Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_1G038770 Cucumis sativus L. HOM05D004955 ORTHO05D005965 0.0e+00 1101.3 563 100.0
MELO3C015301.2 Cucumis melo HOM05D004955 ORTHO05D005965 4.8e-305 1050.4 563 95.4
ClCG03G017340 Citrullus lanatus HOM05D004955 ORTHO05D005965 3.7e-265 917.9 563 83.7
Sed0006321 Sechium edule HOM05D004955 ORTHO05D005965 2.0e-263 912.1 564 82.4
QL12p007112 Quercus lobata HOM05D004955 ORTHO05D005965 9.0e-235 817.0 563 74.6
MD06G1040100 Malus domestica HOM05D004955 ORTHO05D005965 2.0e-234 815.8 563 74.4
FvH4_5g21180 Fragaria vesca HOM05D004955 ORTHO05D005965 2.2e-233 812.4 561 73.8
Prupe.5G046300 Prunus persica HOM05D004955 ORTHO05D005965 6.4e-233 810.8 562 74.0
RcHm_v2.0_Chr7g0208321 Rosa chinensis HOM05D004955 ORTHO05D005965 1.1e-232 810.1 562 73.7
FAN08G3652 Fragaria x ananassa HOM05D004955 ORTHO05D005965 4.6e-231 804.7 563 74.1
FAN18G2324 Fragaria x ananassa HOM05D004955 ORTHO05D005965 1.3e-230 803.1 580 71.6
Dinv28916 Davidia involucrata HOM05D004955 ORTHO05D005965 4.3e-229 798.1 563 72.6
Duzib213G0438 Durio zibethinus HOM05D004955 ORTHO05D005965 2.8e-228 795.4 562 71.9
Potri.001G146900 Populus trichocarpa HOM05D004955 ORTHO05D005965 2.8e-228 795.4 564 71.8
COL.COLO4_17563 Corchorus olitorius HOM05D004955 ORTHO05D005965 1.1e-227 793.5 562 71.0
GSVIVG01013229001 Vitis vinifera HOM05D004955 ORTHO05D005965 4.0e-227 791.6 565 72.2
Thecc.07G110200 Theobroma cacao HOM05D004955 ORTHO05D005965 9.9e-226 786.9 562 71.2
TWI81G0724 Tripterygium wilfordii HOM05D004955 ORTHO05D005965 2.2e-225 785.8 564 71.3
Sabra01G0115600 Salix brachista HOM05D004955 ORTHO05D005965 3.8e-225 785.0 564 71.5
TAR375G0042 Trochodendron aralioides HOM05D004955 ORTHO05D005965 6.4e-225 784.3 562 72.2
CiPaw.12G060300 Carya illinoinensis HOM05D004955 ORTHO05D005965 3.2e-224 781.9 562 72.8
GSVIVG01011242001 Vitis vinifera HOM05D004955 ORTHO05D005965 4.2e-224 781.6 565 71.3
FAN13G2236 Fragaria x ananassa HOM05D004955 ORTHO05D005965 5.4e-224 781.2 582 70.4
arahy.Tifrunner.gnm1.ann1.JVPY2N Arachis hypogaea HOM05D004955 ORTHO05D005965 7.1e-224 780.8 557 71.1
arahy.Tifrunner.gnm1.ann1.U6D9EY Arachis hypogaea HOM05D004955 ORTHO05D005965 7.1e-224 780.8 557 71.1
VMungo1215G2917 Vigna mungo HOM05D004955 ORTHO05D005965 1.6e-223 779.6 561 70.6
Gohir.A01G044000 Gossypium hirsutum HOM05D004955 ORTHO05D005965 2.1e-223 779.2 562 70.3
Gorai.002G043000 Gossypium raimondii HOM05D004955 ORTHO05D005965 4.6e-223 778.1 562 70.5
Gohir.D01G034800 Gossypium hirsutum HOM05D004955 ORTHO05D005965 6.0e-223 777.7 562 70.5
CSS0030337 Camellia sinensis var. sinensis HOM05D004955 ORTHO05D005965 1.1e-221 773.5 563 69.6
CSS0027312 Camellia sinensis var. sinensis HOM05D004955 ORTHO05D005965 1.5e-221 773.1 563 69.6
Ca_24631_v3 Cicer arietinum L. HOM05D004955 ORTHO05D005965 1.9e-221 772.7 561 70.6
FAN04G2254 Fragaria x ananassa HOM05D004955 ORTHO05D005965 5.6e-221 771.2 561 71.7
Nn1g00613 Nelumbo nucifera HOM05D004955 ORTHO05D005965 2.1e-220 769.2 561 70.9
Psat2g174720 Pisum sativum HOM05D004955 ORTHO05D005965 2.1e-220 769.2 561 69.9
Rhsim09G0128800 Rhododendron simsii HOM05D004955 ORTHO05D005965 8.1e-220 767.3 562 70.3
Ciclev10031124m.g Citrus clementina HOM05D004955 ORTHO05D005965 1.1e-219 766.9 561 69.7
Eucgr.D02153 Eucalyptus grandis HOM05D004955 ORTHO05D005965 1.4e-219 766.5 560 71.4
PGR031G1993 Punica granatum HOM05D004955 ORTHO05D005965 2.4e-219 765.8 561 69.2
Lj2g0012431 Lotus japonicus HOM05D004955 ORTHO05D005965 3.1e-219 765.4 557 69.8
Cpa.g.sc39.114 Carica papaya HOM05D004955 ORTHO05D005965 4.0e-219 765.0 564 69.7
vmacro21668 Vaccinium macrocarpon HOM05D004955 ORTHO05D005965 9.0e-219 763.8 564 70.6
DCAR_005602 Daucus carota HOM05D004955 ORTHO05D005965 1.2e-218 763.5 558 69.9
Sopen08g025850 Solanum pennellii HOM05D004955 ORTHO05D005965 2.0e-218 762.7 562 69.0
Nitab4.5_0002055g0140 Nicotiana tabacum HOM05D004955 ORTHO05D005965 1.7e-217 759.6 562 69.0
Lj3A396G10 Lonicera japonica HOM05D004955 ORTHO05D005965 2.9e-217 758.8 565 68.8
Glyma.20G095000 Glycine max HOM05D004955 ORTHO05D005965 4.9e-217 758.1 561 69.9
Solyc08g077270.4 Solanum lycopersicum HOM05D004955 ORTHO05D005965 1.9e-216 756.1 562 68.5
Phvul.002G003600 Phaseolus vulgaris HOM05D004955 ORTHO05D005965 2.5e-216 755.7 561 69.2
Atru.BG.31.p Acer truncatum HOM05D004955 ORTHO05D005965 5.5e-216 754.6 537 71.1
EL10Ac5g12196 Beta vulgaris HOM05D004955 ORTHO05D005965 5.5e-216 754.6 564 67.7
CAN.G799.17 Capsicum annuum HOM05D004955 ORTHO05D005965 7.1e-216 754.2 562 68.0
MBI04_g44837_MAGBIO Magnolia biondii HOM05D004955 ORTHO05D005965 7.1e-216 754.2 581 68.7
Medtr5g013970 Medicago truncatula HOM05D004955 ORTHO05D005965 2.7e-215 752.3 558 69.5
MD16G1269200 Malus domestica HOM05D004955 ORTHO05D005965 1.0e-214 750.4 570 69.8
Glyma.07G096600 Glycine max HOM05D004955 ORTHO05D005965 1.9e-213 746.1 563 69.1
Cc05_g03300 Coffea canephora HOM05D004955 ORTHO05D005965 2.8e-212 742.3 561 68.4
MSTRG.1970 Avicennia marina HOM05D004955 ORTHO05D005965 3.1e-211 738.8 563 68.6
Peaxi162Scf00084g00922 Petunia axillaris HOM05D004955 ORTHO05D005965 3.1e-211 738.8 589 64.9
CANSAT80G1132 Cannabis sativa HOM05D004955 ORTHO05D005965 4.0e-211 738.4 564 67.6
Aqoxy3G03106 Aquilegia oxysepala HOM05D004955 ORTHO05D005965 5.3e-211 738.0 588 65.6
THA.LOC104814429 Tarenaya hassleriana HOM05D004955 ORTHO05D005965 5.3e-211 738.0 558 68.3
PSO541G5086 Papaver somniferum HOM05D004955 ORTHO05D005965 2.0e-210 736.1 562 68.5
Hund14430 Selenicereus undatus HOM05D004955 ORTHO05D005965 2.0e-210 736.1 572 67.3
PSO063G1154 Papaver somniferum HOM05D004955 ORTHO05D005965 7.6e-210 734.2 562 68.0
PSO017G5366 Papaver somniferum HOM05D004955 ORTHO05D005965 1.0e-209 733.8 562 68.0
Haze_07894 Corylus avellana HOM05D004955 ORTHO05D005965 1.3e-209 733.4 563 68.7
SalBow6G1446 Salvia bowleyana HOM05D004955 ORTHO05D005965 1.1e-208 730.3 560 66.1
Migut.E00912 Erythranthe guttata HOM05D004955 ORTHO05D005965 1.4e-208 729.9 556 68.2
vmacro00352 Vaccinium macrocarpon HOM05D004955 ORTHO05D005965 1.4e-208 729.9 544 70.2
Migut.E00798 Erythranthe guttata HOM05D004955 ORTHO05D005965 2.5e-208 729.2 556 68.2
Aa31LG9G15390 Aethionema arabicum HOM05D004955 ORTHO05D005965 5.5e-208 728.0 565 66.4
Sc07g0008830 Simmondsia chinensis HOM05D004955 ORTHO05D005965 7.1e-208 727.6 564 65.6
AUR62007230 Chenopodium quinoa HOM05D004955 ORTHO05D005965 9.3e-208 727.2 568 66.9
AUR62018770 Chenopodium quinoa HOM05D004955 ORTHO05D005965 2.7e-207 725.7 564 66.8
ATR0829G014 Amborella trichopoda HOM05D004955 ORTHO05D005965 3.5e-207 725.3 560 65.7
Lsat_1_v5_gn_6_66461 Lactuca sativa HOM05D004955 ORTHO05D005965 1.3e-206 723.4 566 67.3
MBI04_g29834_MAGBIO Magnolia biondii HOM05D004955 ORTHO05D005965 1.3e-206 723.4 571 67.6
Manes.15G172800 Manihot esculenta HOM05D004955 ORTHO05D005965 4.3e-205 718.4 511 70.6
Thhalv10013080m.g Eutrema salsugineum HOM05D004955 ORTHO05D005965 1.6e-204 716.5 562 67.3
AUR62001104 Chenopodium quinoa HOM05D004955 ORTHO05D005965 1.8e-203 713.0 570 66.1
HanXRQChr14g0455871 Helianthus annuus HOM05D004955 ORTHO05D005965 2.4e-203 712.6 539 67.9
AL6G29260 Arabidopsis lyrata HOM05D004955 ORTHO05D005965 9.0e-203 710.7 560 67.1
Oeu039341.2 Olea europaea HOM05D004955 ORTHO05D005965 3.4e-202 708.8 588 63.4
Carub.0006s1636 Capsella rubella HOM05D004955 ORTHO05D005965 5.0e-201 704.9 562 66.5
HPP92_017500 Vanilla planifolia HOM05D004955 ORTHO05D005965 1.1e-200 703.7 561 64.9
AT5G18070 Arabidopsis thaliana HOM05D004955 ORTHO05D005965 3.2e-200 702.2 560 65.7
Sp6g26230 Schrenkiella parvula HOM05D004955 ORTHO05D005965 3.2e-200 702.2 562 66.2
CARHR195050 Cardamine hirsuta HOM05D004955 ORTHO05D005965 7.2e-200 701.0 560 66.6
Nitab4.5_0006693g0050 Nicotiana tabacum HOM05D004955 ORTHO05D005965 7.9e-199 697.6 520 69.2
ECA233G2813 Erigeron canadensis HOM05D004955 ORTHO05D005965 3.0e-198 695.7 565 64.2
C09p58920 Brassica napus HOM05D004955 ORTHO05D005965 3.9e-198 695.3 559 64.6
Actinidia25945 Actinidia chinensis HOM05D004955 ORTHO05D005965 9.7e-197 690.6 562 64.8
Lalb_Chr16g0379231 Lupinus albus HOM05D004955 ORTHO05D005965 1.1e-195 687.2 499 70.9
BolC9t58736H Brassica oleracea HOM05D004955 ORTHO05D005965 1.8e-195 686.4 559 64.0
BraA10t44206Z Brassica rapa HOM05D004955 ORTHO05D005965 1.8e-195 686.4 559 63.1
BcaC04g18728 Brassica carinata HOM05D004955 ORTHO05D005965 1.2e-194 683.7 559 63.9
A10p21440 Brassica napus HOM05D004955 ORTHO05D005965 5.9e-194 681.4 560 63.4
PGSC0003DMG400024224 Solanum tuberosum HOM05D004955 ORTHO05D005965 7.2e-192 674.5 500 68.8
C03p10070 Brassica napus HOM05D004955 ORTHO05D005965 4.7e-191 671.8 559 63.0
Os07g0195400 Oryza sativa ssp. japonica HOM05D004955 ORTHO05D005965 7.9e-191 671.0 538 62.1
A03p08630 Brassica napus HOM05D004955 ORTHO05D005965 3.9e-190 668.7 558 63.3
BraA03t10187Z Brassica rapa HOM05D004955 ORTHO05D005965 1.1e-189 667.2 559 62.4
BcaB01g05173 Brassica carinata HOM05D004955 ORTHO05D005965 4.4e-189 665.2 560 62.7
BolC3t13493H Brassica oleracea HOM05D004955 ORTHO05D005965 4.4e-189 665.2 560 62.7
SEGI_00537 Sequoiadendron giganteum HOM05D004955 ORTHO05D005965 1.3e-188 663.7 560 62.5
CSS0006893 Camellia sinensis var. sinensis HOM05D004955 ORTHO05D005965 6.3e-188 661.4 499 67.9
SGA_v2.0_scaffold18G08384 Striga asiatica HOM05D004955 ORTHO05D005965 2.6e-181 639.4 498 67.5
Zm00001eb119880 Zea mays HOM05D004955 ORTHO05D005965 2.2e-180 636.3 555 59.8
unitig_21.g20378 Utricularia gibba HOM05D004955 ORTHO05D005965 3.0e-174 615.9 546 61.0
Haze_08303 Corylus avellana HOM05D004955 ORTHO05D005965 2.9e-169 599.4 429 72.5
BcaB08g36711 Brassica carinata HOM05D004955 ORTHO05D005965 9.4e-168 594.3 562 58.7
Haze_08299 Corylus avellana HOM05D004955 ORTHO05D005965 2.8e-159 566.2 510 60.2
SHI01417 Sapria himalayana HOM05D004955 ORTHO05D005965 8.9e-158 561.2 450 66.0
Pp3c15_140 Physcomitrium patens HOM05D004955 ORTHO05D005965 7.0e-155 551.6 570 52.8
AagrBONN_evm.TU.Sc2ySwM_362.507 Anthoceros agrestis HOM05D004955 ORTHO05D005965 5.2e-150 535.4 556 52.5
Mapoly0074s0077 Marchantia polymorpha HOM05D004955 ORTHO05D005965 6.4e-148 528.5 565 52.2
SMO174G0171 Selaginella moellendorffii HOM05D004955 ORTHO05D005965 5.6e-144 515.4 544 52.8
CDE08G0647 Ceratophyllum demersum HOM05D004955 ORTHO05D005965 9.5e-144 514.6 403 64.5
CBR_g36832 Chara braunii HOM05D004955 ORTHO05D005965 6.8e-142 508.4 572 49.7
Atru.chr6.1775 Acer truncatum HOM05D004955 ORTHO05D005965 4.4e-141 505.8 356 72.5
Dinv25184 Davidia involucrata HOM05D004955 ORTHO05D005965 2.2e-140 503.4 404 66.6
SGA_v2.0_scaffold157G37418 Striga asiatica HOM05D004955 ORTHO05D005965 1.3e-137 494.2 458 57.9
Haze_08304 Corylus avellana HOM05D004955 ORTHO05D005965 4.0e-118 429.5 409 59.2
Glyma.01G201400 Glycine max HOM05D004955 ORTHO05D005965 2.1e-114 417.2 298 73.5
PRCOL_00000375 Prasinoderma coloniale HOM05D004955 ORTHO05D005965 4.6e-114 416.0 542 47.4
MCO08G085 Micromonas commoda HOM05D004955 ORTHO05D005965 8.1e-111 405.2 589 41.9
Cre08.g379700 Chlamydomonas reinhardtii HOM05D004955 ORTHO05D005965 7.9e-106 388.7 548 44.5
TPR.G6765 Trifolium pratense HOM05D004955 ORTHO05D005965 1.0e-105 388.3 571 43.8
Nn3g19414 Nelumbo nucifera HOM05D004955 ORTHO05D005965 1.0e-100 371.7 283 66.8
Glyma.16G093333 Glycine max HOM05D004955 ORTHO05D005965 2.4e-70 270.8 200 69.5
Actinidia03393 Actinidia chinensis HOM05D004955 ORTHO05D005965 4.0e-65 253.4 489 37.0
MD09G1284100 Malus domestica HOM05D004955 ORTHO05D005965 4.0e-57 226.9 377 42.4
Haze_26496 Corylus avellana HOM05D004955 ORTHO05D005965 2.9e-52 210.7 283 43.1
Glyma.16G093267 Glycine max HOM05D004955 ORTHO05D005965 2.9e-44 184.1 142 66.2
SEGI_27182 Sequoiadendron giganteum HOM05D004955 ORTHO05D005965 2.8e-42 177.6 294 40.5
Glyma.01G201300 Glycine max HOM05D004955 ORTHO05D005965 1.8e-41 174.9 142 64.8
BcaB01g01790 Brassica carinata HOM05D004955 ORTHO05D005965 7.5e-40 169.5 175 51.4
Cc05_g03290 Coffea canephora HOM05D004955 ORTHO05D005965 7.8e-37 159.5 110 70.0
Haze_08302 Corylus avellana HOM05D004955 ORTHO05D005965 7.8e-37 159.5 192 51.6
SHI01420 Sapria himalayana HOM05D004955 ORTHO05D000023 4.4e-32 143.7 112 63.4
BcaB01g06395 Brassica carinata HOM05D004955 ORTHO05D005965 3.7e-31 140.6 98 69.4
vmacro21667 Vaccinium macrocarpon HOM05D004955 ORTHO05D005965 2.0e-29 134.8 134 58.2
SEGI_19301 Sequoiadendron giganteum HOM05D005396 ORTHO05D006400 1.1e-25 122.5 139 51.8
CARHR185470 Cardamine hirsuta HOM05D004955 ORTHO05D005965 2.7e-21 107.8 85 64.7
Ah.04g153990 Amaranthus hybridus HOM05D004955 ORTHO05D005965 4.7e-18 97.1 207 32.9
Glyma.16G093100 Glycine max HOM05D004955 ORTHO05D005965 8.1e-18 96.3 77 59.7
Haze_08300 Corylus avellana HOM05D004955 ORTHO05D005965 1.3e-15 89.0 88 56.8
SEGI_05540 Sequoiadendron giganteum HOM05D004955 ORTHO05D005965 4.9e-15 87.0 73 64.4
ATR0149G020 Amborella trichopoda HOM05D004955 ORTHO05D005965 3.2e-14 84.3 87 52.9


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