Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_1G040070 Cucumis sativus L. HOM05D006529 ORTHO05D008380 6.0e-103 377.5 185 100.0
ClCG03G015880 Citrullus lanatus HOM05D006529 ORTHO05D008380 1.3e-65 253.4 164 79.3
MELO3C015437.2 Cucumis melo HOM05D006529 ORTHO05D008380 5.3e-59 231.5 164 73.8
Sed0011062 Sechium edule HOM05D006529 ORTHO05D008380 2.1e-55 219.5 166 69.3
CsaV3_UNG050340 Cucumis sativus L. HOM05D006529 ORTHO05D008380 3.2e-48 195.7 91 100.0
Prupe.7G215100 Prunus persica HOM05D006529 ORTHO05D008380 1.8e-46 189.9 163 57.7
MD02G1072300 Malus domestica HOM05D006529 ORTHO05D008380 2.5e-45 186.0 162 55.6
PGR142G1231 Punica granatum HOM05D006529 ORTHO05D008380 2.5e-45 186.0 154 59.1
RcHm_v2.0_Chr2g0092481 Rosa chinensis HOM05D006529 ORTHO05D008380 6.3e-44 181.4 163 55.8
Manes.16G105400 Manihot esculenta HOM05D006529 ORTHO05D008380 8.2e-44 181.0 163 55.2
FvH4_1g06740 Fragaria vesca HOM05D006529 ORTHO05D008380 2.4e-43 179.5 163 52.1
FAN19G1593 Fragaria x ananassa HOM05D006529 ORTHO05D008380 2.4e-43 179.5 163 52.1
FAN23G2505 Fragaria x ananassa HOM05D006529 ORTHO05D008380 2.4e-43 179.5 163 52.1
TAR624G0297 Trochodendron aralioides HOM05D006529 ORTHO05D008380 2.4e-43 179.5 166 52.4
MD15G1202100 Malus domestica HOM05D006529 ORTHO05D008380 4.5e-42 175.3 163 52.8
Cfa003138 Carpinus fangiana HOM05D006529 ORTHO05D008380 7.7e-42 174.5 164 55.5
Lalb_Chr05g0223501 Lupinus albus HOM05D006529 ORTHO05D008380 8.5e-41 171.0 163 54.6
FAN14G0658 Fragaria x ananassa HOM05D006529 ORTHO05D008380 1.1e-40 170.6 162 50.0
CSS0016193 Camellia sinensis var. sinensis HOM05D006529 ORTHO05D008380 5.5e-40 168.3 162 53.7
CiPaw.04G153200 Carya illinoinensis HOM05D006529 ORTHO05D008380 7.2e-40 167.9 163 52.8
Glyma.05G223900 Glycine max HOM05D006529 ORTHO05D008380 1.2e-39 167.2 163 54.0
GSVIVG01015253001 Vitis vinifera HOM05D006529 ORTHO05D008380 2.7e-39 166.0 167 55.7
Glyma.08G031000 Glycine max HOM05D006529 ORTHO05D008380 3.6e-39 165.6 163 52.8
CANSAT56G2962 Cannabis sativa HOM05D006529 ORTHO05D008380 7.9e-39 164.5 158 50.6
TWI63G1011 Tripterygium wilfordii HOM05D006529 ORTHO05D008380 2.3e-38 162.9 165 53.9
Atru.chr7.1518 Acer truncatum HOM05D006529 ORTHO05D008380 3.0e-38 162.5 167 51.5
Dinv42286 Davidia involucrata HOM05D006529 ORTHO05D008380 3.0e-38 162.5 168 50.0
Eucgr.C00932 Eucalyptus grandis HOM05D006529 ORTHO05D008380 3.0e-38 162.5 172 48.8
Lj7C671T1 Lonicera japonica HOM05D006529 ORTHO05D008380 3.0e-38 162.5 167 51.5
Lj4g0018594 Lotus japonicus HOM05D006529 ORTHO05D008380 3.0e-38 162.5 163 54.0
Duzib150G0994 Durio zibethinus HOM05D006529 ORTHO05D008380 6.7e-38 161.4 164 50.0
Nn8g38953 Nelumbo nucifera HOM05D006529 ORTHO05D008380 8.8e-38 161.0 171 48.5
Ca_17386_v3 Cicer arietinum L. HOM05D006529 ORTHO05D008380 1.1e-37 160.6 163 53.4
Gohir.A05G027800 Gossypium hirsutum HOM05D006529 ORTHO05D008380 1.5e-37 160.2 165 49.7
Potri.006G153800 Populus trichocarpa HOM05D006529 ORTHO05D008380 1.5e-37 160.2 166 52.4
Nn6g35394 Nelumbo nucifera HOM05D006529 ORTHO05D008380 2.6e-37 159.5 165 50.3
COL.COLO4_18251 Corchorus olitorius HOM05D006529 ORTHO05D008380 3.3e-37 159.1 177 49.7
THA.LOC104813489 Tarenaya hassleriana HOM05D006529 ORTHO05D008380 3.3e-37 159.1 166 52.4
Medtr8g101990 Medicago truncatula HOM05D006529 ORTHO05D008380 4.4e-37 158.7 164 52.4
Thecc.09G094900 Theobroma cacao HOM05D006529 ORTHO05D008380 1.3e-36 157.1 171 49.7
AUR62000487 Chenopodium quinoa HOM05D006529 ORTHO05D008380 2.2e-36 156.4 167 49.7
Gohir.D05G029600 Gossypium hirsutum HOM05D006529 ORTHO05D008380 2.8e-36 156.0 166 48.2
Gorai.009G029800 Gossypium raimondii HOM05D006529 ORTHO05D008380 2.8e-36 156.0 166 48.2
Thhalv10026289m.g Eutrema salsugineum HOM05D006529 ORTHO05D008380 3.7e-36 155.6 167 49.1
Nitab4.5_0004011g0030 Nicotiana tabacum HOM05D006529 ORTHO05D008380 4.8e-36 155.2 172 51.2
Psat7g019320 Pisum sativum HOM05D006529 ORTHO05D008380 4.8e-36 155.2 164 52.4
AL7G26720 Arabidopsis lyrata HOM05D006529 ORTHO05D008380 6.3e-36 154.8 167 50.9
Hund07265 Selenicereus undatus HOM05D006529 ORTHO05D008380 6.3e-36 154.8 168 49.4
VMungo0251G0255 Vigna mungo HOM05D006529 ORTHO05D008380 6.3e-36 154.8 163 50.3
arahy.Tifrunner.gnm1.ann1.YG2MQU Arachis hypogaea HOM05D006529 ORTHO05D008380 8.2e-36 154.5 163 47.9
Carub.0007s1471 Capsella rubella HOM05D006529 ORTHO05D008380 8.2e-36 154.5 167 50.3
CARHR233790 Cardamine hirsuta HOM05D006529 ORTHO05D008380 1.4e-35 153.7 167 49.7
AUR62006831 Chenopodium quinoa HOM05D006529 ORTHO05D008380 1.4e-35 153.7 167 49.1
Sp7g24240 Schrenkiella parvula HOM05D006529 ORTHO05D008380 1.4e-35 153.7 168 49.4
Ciclev10009577m.g Citrus clementina HOM05D006529 ORTHO05D008380 1.8e-35 153.3 164 51.8
QL02p063543 Quercus lobata HOM05D006529 ORTHO05D008380 2.4e-35 152.9 205 43.4
AT4G26240 Arabidopsis thaliana HOM05D006529 ORTHO05D008380 4.1e-35 152.1 167 49.1
arahy.Tifrunner.gnm1.ann1.HB8I5Y Arachis hypogaea HOM05D006529 ORTHO05D008380 5.3e-35 151.8 163 47.2
A03p56550 Brassica napus HOM05D006529 ORTHO05D008380 6.9e-35 151.4 170 48.8
CAN.G142.8 Capsicum annuum HOM05D006529 ORTHO05D008380 4.5e-34 148.7 168 50.0
Ah.06g190810 Amaranthus hybridus HOM05D006529 ORTHO05D008380 5.9e-34 148.3 163 49.1
Cc06_g10920 Coffea canephora HOM05D006529 ORTHO05D008380 7.7e-34 147.9 165 50.9
Actinidia29893 Actinidia chinensis HOM05D006529 ORTHO05D008380 1.0e-33 147.5 168 50.0
vmacro06269 Vaccinium macrocarpon HOM05D006529 ORTHO05D008380 1.7e-33 146.7 172 50.0
ECA240G3812 Erigeron canadensis HOM05D006529 ORTHO05D008380 2.2e-33 146.4 151 49.7
Aa31LG3G600 Aethionema arabicum HOM05D006529 ORTHO05D008380 3.8e-33 145.6 181 45.9
Dinv36729 Davidia involucrata HOM05D006529 ORTHO05D008380 3.8e-33 145.6 172 45.9
Phvul.002G305700 Phaseolus vulgaris HOM05D006529 ORTHO05D008380 3.8e-33 145.6 163 50.9
BcaC06g32765 Brassica carinata HOM05D006529 ORTHO05D008380 5.0e-33 145.2 171 48.0
BraA03t14725Z Brassica rapa HOM05D006529 ORTHO05D008380 8.5e-33 144.4 171 47.4
SGA_v2.0_scaffold210G42089 Striga asiatica HOM05D006529 ORTHO05D008380 8.5e-33 144.4 167 50.3
C07p54750 Brassica napus HOM05D006529 ORTHO05D008380 1.1e-32 144.1 170 47.6
BolC7t45964H Brassica oleracea HOM05D006529 ORTHO05D008380 1.1e-32 144.1 170 47.6
Haze_25864 Corylus avellana HOM05D006529 ORTHO05D008380 2.1e-31 139.8 164 47.6
CDE05G3131 Ceratophyllum demersum HOM05D006529 ORTHO05D008380 7.9e-31 137.9 164 45.7
Sc18g0001790 Simmondsia chinensis HOM05D006529 ORTHO05D008380 7.9e-31 137.9 163 47.9
DCAR_012008 Daucus carota HOM05D006529 ORTHO05D008380 3.9e-30 135.6 151 46.4
HanXRQChr09g0238511 Helianthus annuus HOM05D006529 ORTHO05D008380 1.5e-29 133.7 151 45.0
Aqoxy199s004 Aquilegia oxysepala HOM05D006529 ORTHO05D008380 4.4e-29 132.1 162 42.6
Aqoxy7G01329 Aquilegia oxysepala HOM05D006529 ORTHO05D008380 4.4e-29 132.1 162 42.6
MSTRG.10586 Avicennia marina HOM05D006529 ORTHO05D008380 1.3e-28 130.6 167 47.9
PSO063G6648 Papaver somniferum HOM05D006529 ORTHO05D008380 4.8e-28 128.6 164 45.7
CSS0046887 Camellia sinensis var. sinensis HOM05D006529 ORTHO05D008380 1.1e-27 127.5 151 49.0
PSO832G0687 Papaver somniferum HOM05D006529 ORTHO05D008380 1.1e-27 127.5 164 45.1
Migut.K00572 Erythranthe guttata HOM05D006529 ORTHO05D008380 1.4e-27 127.1 149 50.3
Oeu052123.2 Olea europaea HOM05D006529 ORTHO05D008380 1.8e-27 126.7 189 42.3
SalBow1G6632 Salvia bowleyana HOM05D006529 ORTHO05D008380 5.3e-27 125.2 191 42.4
CANSAT56G3512 Cannabis sativa HOM05D006529 ORTHO05D008380 1.3e-25 120.6 158 40.5
Zm00001eb356780 Zea mays HOM05D006529 ORTHO05D008380 1.7e-25 120.2 137 45.3
TPR.G17281 Trifolium pratense HOM05D006529 ORTHO05D008380 2.9e-25 119.4 85 60.0
Os01g0559300 Oryza sativa ssp. japonica HOM05D006529 ORTHO05D008380 3.8e-25 119.0 137 47.4
Lsat_1_v5_gn_7_38121 Lactuca sativa HOM05D006529 ORTHO05D008380 1.9e-24 116.7 152 42.1
FAN26G1500 Fragaria x ananassa HOM05D006529 ORTHO05D008380 4.0e-22 109.0 167 41.9
SHI02792 Sapria himalayana HOM05D006529 ORTHO05D008380 1.5e-21 107.1 127 43.3
Sabra06G0122000 Salix brachista HOM05D006529 ORTHO05D008380 6.3e-20 101.7 117 53.0
Cpa.g.sc78.59 Carica papaya HOM05D006529 ORTHO05D008380 2.4e-19 99.8 169 40.2
Peaxi162Scf00883g01013 Petunia axillaris HOM05D006529 ORTHO05D008380 2.4e-19 99.8 173 38.2
FAN27G1398 Fragaria x ananassa HOM05D006529 ORTHO05D008380 8.0e-15 84.7 102 45.1
Nitab4.5_0009098g0020 Nicotiana tabacum HOM05D006529 ORTHO05D008380 4.8e-12 75.5 108 47.2
SalBow1G6389 Salvia bowleyana HOM05D006529 ORTHO05D008380 2.7e-10 69.7 80 43.8
SMO164G0011 Selaginella moellendorffii HOM05D006529 ORTHO05D008380 4.5e-10 68.9 127 30.7
FAN26G3434 Fragaria x ananassa HOM05D006529 ORTHO05D008380 7.7e-10 68.2 52 50.0
FAN02G1845 Fragaria x ananassa HOM05D000599 ORTHO05D000554 5.5e-08 62.0 104 41.3
PGSC0003DMG400015618 Solanum tuberosum HOM05D006529 ORTHO05D008380 2.1e-07 60.1 211 30.8
HPP92_005506 Vanilla planifolia HOM05D006529 ORTHO05D008380 2.3e-06 56.6 49 46.9
RcHm_v2.0_Chr7g0226351 Rosa chinensis HOM05D006529 ORTHO05D008380 5.2e-06 55.5 69 44.9
HanXRQChr03g0061021 Helianthus annuus HOM05D006529 ORTHO05D008380 6.8e-06 55.1 52 46.2


User provided reference genes

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