Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_1G043590 Cucumis sativus L. HOM05D000665 ORTHO05D000140 1.1e-111 406.8 223 100.0
ClCG03G012420 Citrullus lanatus HOM05D000665 ORTHO05D000140 9.6e-39 164.5 137 77.4
Sed0022741 Sechium edule HOM05D000665 ORTHO05D000140 4.8e-30 135.6 157 51.6
Haze_23288 Corylus avellana HOM05D000665 ORTHO05D000140 1.0e-16 91.3 135 42.2
Haze_23291 Corylus avellana HOM05D000665 ORTHO05D000140 1.0e-16 91.3 135 42.2
Dinv29316 Davidia involucrata HOM05D000001 ORTHO05D000003 8.7e-16 88.2 135 40.7
QL01p016365 Quercus lobata HOM05D000665 ORTHO05D000140 1.3e-14 84.3 75 54.7
Thecc.09G253400 Theobroma cacao HOM05D000665 ORTHO05D000140 3.7e-14 82.8 74 54.1
Phvul.006G016600 Phaseolus vulgaris HOM05D000665 ORTHO05D000140 6.9e-13 78.6 159 35.2
Glyma.07G234900 Glycine max HOM05D000665 ORTHO05D000140 9.0e-13 78.2 141 38.3
Cc01_g06590 Coffea canephora HOM05D000665 ORTHO05D000140 1.5e-12 77.4 74 50.0
Ca_02662_v3 Cicer arietinum L. HOM05D000665 ORTHO05D000140 2.6e-12 76.6 75 52.0
TPR.G11842 Trifolium pratense HOM05D000001 ORTHO05D000003 2.6e-12 76.6 75 53.3
Psat2g130400 Pisum sativum HOM05D000665 ORTHO05D000140 7.6e-12 75.1 75 53.3
COL.COLO4_06628 Corchorus olitorius HOM05D000665 ORTHO05D000140 1.0e-11 74.7 74 54.1
Rhsim13G0204800 Rhododendron simsii HOM05D000665 ORTHO05D000140 1.0e-11 74.7 135 36.3
Medtr3g045460 Medicago truncatula HOM05D000665 ORTHO05D000140 1.7e-11 73.9 75 50.7
Lj6g0024114 Lotus japonicus HOM05D000665 ORTHO05D000140 1.1e-10 71.2 143 36.4
VMungo0540G2239 Vigna mungo HOM05D000665 ORTHO05D000140 1.4e-10 70.9 76 51.3
Lalb_Chr15g0080181 Lupinus albus HOM05D000665 ORTHO05D000140 4.2e-10 69.3 135 34.8
Gohir.D05G075500 Gossypium hirsutum HOM05D000665 ORTHO05D000140 1.8e-08 63.9 74 47.3
Gorai.009G076900 Gossypium raimondii HOM05D000665 ORTHO05D000140 2.3e-08 63.5 74 47.3
Nn2g14680 Nelumbo nucifera HOM05D000665 ORTHO05D000140 5.1e-08 62.4 75 41.3
Lj4C833G3 Lonicera japonica HOM05D000665 ORTHO05D000140 4.3e-07 59.3 79 43.0


User provided reference genes

Program Settings