Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_1G030810 Cucumis sativus L. HOM05D004656 ORTHO05D005404 0.0e+00 1475.3 775 100.0
MELO3C025319.2 Cucumis melo HOM05D004656 ORTHO05D005404 0.0e+00 1455.3 775 98.7
ClCG01G022700 Citrullus lanatus HOM05D004656 ORTHO05D005404 0.0e+00 1369.8 775 92.4
Sed0019970 Sechium edule HOM05D004656 ORTHO05D005404 0.0e+00 1325.1 777 86.7
QL05p081970 Quercus lobata HOM05D004656 ORTHO05D005404 0.0e+00 1102.4 776 72.8
QL03p053091 Quercus lobata HOM05D004656 ORTHO05D005404 0.0e+00 1101.3 776 72.7
MD10G1303000 Malus domestica HOM05D004656 ORTHO05D005404 0.0e+00 1090.9 778 71.7
Gorai.011G022700 Gossypium raimondii HOM05D004656 ORTHO05D005404 0.0e+00 1078.5 778 71.5
Prupe.4G036500 Prunus persica HOM05D004656 ORTHO05D005404 0.0e+00 1075.8 778 70.8
Gohir.A10G020800 Gossypium hirsutum HOM05D004656 ORTHO05D005404 5.3e-312 1074.3 777 71.7
TWI38G2153 Tripterygium wilfordii HOM05D004656 ORTHO05D005404 5.3e-312 1074.3 775 69.7
Atru.chr10.2003 Acer truncatum HOM05D004656 ORTHO05D005404 1.1e-311 1072.8 777 70.0
GSVIVG01003206001 Vitis vinifera HOM05D004656 ORTHO05D005404 1.1e-311 1072.8 777 70.0
RcHm_v2.0_Chr5g0006531 Rosa chinensis HOM05D004656 ORTHO05D005404 1.6e-311 1072.4 779 71.0
Gohir.D10G021600 Gossypium hirsutum HOM05D004656 ORTHO05D005404 2.1e-311 1072.0 788 70.9
Potri.004G034900 Populus trichocarpa HOM05D004656 ORTHO05D005404 8.0e-311 1070.1 779 70.0
Thecc.06G198700 Theobroma cacao HOM05D004656 ORTHO05D005404 8.0e-311 1070.1 777 70.4
COL.COLO4_31575 Corchorus olitorius HOM05D004656 ORTHO05D005404 2.2e-308 1062.0 777 69.4
CiPaw.09G158300 Carya illinoinensis HOM05D004656 ORTHO05D005404 2.9e-308 1061.6 776 70.4
CANSAT56G3558 Cannabis sativa HOM05D004656 ORTHO05D005404 4.1e-307 1057.7 775 68.8
Lalb_Chr05g0218181 Lupinus albus HOM05D004656 ORTHO05D005404 1.2e-306 1056.2 780 69.1
Dinv39815 Davidia involucrata HOM05D004656 ORTHO05D005404 4.6e-306 1054.3 777 69.2
FvH4_3g04050 Fragaria vesca HOM05D004656 ORTHO05D005404 7.8e-306 1053.5 778 69.3
Glyma.07G190600 Glycine max HOM05D004656 ORTHO05D005404 3.9e-305 1051.2 778 68.8
Duzib160G0757 Durio zibethinus HOM05D004656 ORTHO05D005404 1.1e-304 1049.7 795 69.1
FAN11G0019 Fragaria x ananassa HOM05D004656 ORTHO05D005404 4.3e-304 1047.7 782 68.9
Ciclev10014364m.g Citrus clementina HOM05D004656 ORTHO05D005404 5.8e-301 1037.3 777 69.1
Lj4g0008048 Lotus japonicus HOM05D004656 ORTHO05D005404 5.8e-301 1037.3 779 68.0
Cpa.g.sc27.117 Carica papaya HOM05D004656 ORTHO05D005404 2.2e-300 1035.4 773 69.3
arahy.Tifrunner.gnm1.ann1.N579TE Arachis hypogaea HOM05D004656 ORTHO05D005404 1.6e-298 1029.2 778 67.4
Cfa000358 Carpinus fangiana HOM05D004656 ORTHO05D005404 1.3e-297 1026.2 777 68.1
Medtr4g090990 Medicago truncatula HOM05D004656 ORTHO05D005404 1.7e-297 1025.8 778 67.1
Phvul.002G222500 Phaseolus vulgaris HOM05D004656 ORTHO05D005404 2.5e-296 1021.9 784 68.8
FAN16G1451 Fragaria x ananassa HOM05D004656 ORTHO05D005404 3.3e-296 1021.5 778 68.0
VMungo0251G3002 Vigna mungo HOM05D004656 ORTHO05D005404 7.3e-296 1020.4 778 69.2
TPR.G32417 Trifolium pratense HOM05D004656 ORTHO05D005404 1.3e-295 1019.6 789 65.9
arahy.Tifrunner.gnm1.ann1.9GFP5H Arachis hypogaea HOM05D004656 ORTHO05D005404 4.8e-295 1017.7 803 64.9
Sabra04G0020600 Salix brachista HOM05D004656 ORTHO05D005404 3.5e-290 1001.5 750 68.3
Psat7g109640 Pisum sativum HOM05D004656 ORTHO05D005404 1.3e-289 999.6 778 66.2
FAN25G3623 Fragaria x ananassa HOM05D004656 ORTHO05D005404 2.3e-289 998.8 880 61.4
Nn2g12691 Nelumbo nucifera HOM05D004656 ORTHO05D005404 4.8e-287 991.1 777 65.3
vmacro03819 Vaccinium macrocarpon HOM05D004656 ORTHO05D005404 1.4e-286 989.6 868 60.4
DCAR_004136 Daucus carota HOM05D004656 ORTHO05D005404 3.1e-286 988.4 782 64.6
Sopen02g023860 Solanum pennellii HOM05D004656 ORTHO05D005404 3.1e-286 988.4 783 64.5
Solyc02g079050.3 Solanum lycopersicum HOM05D004656 ORTHO05D005404 4.0e-286 988.0 783 64.2
PSO063G3544 Papaver somniferum HOM05D004656 ORTHO05D005404 2.9e-284 981.9 780 64.0
Carub.0007s1989 Capsella rubella HOM05D004656 ORTHO05D005404 7.9e-282 973.8 771 63.9
Cc02_g12490 Coffea canephora HOM05D004656 ORTHO05D005404 7.9e-282 973.8 778 63.4
Aqoxy7G03085 Aquilegia oxysepala HOM05D004656 ORTHO05D005404 1.8e-281 972.6 779 65.0
CAN.G1181.24 Capsicum annuum HOM05D004656 ORTHO05D005404 2.5e-280 968.8 780 63.5
THA.LOC104812734 Tarenaya hassleriana HOM05D004656 ORTHO05D005404 9.6e-280 966.8 771 64.2
AL7G32500 Arabidopsis lyrata HOM05D004656 ORTHO05D005404 8.2e-279 963.8 775 63.6
CSS0039613 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 8.2e-279 963.8 777 64.7
BraA01t01228Z Brassica rapa HOM05D004656 ORTHO05D005404 1.8e-278 962.6 782 62.8
Thhalv10024471m.g Eutrema salsugineum HOM05D004656 ORTHO05D005404 2.4e-278 962.2 776 63.1
AT4G21530 Arabidopsis thaliana HOM05D004656 ORTHO05D005404 3.1e-278 961.8 778 63.1
Aa31LG6G3550 Aethionema arabicum HOM05D004656 ORTHO05D005404 5.8e-277 957.6 778 62.6
A01p12840 Brassica napus HOM05D004656 ORTHO05D005404 7.6e-277 957.2 777 62.9
BolC1t01500H Brassica oleracea HOM05D004656 ORTHO05D005404 4.9e-276 954.5 777 62.5
SalBow7G0840 Salvia bowleyana HOM05D004656 ORTHO05D005404 8.4e-276 953.7 778 62.2
C01p15460 Brassica napus HOM05D004656 ORTHO05D005404 1.9e-275 952.6 786 61.8
SalBow7G0885 Salvia bowleyana HOM05D004656 ORTHO05D005404 3.2e-275 951.8 778 62.2
Nitab4.5_0000190g0180 Nicotiana tabacum HOM05D004656 ORTHO05D005404 7.1e-275 950.7 837 59.5
CARHR228190 Cardamine hirsuta HOM05D004656 ORTHO05D005404 1.0e-273 946.8 771 62.5
PSO782G2217 Papaver somniferum HOM05D004656 ORTHO05D005404 2.3e-273 945.7 778 62.2
Migut.E00415 Erythranthe guttata HOM05D004656 ORTHO05D005404 3.9e-273 944.9 778 61.3
HanXRQChr17g0551051 Helianthus annuus HOM05D004656 ORTHO05D005404 5.1e-273 944.5 781 62.7
Nitab4.5_0003574g0090 Nicotiana tabacum HOM05D004656 ORTHO05D005404 1.1e-272 943.3 776 62.4
Peaxi162Scf00588g01013 Petunia axillaris HOM05D004656 ORTHO05D005404 3.1e-270 935.3 778 62.2
Sp7g19640 Schrenkiella parvula HOM05D004656 ORTHO05D005404 8.5e-268 927.2 774 61.6
BcaNung02789 Brassica carinata HOM05D004656 ORTHO05D005404 1.4e-267 926.4 803 60.1
Lsat_1_v5_gn_4_57080 Lactuca sativa HOM05D004656 ORTHO05D005404 5.5e-267 924.5 783 62.1
MBI16_g41806_MAGBIO Magnolia biondii HOM05D004656 ORTHO05D005404 5.5e-267 924.5 879 57.2
Sc17g0006590 Simmondsia chinensis HOM05D004656 ORTHO05D005404 2.8e-263 912.1 778 59.8
ECA234G0402 Erigeron canadensis HOM05D004656 ORTHO05D005404 8.2e-263 910.6 784 61.6
Oeu053939.3 Olea europaea HOM05D004656 ORTHO05D005404 1.1e-262 910.2 777 60.6
Haze_06568 Corylus avellana HOM05D004656 ORTHO05D005404 1.0e-260 903.7 687 68.3
AUR62016904 Chenopodium quinoa HOM05D004656 ORTHO05D005404 8.5e-260 900.6 774 59.6
Manes.15G100000 Manihot esculenta HOM05D004656 ORTHO05D005404 1.4e-259 899.8 740 64.1
PGR042G3654 Punica granatum HOM05D004656 ORTHO05D005404 1.4e-259 899.8 779 60.5
AUR62014723 Chenopodium quinoa HOM05D004656 ORTHO05D005404 3.0e-249 865.5 743 59.4
SGA_v2.0_scaffold92G28242 Striga asiatica HOM05D004656 ORTHO05D005404 3.7e-247 858.6 783 56.7
Lj2A281G21 Lonicera japonica HOM05D004656 ORTHO05D005404 2.3e-241 839.3 772 58.0
ATR0580G317 Amborella trichopoda HOM05D004656 ORTHO05D005404 1.2e-240 837.0 784 56.1
HPP92_015366 Vanilla planifolia HOM05D004656 ORTHO05D005404 1.5e-232 810.1 791 54.7
EL10Ac8g20612 Beta vulgaris HOM05D004656 ORTHO05D005404 4.2e-227 792.0 769 55.7
Zm00001eb192820 Zea mays HOM05D004656 ORTHO05D005404 2.3e-209 733.0 775 52.3
Ca_18486_v3 Cicer arietinum L. HOM05D004656 ORTHO05D005404 9.5e-203 711.1 540 67.0
BcaNung02790 Brassica carinata HOM05D004656 ORTHO05D005404 1.7e-191 673.7 496 67.5
GSVIVG01003202001 Vitis vinifera HOM05D004656 ORTHO05D005404 3.5e-189 666.0 485 70.7
AL7G32520 Arabidopsis lyrata HOM05D004656 ORTHO05D005404 1.3e-180 637.5 595 58.2
TAR626G0166 Trochodendron aralioides HOM05D004656 ORTHO05D005404 4.2e-174 615.9 479 66.8
CDE02G2476 Ceratophyllum demersum HOM05D004656 ORTHO05D005404 1.0e-164 584.7 772 44.8
Eucgr.E03497 Eucalyptus grandis HOM05D004656 ORTHO05D005404 1.9e-158 563.9 426 67.1
unitig_8.g3352 Utricularia gibba HOM05D004656 ORTHO05D005404 3.6e-141 506.5 514 52.3
Pp3c19_17530 Physcomitrium patens HOM05D004656 ORTHO05D005404 7.4e-139 498.8 796 38.4
Eucgr.D02667 Eucalyptus grandis HOM05D004656 ORTHO05D005404 5.3e-137 492.7 403 64.0
Mapoly0038s0098 Marchantia polymorpha HOM05D004656 ORTHO05D005404 8.0e-133 478.8 790 38.1
Hma1.2p1_1241F.1_g269840 Hydrangea macrophylla HOM05D004656 ORTHO05D005404 1.4e-132 478.0 507 54.2
AagrBONN_evm.TU.Sc2ySwM_117.1500 Anthoceros agrestis HOM05D004656 ORTHO05D005404 1.0e-95 355.5 747 32.8
BcaC09g51339 Brassica carinata HOM05D004656 ORTHO05D005404 3.0e-95 354.0 447 47.7
Hund23621 Selenicereus undatus HOM05D004656 ORTHO05D005404 8.1e-93 345.9 378 47.6
CBR_g50890 Chara braunii HOM05D004656 ORTHO05D000048 1.8e-92 344.7 837 30.5
BcaC09g51334 Brassica carinata HOM05D004656 ORTHO05D005404 6.4e-90 336.3 442 46.6
Eucgr.E03552 Eucalyptus grandis HOM05D004656 ORTHO05D005404 3.5e-88 330.5 256 67.2
arahy.Tifrunner.gnm1.ann1.QWV34J Arachis hypogaea HOM05D004656 ORTHO05D005404 1.2e-83 315.5 266 61.7
BcaC09g51337 Brassica carinata HOM05D004656 ORTHO05D005404 1.7e-79 301.6 379 47.2
Eucgr.C00026 Eucalyptus grandis HOM05D004656 ORTHO05D005404 1.7e-71 275.0 187 72.2
Ca_18485_v3 Cicer arietinum L. HOM05D004656 ORTHO05D005404 5.1e-71 273.5 190 69.5
SEGI_33901 Sequoiadendron giganteum HOM05D004656 ORTHO05D005404 6.9e-68 263.1 392 39.3
unitig_8.g3351 Utricularia gibba HOM05D004656 ORTHO05D005404 2.8e-53 214.5 229 50.2
QL02p031126 Quercus lobata HOM05D004656 ORTHO05D005404 2.1e-48 198.4 174 65.5
SMO119G0264 Selaginella moellendorffii HOM05D004656 ORTHO05D005404 2.5e-41 174.9 769 24.6
SHI02118 Sapria himalayana HOM05D004656 ORTHO05D005404 4.6e-40 170.6 187 47.1
RcHm_v2.0_Chr5g0006431 Rosa chinensis HOM05D004656 ORTHO05D005404 1.1e-38 166.0 323 37.2
SHI02121 Sapria himalayana HOM05D004656 ORTHO05D005404 1.1e-36 159.5 255 38.8
SEGI_08767 Sequoiadendron giganteum HOM05D004656 ORTHO05D005404 3.6e-32 144.4 164 48.2
Os02g0785900 Oryza sativa ssp. japonica HOM05D004656 ORTHO05D005404 1.0e-31 142.9 107 80.4
Zm00001eb125490 Zea mays HOM05D004656 ORTHO05D005404 2.5e-30 138.3 110 62.7
Hund23620 Selenicereus undatus HOM05D004656 ORTHO05D005404 3.7e-29 134.4 86 75.6
Zm00001eb384090 Zea mays HOM05D004656 ORTHO05D005404 3.7e-29 134.4 110 61.8
EL10Ac6g14063 Beta vulgaris HOM05D004656 ORTHO05D005404 9.1e-28 129.8 85 74.1
CSS0025603 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 1.2e-27 129.4 80 75.0
EL10Ac9g22460 Beta vulgaris HOM05D004656 ORTHO05D005404 1.7e-26 125.6 83 73.5
CSS0042439 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 2.9e-26 124.8 75 77.3
Hma1.2p1_0144F.1_g064710 Hydrangea macrophylla HOM05D004656 ORTHO05D005404 6.5e-26 123.6 61 91.8
CSS0038861 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 1.4e-25 122.5 80 71.2
PRCOL_00000091 Prasinoderma coloniale HOM05D004656 ORTHO05D005404 3.2e-25 121.3 458 24.0
Eucgr.C00045 Eucalyptus grandis HOM05D004656 ORTHO05D005404 7.2e-25 120.2 83 71.1
Haze_06207 Corylus avellana HOM05D004656 ORTHO05D005404 7.9e-24 116.7 61 86.9
CSS0002071 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 6.7e-23 113.6 83 66.3
Eucgr.E01958 Eucalyptus grandis HOM05D004656 ORTHO05D005404 3.3e-22 111.3 117 50.4
CSS0005991 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 9.7e-22 109.8 105 50.5
Cre12.g556650 Chlamydomonas reinhardtii HOM05D004656 ORTHO05D005404 4.8e-21 107.5 508 21.9
SGA_v2.0_scaffold159G37668 Striga asiatica HOM05D004656 ORTHO05D005404 6.3e-21 107.1 151 43.0
MELO3C008912.2 Cucumis melo HOM05D004656 ORTHO05D005404 4.1e-20 104.4 55 92.7
Hma1.2p1_1241F.1_g269830 Hydrangea macrophylla HOM05D004656 ORTHO05D005404 1.6e-19 102.4 61 80.3
MCO05G135 Micromonas commoda HOM05D004656 ORTHO05D005404 2.9e-18 98.2 487 22.2
MELO3C032683.2 Cucumis melo HOM05D004656 ORTHO05D005404 1.2e-16 92.8 61 72.1
TAR369G0180 Trochodendron aralioides HOM05D004656 ORTHO05D005404 1.6e-16 92.4 48 85.4
Zm00001eb266270 Zea mays HOM05D004656 ORTHO05D005404 6.1e-16 90.5 81 59.3
Zm00001eb374130 Zea mays HOM05D004656 ORTHO05D005404 1.8e-15 89.0 50 76.0
EL10Ac3g05965 Beta vulgaris HOM05D004656 ORTHO05D005404 3.0e-15 88.2 57 73.7
SHI02114 Sapria himalayana HOM05D004656 ORTHO05D005404 4.0e-15 87.8 56 66.1
CSS0023832 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 3.3e-14 84.7 80 55.0
CSS0033314 Camellia sinensis var. sinensis HOM05D003145 ORTHO05D003586 9.7e-14 83.2 54 74.1
CSS0037848 Camellia sinensis var. sinensis HOM05D003145 ORTHO05D003586 9.7e-14 83.2 54 74.1
Eucgr.E03560 Eucalyptus grandis HOM05D004656 ORTHO05D005404 1.3e-13 82.8 81 50.6
Eucgr.C00011 Eucalyptus grandis HOM05D004656 ORTHO05D005404 1.7e-13 82.4 55 69.1
Eucgr.L00388 Eucalyptus grandis HOM05D004656 ORTHO05D005404 3.7e-13 81.3 60 65.0
Eucgr.E03557 Eucalyptus grandis HOM05D004656 ORTHO05D005404 2.4e-12 78.6 61 60.7
Actinidia29288 Actinidia chinensis HOM05D004656 ORTHO05D005404 2.3e-07 62.0 31 87.1
SHI02119 Sapria himalayana HOM05D004656 ORTHO05D005404 1.5e-06 59.3 46 58.7
Eucgr.D02662 Eucalyptus grandis HOM05D004656 ORTHO05D005404 5.7e-06 57.4 82 46.3
CSS0036547 Camellia sinensis var. sinensis HOM05D004656 ORTHO05D005404 7.5e-06 57.0 80 41.2


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