Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_1G032120 Cucumis sativus L. HOM05D008207 ORTHO05D010373 1.1e-217 759.6 367 100.0
ClCG06G013910 Citrullus lanatus HOM05D008207 ORTHO05D010373 6.8e-183 644.0 387 82.4
MELO3C017404.2 Cucumis melo HOM05D008207 ORTHO05D010373 7.3e-161 570.9 284 95.4
Sed0019966 Sechium edule HOM05D008207 ORTHO05D010373 2.6e-150 535.8 379 71.8
FAN17G2040 Fragaria x ananassa HOM05D008207 ORTHO05D010373 1.4e-119 433.7 317 66.9
RcHm_v2.0_Chr4g0398551 Rosa chinensis HOM05D008207 ORTHO05D010373 9.0e-119 431.0 348 62.6
CiPaw.07G200900 Carya illinoinensis HOM05D008207 ORTHO05D010373 2.2e-117 426.4 285 69.5
Glyma.13G103300 Glycine max HOM05D008207 ORTHO05D010373 1.1e-116 424.1 277 72.2
VMungo1215G1326 Vigna mungo HOM05D008207 ORTHO05D010373 4.6e-115 418.7 277 71.8
GSVIVG01029258001 Vitis vinifera HOM05D008207 ORTHO05D010373 7.9e-115 417.9 283 71.4
FAN22G1797 Fragaria x ananassa HOM05D008207 ORTHO05D010373 6.7e-114 414.8 335 62.7
arahy.Tifrunner.gnm1.ann1.PC6R8Z Arachis hypogaea HOM05D008207 ORTHO05D010373 3.7e-112 409.1 274 70.1
Phvul.003G137466 Phaseolus vulgaris HOM05D008207 ORTHO05D010373 4.8e-112 408.7 277 71.1
FAN07G0484 Fragaria x ananassa HOM05D008207 ORTHO05D010373 8.2e-112 407.9 310 64.8
Dinv41210 Davidia involucrata HOM05D008207 ORTHO05D010373 1.2e-110 404.1 283 67.8
TAR625G1057 Trochodendron aralioides HOM05D008207 ORTHO05D010373 2.6e-110 402.9 286 68.2
arahy.Tifrunner.gnm1.ann1.7T8Q8E Arachis hypogaea HOM05D008207 ORTHO05D010373 2.2e-109 399.8 289 66.4
Ca_21275_v3 Cicer arietinum L. HOM05D008207 ORTHO05D010373 1.1e-108 397.5 280 68.9
Medtr4g126910 Medicago truncatula HOM05D008207 ORTHO05D010373 1.9e-108 396.7 281 69.4
TPR.G5411 Trifolium pratense HOM05D008207 ORTHO05D010373 7.2e-108 394.8 272 70.2
Hma1.2p1_0235F.1_g099000 Hydrangea macrophylla HOM05D008207 ORTHO05D010373 9.3e-108 394.4 281 68.0
CSS0025795 Camellia sinensis var. sinensis HOM05D008207 ORTHO05D010373 3.6e-107 392.5 276 67.4
Prupe.1G068900 Prunus persica HOM05D008207 ORTHO05D010373 1.6e-104 383.6 246 72.8
Aqoxy7G02948 Aquilegia oxysepala HOM05D008207 ORTHO05D010373 2.2e-104 383.3 280 65.4
Lalb_Chr12g0199751 Lupinus albus HOM05D008207 ORTHO05D010373 6.3e-104 381.7 290 66.9
AUR62033242 Chenopodium quinoa HOM05D008207 ORTHO05D010373 1.4e-103 380.6 290 64.8
Lj4g0004064 Lotus japonicus HOM05D008207 ORTHO05D010373 1.8e-103 380.2 293 65.2
Eucgr.C00072 Eucalyptus grandis HOM05D008207 ORTHO05D010373 1.5e-102 377.1 259 68.0
Hund26321 Selenicereus undatus HOM05D008207 ORTHO05D010373 4.5e-102 375.6 281 65.8
MBI14_g19451_MAGBIO Magnolia biondii HOM05D008207 ORTHO05D010373 7.7e-102 374.8 281 65.8
FAN12G1624 Fragaria x ananassa HOM05D008207 ORTHO05D000286 6.1e-99 365.2 310 61.3
Sabra12G0024900 Salix brachista HOM05D008207 ORTHO05D010373 1.0e-98 364.4 363 54.0
ATR0580G068 Amborella trichopoda HOM05D008207 ORTHO05D010373 1.7e-96 357.1 287 61.0
PSO170G1964 Papaver somniferum HOM05D008207 ORTHO05D010373 1.7e-96 357.1 245 68.6
Rhsim01G0002700 Rhododendron simsii HOM05D008207 ORTHO05D010373 1.1e-87 327.8 213 72.3
AUR62021326 Chenopodium quinoa HOM05D008207 ORTHO05D010373 5.3e-87 325.5 280 58.9
vmacro13136 Vaccinium macrocarpon HOM05D008207 ORTHO05D010373 3.5e-86 322.8 305 55.7
DCAR_009922 Daucus carota HOM05D008207 ORTHO05D010373 3.8e-85 319.3 232 65.9
Aqoxy5G03535 Aquilegia oxysepala HOM05D008207 ORTHO05D010373 4.7e-83 312.4 262 61.8
EL10Ac8g18310 Beta vulgaris HOM05D008207 ORTHO05D010373 5.2e-82 308.9 305 55.1
Psat4g014640 Pisum sativum HOM05D008207 ORTHO05D010373 8.2e-80 301.6 225 67.1
FvH4_4g06651 Fragaria vesca HOM05D008207 ORTHO05D010373 5.9e-78 295.4 226 64.6
Pp3c22_15400 Physcomitrium patens HOM05D008207 ORTHO05D010373 7.7e-78 295.0 276 53.6
CDE05G0633 Ceratophyllum demersum HOM05D008207 ORTHO05D010373 2.2e-77 293.5 264 55.7
Haze_22076 Corylus avellana HOM05D008207 ORTHO05D010373 1.0e-74 284.6 189 71.4
MD16G1242100 Malus domestica HOM05D008207 ORTHO05D010373 2.8e-67 260.0 218 58.7
Mapoly0010s0073 Marchantia polymorpha HOM05D008207 ORTHO05D010373 1.0e-66 258.1 250 50.0
Eucgr.L03679 Eucalyptus grandis HOM05D008207 ORTHO05D010373 1.8e-55 220.7 169 62.7
Potri.012G036400 Populus trichocarpa HOM05D008207 ORTHO05D010373 9.2e-47 191.8 145 65.5
SMO351G0474 Selaginella moellendorffii HOM05D008207 ORTHO05D010373 1.6e-46 191.0 273 42.1
Actinidia01310 Actinidia chinensis HOM05D008207 ORTHO05D010373 2.2e-40 170.6 122 62.3
Actinidia01309 Actinidia chinensis HOM05D008207 ORTHO05D010373 4.1e-39 166.4 112 70.5
Os02g0462401 Oryza sativa ssp. japonica HOM05D008207 ORTHO05D010373 4.1e-39 166.4 113 66.4
Psat0s6286g0080 Pisum sativum HOM05D008207 ORTHO05D010373 7.8e-30 135.6 95 67.4
Glyma.16G118000 Glycine max HOM05D008207 ORTHO05D010373 2.8e-27 127.1 90 70.0
arahy.Tifrunner.gnm1.ann1.G9LR05 Arachis hypogaea HOM05D008207 ORTHO05D010373 3.6e-27 126.7 94 64.9
MD16G1242000 Malus domestica HOM05D008207 ORTHO05D010373 1.4e-26 124.8 81 70.4
MCO11G473 Micromonas commoda HOM05D008207 ORTHO05D010373 9.9e-25 118.6 288 32.3
SEGI_04181 Sequoiadendron giganteum HOM05D008207 ORTHO05D010373 2.9e-24 117.1 70 72.9
SEGI_33506 Sequoiadendron giganteum HOM05D008207 ORTHO05D010373 4.6e-22 109.8 116 44.8
Haze_22075 Corylus avellana HOM05D008207 ORTHO05D010373 7.3e-20 102.4 54 81.5
arahy.Tifrunner.gnm1.ann1.QBT4P1 Arachis hypogaea HOM05D008207 ORTHO05D010373 3.6e-19 100.1 102 53.9
Psat0s6286g0040 Pisum sativum HOM05D003133 ORTHO05D010373 8.1e-19 99.0 73 65.8
Glyma.02G093251 Glycine max HOM05D008207 ORTHO05D010373 7.6e-17 92.4 68 69.1
Os02g0462300 Oryza sativa ssp. japonica HOM05D008207 ORTHO05D010373 7.6e-17 92.4 49 77.6
SEGI_16784 Sequoiadendron giganteum HOM05D008207 ORTHO05D010373 3.2e-15 87.0 49 73.5
Sabra15G0023300 Salix brachista HOM05D001936 ORTHO05D002296 2.7e-06 57.4 52 50.0


User provided reference genes

Program Settings