner.gnm1.ann1.09X96J Arachis hypogaea HOM05D000780 ORTHO05D009033 7.2e-91 338.2 305 60.3
Ca_09986_v3 Cicer arietinum L. HOM05D000780 ORTHO05D009033 9.4e-91 337.8 306 61.4
Sp7g05110 Schrenkiella parvula HOM05D000780 ORTHO05D009033 9.4e-91 337.8 306 61.8
Lsat_1_v5_gn_9_46781 Lactuca sativa HOM05D000780 ORTHO05D009033 1.6e-90 337.0 300 64.0
Solyc04g050470.4 Solanum lycopersicum HOM05D000780 ORTHO05D009033 2.7e-90 336.3 304 62.5
Migut.F02052 Erythranthe guttata HOM05D000780 ORTHO05D009033 8.0e-90 334.7 304 63.5
Sc24g0002520 Simmondsia chinensis HOM05D000780 ORTHO05D009033 1.0e-89 334.3 295 64.1
CARHR215730 Cardamine hirsuta HOM05D000780 ORTHO05D009033 2.3e-89 333.2 307 61.9
Nitab4.5_0003148g0030 Nicotiana tabacum HOM05D000780 ORTHO05D009033 3.0e-89 332.8 258 68.2
Aa31LG9G18020 Aethionema arabicum HOM05D000780 ORTHO05D009033 1.5e-88 330.5 309 60.2
Actinidia06831 Actinidia chinensis HOM05D000780 ORTHO05D009033 2.6e-88 329.7 314 62.4
Hund07171 Selenicereus undatus HOM05D000780 ORTHO05D009033 7.5e-88 328.2 298 62.8
FAN05G0905 Fragaria x ananassa HOM05D000780 ORTHO05D001132 1.3e-87 327.4 317 60.3
CANSAT54G0520 Cannabis sativa HOM05D000780 ORTHO05D009033 1.7e-87 327.0 298 62.1
Psat6g142000 Pisum sativum HOM05D000780 ORTHO05D008187 2.8e-87 326.2 303 59.1
FAN14G4937 Fragaria x ananassa HOM05D000780 ORTHO05D001132 4.9e-87 325.5 314 59.2
Rhsim05G0170400 Rhododendron simsii HOM05D000780 ORTHO05D009033 6.3e-87 325.1 322 60.9
Prupe.6G353000 Prunus persica HOM05D000780 ORTHO05D009033 8.3e-87 324.7 310 61.3
FAN02G1432 Fragaria x ananassa HOM05D000780 ORTHO05D009033 1.1e-86 324.3 305 63.3
MBI10_g26046_MAGBIO Magnolia biondii HOM05D000780 ORTHO05D009033 1.1e-86 324.3 278 66.5
FAN14G3828 Fragaria x ananassa HOM05D000780 ORTHO05D001132 5.4e-86 322.0 314 59.9
Medtr1g079763 Medicago truncatula HOM05D000780 ORTHO05D009033 5.4e-86 322.0 260 63.8
Potri.013G050300 Populus trichocarpa HOM05D000780 ORTHO05D009033 1.6e-85 320.5 267 67.0
COL.COLO4_15539 Corchorus olitorius HOM05D000780 ORTHO05D008187 1.7e-84 317.0 213 74.2
ATR0088G058 Amborella trichopoda HOM05D000780 ORTHO05D009033 2.3e-84 316.6 248 66.9
SalBow1G6873 Salvia bowleyana HOM05D000780 ORTHO05D009033 2.9e-84 316.2 302 60.9
Sed0013634 Sechium edule HOM05D000780 ORTHO05D009033 5.0e-84 315.5 321 61.4
PSO210G3904 Papaver somniferum HOM05D000780 ORTHO05D009033 3.3e-83 312.8 313 60.4
DCAR_030971 Daucus carota HOM05D000780 ORTHO05D009033 5.6e-83 312.0 291 63.2
Nitab4.5_0000841g0080 Nicotiana tabacum HOM05D000780 ORTHO05D009033 2.8e-82 309.7 251 66.5
ECA232G3479 Erigeron canadensis HOM05D000780 ORTHO05D009033 8.0e-82 308.1 289 61.6
unitig_37.g12284 Utricularia gibba HOM05D000780 ORTHO05D009033 1.2e-80 304.3 260 65.0
vmacro19978 Vaccinium macrocarpon HOM05D000780 ORTHO05D009033 2.0e-80 303.5 305 58.4
AUR62000636 Chenopodium quinoa HOM05D000780 ORTHO05D008187 2.6e-80 303.1 225 68.9
SGA_v2.0_scaffold329G48830 Striga asiatica HOM05D002740 ORTHO05D003126 7.5e-80 301.6 341 55.4
SalBow1G5981 Salvia bowleyana HOM05D000780 ORTHO05D009033 2.2e-79 300.1 332 56.0
Dinv01155 Davidia involucrata HOM05D000780 ORTHO05D009033 6.4e-79 298.5 224 71.9
Haze_04472 Corylus avellana HOM05D000780 ORTHO05D009033 1.1e-75 287.7 309 58.6
Glyma.10G167600 Glycine max HOM05D000780 ORTHO05D009033 2.5e-75 286.6 320 53.8
CiPaw.07G074400 Carya illinoinensis HOM05D000780 ORTHO05D009033 3.3e-75 286.2 241 68.0
Sabra19G0033700 Salix brachista HOM05D000780 ORTHO05D009033 8.0e-74 281.6 303 58.1
Sabra13G0046100 Salix brachista HOM05D000780 ORTHO05D008187 1.8e-73 280.4 229 67.7
Os02g0815400 Oryza sativa ssp. japonica HOM05D000780 ORTHO05D009033 5.8e-72 275.4 257 58.0
TPR.G10273 Trifolium pratense HOM05D000780 ORTHO05D009033 7.5e-72 275.0 313 52.7
HanXRQChr05g0145151 Helianthus annuus HOM05D000780 ORTHO05D009033 3.7e-71 272.7 254 61.0
Peaxi162Scf00077g00138 Petunia axillaris HOM05D000780 ORTHO05D009033 4.9e-71 272.3 221 68.3
CSS0024577 Camellia sinensis var. sinensis HOM05D000780 ORTHO05D009033 6.4e-71 271.9 249 65.1
Oeu001248.1 Olea europaea HOM05D000780 ORTHO05D008187 3.6e-66 256.1 273 55.7
Zm00001eb258750 Zea mays HOM05D000780 ORTHO05D009033 3.6e-66 256.1 247 56.3
Cpa.g.c33516 Carica papaya HOM05D000780 ORTHO05D009033 2.6e-64 250.0 188 71.8
Eucgr.H04100 Eucalyptus grandis HOM05D000780 ORTHO05D009033 8.1e-58 228.4 219 59.8
AagrBONN_evm.TU.Sc2ySwM_228.3981 Anthoceros agrestis HOM05D000780 ORTHO05D009033 7.3e-51 205.3 231 48.1
MD12G1251000 Malus domestica HOM05D000072 ORTHO05D009033 6.9e-49 198.7 195 60.0
Lj2A46G68 Lonicera japonica HOM05D000780 ORTHO05D009033 3.8e-47 193.0 147 70.7
SMO172G0144 Selaginella moellendorffii HOM05D000780 ORTHO05D009033 4.2e-46 189.5 237 47.3
Pp3c18_1300 Physcomitrium patens HOM05D000780 ORTHO05D009033 7.8e-45 185.3 262 43.1
MD12G1250900 Malus domestica HOM05D000780 ORTHO05D009033 1.8e-41 174.1 162 64.8
Cc09_g03040 Coffea canephora HOM05D000780 ORTHO05D009033 5.4e-38 162.5 151 60.3
CBR_g11120 Chara braunii HOM05D000780 ORTHO05D009033 7.1e-38 162.2 231 42.0
Sopen04g021250 Solanum pennellii HOM05D000780 ORTHO05D009033 1.2e-37 161.4 132 68.9
HPP92_009056 Vanilla planifolia HOM05D001254 ORTHO05D001386 1.8e-36 157.5 193 47.7
FAN09G0636 Fragaria x ananassa HOM05D000780 ORTHO05D001132 1.4e-33 147.9 114 71.1
FAN11G0130 Fragaria x ananassa HOM05D000780 ORTHO05D009033 4.5e-32 142.9 230 42.6
Cc09_g03030 Coffea canephora HOM05D000780 ORTHO05D009033 1.7e-31 141.0 118 67.8
SEGI_21696 Sequoiadendron giganteum HOM05D000780 ORTHO05D009033 3.8e-31 139.8 149 53.0
PGSC0003DMG402028709 Solanum tuberosum HOM05D000780 ORTHO05D009033 3.2e-30 136.7 117 67.5
HPP92_009057 Vanilla planifolia HOM05D000780 ORTHO05D009033 1.0e-28 131.7 123 57.7
Eucgr.H04102 Eucalyptus grandis HOM05D000780 ORTHO05D009033 6.7e-28 129.0 212 42.5
SEGI_05244 Sequoiadendron giganteum HOM05D000780 ORTHO05D009033 3.4e-24 116.7 117 56.4
FAN05G5022 Fragaria x ananassa HOM05D000780 ORTHO05D009033 2.2e-23 114.0 109 62.4
PGSC0003DMG401028709 Solanum tuberosum HOM05D000780 ORTHO05D009033 1.2e-21 108.2 108 56.5
CAN.G4.37 Capsicum annuum HOM05D000780 ORTHO05D009033 7.4e-19 99.0 77 66.2
FAN14G1321 Fragaria x ananassa HOM05D000780 ORTHO05D009033 9.7e-11 72.0 106 48.1
FAN18G1636 Fragaria x ananassa HOM05D000780 ORTHO05D009033 1.2e-08 65.1 60 58.3
FvH4_3g18300 Fragaria vesca HOM05D000780 ORTHO05D196851 4.5e-08 63.2 50 62.0
FAN21G2408 Fragaria x ananassa HOM05D000780 ORTHO05D009033 5.0e-07 59.7 61 55.7


User provided reference genes

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