Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_1G030960 Cucumis sativus L. HOM05D006752 ORTHO05D008597 6.3e-147 524.2 294 100.0
MELO3C025306.2 Cucumis melo HOM05D006752 ORTHO05D008597 9.1e-122 440.7 261 90.4
ClCG06G010500 Citrullus lanatus HOM05D006752 ORTHO05D008597 4.0e-101 372.1 284 80.3
Sed0015690 Sechium edule HOM05D006752 ORTHO05D008597 4.6e-89 332.0 259 71.8
TAR383G0518 Trochodendron aralioides HOM05D004738 ORTHO05D006439 1.8e-56 223.8 259 53.3
Prupe.7G235200 Prunus persica HOM05D006752 ORTHO05D008597 6.7e-56 221.9 270 50.4
GSVIVG01015454001 Vitis vinifera HOM05D006752 ORTHO05D008597 6.7e-56 221.9 257 51.4
CSS0021299 Camellia sinensis var. sinensis HOM05D006752 ORTHO05D008597 3.3e-55 219.5 263 50.6
ECA234G0120 Erigeron canadensis HOM05D006752 ORTHO05D008597 5.6e-55 218.8 267 50.9
RcHm_v2.0_Chr2g0089761 Rosa chinensis HOM05D006752 ORTHO05D008597 7.4e-55 218.4 266 50.8
PGSC0003DMG400020684 Solanum tuberosum HOM05D006752 ORTHO05D008597 1.6e-54 217.2 260 51.2
Sopen12g002660 Solanum pennellii HOM05D006752 ORTHO05D008597 6.2e-54 215.3 254 50.4
Solyc12g006710.3 Solanum lycopersicum HOM05D006752 ORTHO05D008597 2.4e-53 213.4 254 50.0
CAN.G377.33 Capsicum annuum HOM05D006752 ORTHO05D008597 4.0e-53 212.6 261 49.8
Actinidia20330 Actinidia chinensis HOM05D006752 ORTHO05D008597 6.9e-53 211.8 262 50.4
HanXRQChr10g0317451 Helianthus annuus HOM05D006752 ORTHO05D008597 9.0e-53 211.5 264 47.7
FAN28G1533 Fragaria x ananassa HOM05D006752 ORTHO05D008597 1.2e-52 211.1 264 50.4
Dinv41564 Davidia involucrata HOM05D006752 ORTHO05D008088 1.5e-52 210.7 234 55.1
arahy.Tifrunner.gnm1.ann1.CJP391 Arachis hypogaea HOM05D006752 ORTHO05D008597 3.4e-52 209.5 271 50.6
DCAR_010437 Daucus carota HOM05D006752 ORTHO05D008597 4.5e-52 209.1 268 49.6
FAN26G3101 Fragaria x ananassa HOM05D006752 ORTHO05D008597 7.6e-52 208.4 264 50.8
FvH4_1g04220 Fragaria vesca HOM05D006752 ORTHO05D008597 9.9e-52 208.0 266 48.5
Thecc.09G116900 Theobroma cacao HOM05D006752 ORTHO05D008597 9.9e-52 208.0 261 52.1
arahy.Tifrunner.gnm1.ann1.TG1F9L Arachis hypogaea HOM05D006752 ORTHO05D008597 1.3e-51 207.6 271 50.6
Nitab4.5_0005520g0050 Nicotiana tabacum HOM05D006752 ORTHO05D008597 1.3e-51 207.6 258 49.2
FAN19G2061 Fragaria x ananassa HOM05D006752 ORTHO05D008597 1.7e-51 207.2 266 48.5
Nitab4.5_0001164g0060 Nicotiana tabacum HOM05D006752 ORTHO05D008597 1.7e-51 207.2 257 49.8
CiPaw.04G167500 Carya illinoinensis HOM05D006752 ORTHO05D008597 4.9e-51 205.7 319 43.6
Rhsim01G0090500 Rhododendron simsii HOM05D006752 ORTHO05D008597 1.9e-50 203.8 280 48.2
Atru.chr7.1279 Acer truncatum HOM05D006752 ORTHO05D008597 3.2e-50 203.0 260 47.7
Haze_25667 Corylus avellana HOM05D006752 ORTHO05D008597 4.2e-50 202.6 235 53.2
CANSAT56G2958 Cannabis sativa HOM05D006752 ORTHO05D008597 5.5e-50 202.2 256 48.0
vmacro20678 Vaccinium macrocarpon HOM05D006752 ORTHO05D008597 5.5e-50 202.2 242 52.5
Lalb_Chr11g0071961 Lupinus albus HOM05D006752 ORTHO05D008597 7.1e-50 201.8 263 49.0
MBI01_g13570_MAGBIO Magnolia biondii HOM05D006752 ORTHO05D008597 7.1e-50 201.8 269 48.0
Nn8g39294 Nelumbo nucifera HOM05D006752 ORTHO05D008597 4.6e-49 199.1 259 48.6
Ah.14g081300 Amaranthus hybridus HOM05D006752 ORTHO05D008597 1.0e-48 198.0 268 46.3
Duzib168G0331 Durio zibethinus HOM05D006752 ORTHO05D008597 1.3e-48 197.6 261 47.9
Peaxi162Scf00984g00260 Petunia axillaris HOM05D006752 ORTHO05D008597 1.8e-48 197.2 263 47.5
MD02G1061400 Malus domestica HOM05D006752 ORTHO05D008597 2.3e-48 196.8 270 47.4
Gorai.010G068100 Gossypium raimondii HOM05D006752 ORTHO05D008597 3.0e-48 196.4 261 49.0
Gohir.A06G059800 Gossypium hirsutum HOM05D006752 ORTHO05D008597 6.7e-48 195.3 262 48.9
EL10Ac8g18558 Beta vulgaris HOM05D006752 ORTHO05D008597 1.9e-47 193.7 253 48.6
PSO782G3782 Papaver somniferum HOM05D006752 ORTHO05D008597 1.9e-47 193.7 261 48.7
PGR142G0135 Punica granatum HOM05D006752 ORTHO05D008597 5.6e-47 192.2 266 48.9
Gohir.D06G058000 Gossypium hirsutum HOM05D006752 ORTHO05D008597 9.6e-47 191.4 261 47.9
Sc08g0007050 Simmondsia chinensis HOM05D006752 ORTHO05D008597 1.3e-46 191.0 268 47.4
Lj1g0009545 Lotus japonicus HOM05D006752 ORTHO05D008597 2.8e-46 189.9 311 44.7
VMungo1309G1199 Vigna mungo HOM05D006752 ORTHO05D008597 3.7e-46 189.5 290 46.2
Cpa.g.sc23.163 Carica papaya HOM05D006752 ORTHO05D008597 4.8e-46 189.1 279 45.9
AUR62011040 Chenopodium quinoa HOM05D006393 ORTHO05D008088 4.8e-46 189.1 257 46.7
QL02p086379 Quercus lobata HOM05D006752 ORTHO05D008597 6.2e-46 188.7 359 39.0
Glyma.06G211500 Glycine max HOM05D006752 ORTHO05D008597 1.1e-45 188.0 282 46.8
COL.COLO4_34948 Corchorus olitorius HOM05D006393 ORTHO05D008088 1.8e-45 187.2 237 51.1
AUR62033416 Chenopodium quinoa HOM05D006752 ORTHO05D008597 6.9e-45 185.3 257 45.9
Os01g0178100 Oryza sativa ssp. japonica HOM05D006752 ORTHO05D008597 9.0e-45 184.9 264 47.0
Potri.018G073100 Populus trichocarpa HOM05D006752 ORTHO05D008597 2.6e-44 183.3 331 38.7
Phvul.009G200000 Phaseolus vulgaris HOM05D006752 ORTHO05D008597 3.4e-44 183.0 284 45.8
Sabra18G0063600 Salix brachista HOM05D006752 ORTHO05D008597 4.5e-44 182.6 327 40.1
Manes.03G066500 Manihot esculenta HOM05D006752 ORTHO05D008597 1.3e-43 181.0 318 42.1
Eucgr.C01084 Eucalyptus grandis HOM05D006752 ORTHO05D008597 8.4e-43 178.3 254 45.7
Medtr2g050180 Medicago truncatula HOM05D006752 ORTHO05D008597 1.4e-42 177.6 275 45.8
TWI34G0637 Tripterygium wilfordii HOM05D006752 ORTHO05D008597 1.4e-42 177.6 236 47.9
ATR0815G047 Amborella trichopoda HOM05D006752 ORTHO05D008597 4.2e-42 176.0 292 42.8
TPR.G10362 Trifolium pratense HOM05D006752 ORTHO05D008597 2.1e-41 173.7 274 43.4
Cc06_g09220 Coffea canephora HOM05D006752 ORTHO05D008597 2.7e-41 173.3 262 44.7
Aqoxy7G01881 Aquilegia oxysepala HOM05D006752 ORTHO05D008597 4.6e-41 172.6 252 46.8
Lsat_1_v5_gn_5_99240 Lactuca sativa HOM05D006752 ORTHO05D008597 1.0e-40 171.4 255 42.4
Psat1g025400 Pisum sativum HOM05D006752 ORTHO05D008597 6.7e-40 168.7 274 43.4
Hund09171 Selenicereus undatus HOM05D006752 ORTHO05D008597 1.1e-39 167.9 227 43.6
Oeu018257.1 Olea europaea HOM05D006752 ORTHO05D008597 1.6e-38 164.1 257 41.6
Lj7C639G3 Lonicera japonica HOM05D006752 ORTHO05D008597 1.8e-37 160.6 301 40.9
A10p19780 Brassica napus HOM05D006752 ORTHO05D008597 1.2e-36 157.9 273 43.6
BraA10t44054Z Brassica rapa HOM05D006752 ORTHO05D008597 1.2e-36 157.9 273 43.6
SGA_v2.0_scaffold229G43313 Striga asiatica HOM05D006752 ORTHO05D008597 1.5e-36 157.5 281 38.4
SalBow6G5676 Salvia bowleyana HOM05D006752 ORTHO05D008597 2.0e-36 157.1 269 43.1
THA.LOC104815109 Tarenaya hassleriana HOM05D006752 ORTHO05D008597 5.9e-36 155.6 266 45.1
BcaC04g19401 Brassica carinata HOM05D006752 ORTHO05D008597 2.9e-35 153.3 271 43.2
C09p56100 Brassica napus HOM05D006752 ORTHO05D008597 2.9e-35 153.3 271 43.2
Migut.J01179 Erythranthe guttata HOM05D006752 ORTHO05D008597 6.5e-35 152.1 272 42.3
BolC9t58477H Brassica oleracea HOM05D006752 ORTHO05D008597 1.4e-34 151.0 271 42.8
HPP92_008698 Vanilla planifolia HOM05D006752 ORTHO05D008597 7.2e-34 148.7 256 42.6
MSTRG.19609 Avicennia marina HOM05D006752 ORTHO05D008597 4.6e-33 146.0 268 38.4
Carub.0006s1832 Capsella rubella HOM05D006752 ORTHO05D008597 1.8e-32 144.1 274 40.1
CARHR192900 Cardamine hirsuta HOM05D006752 ORTHO05D008597 3.9e-32 142.9 265 41.9
Thhalv10013545m.g Eutrema salsugineum HOM05D006752 ORTHO05D008597 1.1e-31 141.4 283 39.2
Sp6g24430 Schrenkiella parvula HOM05D006752 ORTHO05D008597 3.3e-31 139.8 271 40.6
CDE02G1475 Ceratophyllum demersum HOM05D006752 ORTHO05D008597 1.3e-30 137.9 202 43.1
AT5G19950 Arabidopsis thaliana HOM05D006752 ORTHO05D008597 4.8e-30 136.0 270 40.0
AL6G31480 Arabidopsis lyrata HOM05D006752 ORTHO05D008597 8.2e-30 135.2 285 39.6
Actinidia09396 Actinidia chinensis HOM05D006393 ORTHO05D008088 6.9e-29 132.1 211 45.0
Zm00001eb336920 Zea mays HOM05D006752 ORTHO05D008597 5.9e-28 129.0 232 41.4
BcaB08g36551 Brassica carinata HOM05D006752 ORTHO05D008597 1.0e-27 128.3 265 38.5
Aa31LG8G9350 Aethionema arabicum HOM05D006752 ORTHO05D008597 2.7e-25 120.2 268 37.3
CSS0032277 Camellia sinensis var. sinensis HOM05D006752 ORTHO05D008597 7.4e-23 112.1 169 46.2
Ca_05468_v3 Cicer arietinum L. HOM05D006752 ORTHO05D008597 2.0e-20 104.0 72 69.4
SEGI_05783 Sequoiadendron giganteum HOM05D006752 ORTHO05D008597 2.6e-20 103.6 342 30.7
CSS0016306 Camellia sinensis var. sinensis HOM05D006752 ORTHO05D008597 5.9e-20 102.4 112 50.9
Sc08g0007040 Simmondsia chinensis HOM05D006752 ORTHO05D008597 1.7e-19 100.9 139 46.0
Ca_30697_v3 Cicer arietinum L. HOM05D006752 ORTHO05D008597 4.2e-18 96.3 114 50.9
MD02G1038900 Malus domestica HOM05D006752 ORTHO05D008597 9.4e-18 95.1 122 45.9
MD00G1026200 Malus domestica HOM05D006752 ORTHO05D008597 1.1e-15 88.2 82 53.7
Sc08g0007030 Simmondsia chinensis HOM05D006752 ORTHO05D008597 3.5e-12 76.6 53 64.2
Hma1.2p1_0018F.1_g013060 Hydrangea macrophylla HOM05D006752 ORTHO05D008597 1.7e-11 74.3 51 66.7
Pp3c9_1660 Physcomitrium patens HOM05D006752 ORTHO05D008597 5.0e-11 72.8 319 28.5
Pp3c9_1669 Physcomitrium patens HOM05D006752 ORTHO05D008597 5.0e-11 72.8 319 28.5
MD02G1041600 Malus domestica HOM05D006752 ORTHO05D008597 4.7e-09 66.2 51 58.8
Cc08_g07650 Coffea canephora HOM05D006752 ORTHO05D008597 1.2e-07 61.6 48 58.3
MD00G1027300 Malus domestica HOM05D006752 ORTHO05D008597 7.5e-07 58.9 48 54.2
Mapoly0040s0028 Marchantia polymorpha HOM05D006752 ORTHO05D008597 1.3e-06 58.2 130 35.4


User provided reference genes

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