Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_1G030070 Cucumis sativus L. HOM05D064641 ORTHO05D018996 1.8e-75 285.8 144 100.0
Duzib041G0566 Durio zibethinus HOM05D000047 ORTHO05D000044 1.7e-28 129.8 171 43.3
Duzib041G0625 Durio zibethinus HOM05D000047 ORTHO05D000044 2.2e-28 129.4 173 43.4
Duzib205G1183 Durio zibethinus HOM05D000047 ORTHO05D000044 2.2e-28 129.4 173 43.4
Duzib084G1197 Durio zibethinus HOM05D000047 ORTHO05D000044 9.6e-24 114.0 173 40.5
Duzib106G2061 Durio zibethinus HOM05D000047 ORTHO05D000044 9.6e-24 114.0 173 40.5
Duzib213G0125 Durio zibethinus HOM05D000047 ORTHO05D000044 9.6e-24 114.0 173 40.5
CsaV3_5G027530 Cucumis sativus L. HOM05D000047 ORTHO05D011269 2.8e-23 112.5 72 81.9
Thecc.10G163100 Theobroma cacao HOM05D000047 ORTHO05D000589 4.0e-22 108.6 173 37.0
Thecc.09G167400 Theobroma cacao HOM05D000047 ORTHO05D000589 5.2e-22 108.2 175 38.9
Ca_04839_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 1.2e-21 107.1 173 34.7
Thecc.02G251700 Theobroma cacao HOM05D000047 ORTHO05D000589 4.4e-21 105.1 175 37.1
Ca_04841_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000044 2.4e-19 99.4 173 33.5
CsaV3_5G027520 Cucumis sativus L. HOM05D064641 ORTHO05D018996 3.5e-18 95.5 51 90.2
arahy.Tifrunner.gnm1.ann1.C3BVX0 Arachis hypogaea HOM05D000047 ORTHO05D000352 1.0e-17 94.0 130 40.0
Ca_03536_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 1.9e-16 89.7 180 35.0
Ca_19747_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 1.3e-15 87.0 179 33.0
TWI15G0372 Tripterygium wilfordii HOM05D000047 ORTHO05D000589 1.6e-15 86.7 173 31.2
Ca_23936_v3 Cicer arietinum L. HOM05D002881 ORTHO05D002983 2.1e-15 86.3 153 34.0
Ca_24076_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000044 2.1e-15 86.3 130 37.7
TWI81G0102 Tripterygium wilfordii HOM05D000047 ORTHO05D000589 2.8e-15 85.9 173 30.6
Thecc.02G202400 Theobroma cacao HOM05D000047 ORTHO05D000589 9.0e-14 80.9 152 30.9
Duzib268G1526 Durio zibethinus HOM05D000047 ORTHO05D000589 1.5e-13 80.1 95 44.2
TWI15G0628 Tripterygium wilfordii HOM05D000047 ORTHO05D000589 2.6e-13 79.3 158 32.9
Ca_02666_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 3.8e-12 75.5 143 34.3
Ca_05332_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000044 3.8e-12 75.5 148 36.5
Ca_07062_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000044 4.9e-12 75.1 129 37.2
Sopen03g019140 Solanum pennellii HOM05D000047 ORTHO05D000044 6.4e-12 74.7 164 28.7
Sopen10g027690 Solanum pennellii HOM05D000047 ORTHO05D000044 1.9e-11 73.2 165 27.9
Ca_07046_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 7.1e-11 71.2 125 35.2
Sopen06g005060 Solanum pennellii HOM05D000047 ORTHO05D000044 9.3e-11 70.9 170 26.5
Sopen08g011490 Solanum pennellii HOM05D000047 ORTHO05D000044 9.3e-11 70.9 170 25.9
Sopen10g022130 Solanum pennellii HOM05D000047 ORTHO05D000589 9.3e-11 70.9 170 27.1
Ca_15675_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 1.2e-10 70.5 119 35.3
TPR.G35157 Trifolium pratense HOM05D002881 ORTHO05D000589 1.2e-10 70.5 132 31.8
Sopen01g027730 Solanum pennellii HOM05D000047 ORTHO05D000044 1.6e-10 70.1 170 25.9
Sopen05g018910 Solanum pennellii HOM05D000047 ORTHO05D000044 1.6e-10 70.1 170 25.9
Sopen05g027320 Solanum pennellii HOM05D000047 ORTHO05D000044 1.6e-10 70.1 166 26.5
Sopen12g017930 Solanum pennellii HOM05D000047 ORTHO05D000044 1.6e-10 70.1 170 25.9
Sopen03g011510 Solanum pennellii HOM05D000047 ORTHO05D000589 2.7e-10 69.3 170 25.9
Sopen01g013970 Solanum pennellii HOM05D000047 ORTHO05D000589 3.5e-10 68.9 170 27.6
Sopen02g006620 Solanum pennellii HOM05D000047 ORTHO05D000589 3.5e-10 68.9 170 25.3
Sopen01g017890 Solanum pennellii HOM05D000047 ORTHO05D000589 4.6e-10 68.6 170 25.3
TPR.G35763 Trifolium pratense HOM05D000047 ORTHO05D000589 4.6e-10 68.6 129 29.5
Ca_20599_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 6.0e-10 68.2 96 37.5
TPR.G35080 Trifolium pratense HOM05D000047 ORTHO05D000589 6.0e-10 68.2 132 30.3
Thecc.10G123500 Theobroma cacao HOM05D000047 ORTHO05D000589 7.9e-10 67.8 142 29.6
Sopen03g009310 Solanum pennellii HOM05D000047 ORTHO05D000044 1.3e-09 67.0 170 26.5
Sopen01g016590 Solanum pennellii HOM05D000047 ORTHO05D000589 1.8e-09 66.6 170 27.1
Sopen01g020530 Solanum pennellii HOM05D000047 ORTHO05D000044 3.0e-09 65.9 170 27.1
Sopen06g010460 Solanum pennellii HOM05D000047 ORTHO05D000589 3.0e-09 65.9 170 27.1
TWI34G1550 Tripterygium wilfordii HOM05D000047 ORTHO05D000589 3.9e-09 65.5 138 31.2
TWI39G1040 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 5.1e-09 65.1 52 55.8
Sopen03g009570 Solanum pennellii HOM05D000047 ORTHO05D000589 6.7e-09 64.7 170 24.1
TWI15G0028 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 6.7e-09 64.7 52 55.8
TWI15G0057 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 6.7e-09 64.7 52 55.8
TWI59G1343 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 6.7e-09 64.7 52 55.8
TWI60G0654 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 6.7e-09 64.7 52 55.8
Sopen05g009200 Solanum pennellii HOM05D000047 ORTHO05D000044 8.7e-09 64.3 170 26.5
Sopen07g017290 Solanum pennellii HOM05D000047 ORTHO05D000589 8.7e-09 64.3 166 26.5
TPR.G18553 Trifolium pratense HOM05D000047 ORTHO05D000589 8.7e-09 64.3 131 32.8
Sopen01g014300 Solanum pennellii HOM05D000047 ORTHO05D000589 1.1e-08 63.9 98 34.7
Sopen06g009200 Solanum pennellii HOM05D000047 ORTHO05D000589 1.1e-08 63.9 172 27.9
Sopen12g021750 Solanum pennellii HOM05D000047 ORTHO05D000044 1.1e-08 63.9 171 28.7
TWI15G0701 Tripterygium wilfordii HOM05D000047 ORTHO05D000589 1.5e-08 63.5 137 29.2
TWI81G0789 Tripterygium wilfordii HOM05D000047 ORTHO05D000589 1.9e-08 63.2 139 29.5
PGR142G2721 Punica granatum HOM05D000047 ORTHO05D000589 2.5e-08 62.8 170 28.8
Sopen05g022540 Solanum pennellii HOM05D000047 ORTHO05D000589 3.3e-08 62.4 170 25.3
RhsimMtG0007400 Rhododendron simsii HOM05D000743 ORTHO05D000580 4.3e-08 62.0 126 33.3
Sopen07g015300 Solanum pennellii HOM05D000047 ORTHO05D000589 4.3e-08 62.0 166 25.9
Sopen12g012670 Solanum pennellii HOM05D000047 ORTHO05D000589 4.3e-08 62.0 170 26.5
Sopen10g008400 Solanum pennellii HOM05D000047 ORTHO05D000044 5.6e-08 61.6 158 25.9
CsaV3_4G026810 Cucumis sativus L. HOM05D023515 ORTHO05D018996 7.4e-08 61.2 65 52.3
CsaV3_5G014950 Cucumis sativus L. HOM05D023515 ORTHO05D018996 7.4e-08 61.2 65 52.3
Sopen02g008900 Solanum pennellii HOM05D000047 ORTHO05D000589 7.4e-08 61.2 170 25.3
Sopen03g011950 Solanum pennellii HOM05D000047 ORTHO05D000044 7.4e-08 61.2 159 25.2
Sopen04g013020 Solanum pennellii HOM05D000047 ORTHO05D000589 7.4e-08 61.2 162 24.7
PGR083G2337 Punica granatum HOM05D000047 ORTHO05D007790 9.6e-08 60.8 170 27.1
Sopen07g017440 Solanum pennellii HOM05D000047 ORTHO05D000044 9.6e-08 60.8 170 25.3
Thecc.02G169500 Theobroma cacao HOM05D000047 ORTHO05D000589 1.3e-07 60.5 146 32.2
TPR.G35555 Trifolium pratense HOM05D000047 ORTHO05D000589 1.3e-07 60.5 129 27.9
TWI60G0143 Tripterygium wilfordii HOM05D000047 ORTHO05D000044 1.3e-07 60.5 52 51.9
PGR142G0258 Punica granatum HOM05D000047 ORTHO05D000589 1.6e-07 60.1 171 27.5
Sopen07g010010 Solanum pennellii HOM05D000047 ORTHO05D000589 1.6e-07 60.1 138 27.5
Ca_13231_v3 Cicer arietinum L. HOM05D000047 ORTHO05D011269 2.1e-07 59.7 53 52.8
Ca_13589_v3 Cicer arietinum L. HOM05D000047 ORTHO05D018996 2.1e-07 59.7 80 40.0
Sopen05g021780 Solanum pennellii HOM05D000047 ORTHO05D000589 2.1e-07 59.7 159 27.0
Ca_07368_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000044 3.7e-07 58.9 53 50.9
Sopen04g017320 Solanum pennellii HOM05D000047 ORTHO05D000589 4.8e-07 58.5 173 27.2
Sopen07g009210 Solanum pennellii HOM05D000047 ORTHO05D000044 4.8e-07 58.5 168 25.0
PGR102G2161 Punica granatum HOM05D000047 ORTHO05D000044 6.2e-07 58.2 114 32.5
PGR142G3646 Punica granatum HOM05D000047 ORTHO05D000589 6.2e-07 58.2 170 26.5
Sopen01g011940 Solanum pennellii HOM05D000047 ORTHO05D013907 6.2e-07 58.2 97 32.0
Sopen11g014160 Solanum pennellii HOM05D000047 ORTHO05D000589 6.2e-07 58.2 159 24.5
Sopen11g014900 Solanum pennellii HOM05D000047 ORTHO05D000589 6.2e-07 58.2 170 22.4
PGR100G0012 Punica granatum HOM05D000047 ORTHO05D000044 8.1e-07 57.8 115 34.8
Sopen01g019870 Solanum pennellii HOM05D000047 ORTHO05D000589 8.1e-07 57.8 158 24.1
Sopen12g018290 Solanum pennellii HOM05D000047 ORTHO05D000589 8.1e-07 57.8 138 31.9
PGSC0003DMG400041004 Solanum tuberosum HOM05D000047 ORTHO05D000589 8.1e-07 57.8 170 28.2
Sopen01g020560 Solanum pennellii HOM05D000047 ORTHO05D000589 1.1e-06 57.4 171 25.7
Sopen05g022280 Solanum pennellii HOM05D000047 ORTHO05D000044 1.1e-06 57.4 140 27.1
CsaV3_5G013530 Cucumis sativus L. HOM05D023515 ORTHO05D018996 1.4e-06 57.0 63 50.8
PGR004G2002 Punica granatum HOM05D000047 ORTHO05D000589 1.4e-06 57.0 169 27.2
PGR044G0618 Punica granatum HOM05D000047 ORTHO05D000589 1.8e-06 56.6 170 25.9
Sopen01g011610 Solanum pennellii HOM05D000047 ORTHO05D000044 1.8e-06 56.6 109 30.3
PGSC0003DMG400023285 Solanum tuberosum HOM05D000047 ORTHO05D000589 1.8e-06 56.6 170 26.5
PGR102G2542 Punica granatum HOM05D000047 ORTHO05D000589 2.4e-06 56.2 114 30.7
Sopen12g009400 Solanum pennellii HOM05D000047 ORTHO05D000589 2.4e-06 56.2 170 25.9
PGR044G1494 Punica granatum HOM05D000047 ORTHO05D000589 3.1e-06 55.8 171 26.9
PGR083G2666 Punica granatum HOM05D000047 ORTHO05D000589 3.1e-06 55.8 170 25.9
Sopen05g011640 Solanum pennellii HOM05D000047 ORTHO05D000589 3.1e-06 55.8 168 24.4
Sopen05g027550 Solanum pennellii HOM05D000047 ORTHO05D000044 3.1e-06 55.8 145 27.6
Sopen06g011500 Solanum pennellii HOM05D000047 ORTHO05D000044 3.1e-06 55.8 141 28.4
Ca_27834_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 4.0e-06 55.5 88 34.1
COL.COLO4_07830 Corchorus olitorius HOM05D008815 ORTHO05D010956 4.0e-06 55.5 165 26.7
COL.COLO4_38218 Corchorus olitorius HOM05D008815 ORTHO05D010956 4.0e-06 55.5 165 26.7
Sopen11g013110 Solanum pennellii HOM05D000047 ORTHO05D000589 4.0e-06 55.5 170 26.5
SGA_v2.0_scaffold51G18743 Striga asiatica HOM05D000047 ORTHO05D011269 4.0e-06 55.5 41 53.7
TWI15G0138 Tripterygium wilfordii HOM05D000047 ORTHO05D000589 4.0e-06 55.5 52 48.1
PGR031G2164 Punica granatum HOM05D000047 ORTHO05D000589 5.3e-06 55.1 109 33.0
Sopen07g008920 Solanum pennellii HOM05D000047 ORTHO05D000044 5.3e-06 55.1 165 26.7
TPR.G40443 Trifolium pratense HOM05D000047 ORTHO05D000589 5.3e-06 55.1 53 43.4
Ca_13847_v3 Cicer arietinum L. HOM05D000047 ORTHO05D000589 6.9e-06 54.7 53 47.2
COL.COLO4_24694 Corchorus olitorius HOM05D008815 ORTHO05D010956 6.9e-06 54.7 80 35.0
PGR142G3120 Punica granatum HOM05D000047 ORTHO05D000589 6.9e-06 54.7 170 25.3
Sopen10g013970 Solanum pennellii HOM05D000047 ORTHO05D000589 6.9e-06 54.7 172 27.3
TPR.G22842 Trifolium pratense HOM05D000047 ORTHO05D000044 6.9e-06 54.7 53 49.1
COL.COLO4_03840 Corchorus olitorius HOM05D008815 ORTHO05D010956 9.0e-06 54.3 166 27.7
PGR083G1005 Punica granatum HOM05D000047 ORTHO05D000044 9.0e-06 54.3 107 34.6
Sopen11g018650 Solanum pennellii HOM05D000047 ORTHO05D001422 9.0e-06 54.3 92 29.3
TWI32G0552 Tripterygium wilfordii HOM05D000047 ORTHO05D010956 9.0e-06 54.3 92 33.7
TWI32G1267 Tripterygium wilfordii HOM05D000047 ORTHO05D010956 9.0e-06 54.3 92 33.7


User provided reference genes

Program Settings