Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_1G029540 Cucumis sativus L. HOM05D006491 ORTHO05D008412 6.2e-208 727.2 376 100.0
MELO3C017512.2 Cucumis melo HOM05D006491 ORTHO05D008412 5.7e-193 677.6 381 93.2
ClCG06G012970 Citrullus lanatus HOM05D006491 ORTHO05D008412 3.8e-189 664.8 381 90.8
Dinv41291 Davidia involucrata HOM05D006491 ORTHO05D008412 2.0e-129 466.5 373 64.6
FAN12G3371 Fragaria x ananassa HOM05D006491 ORTHO05D008412 7.1e-127 458.0 370 64.6
Prupe.1G095000 Prunus persica HOM05D006491 ORTHO05D008412 9.2e-127 457.6 383 62.7
CiPaw.07G187800 Carya illinoinensis HOM05D006491 ORTHO05D008412 1.6e-126 456.8 380 63.9
GSVIVG01029103001 Vitis vinifera HOM05D006491 ORTHO05D008412 2.1e-126 456.4 377 64.5
MD13G1262500 Malus domestica HOM05D006491 ORTHO05D008412 2.7e-126 456.1 385 63.1
FAN22G1104 Fragaria x ananassa HOM05D006491 ORTHO05D008412 3.5e-126 455.7 370 64.3
Sabra18G0084000 Salix brachista HOM05D006491 ORTHO05D008412 1.0e-125 454.1 374 63.9
Duzib150G0568 Durio zibethinus HOM05D006491 ORTHO05D008412 1.7e-125 453.4 372 64.2
arahy.Tifrunner.gnm1.ann1.E3AGAX Arachis hypogaea HOM05D006491 ORTHO05D008412 2.3e-125 453.0 364 63.5
Nn2g14424 Nelumbo nucifera HOM05D006491 ORTHO05D008412 3.9e-125 452.2 384 61.7
Sed0015960 Sechium edule HOM05D006491 ORTHO05D008412 8.6e-125 451.1 279 79.2
RcHm_v2.0_Chr4g0404161 Rosa chinensis HOM05D006491 ORTHO05D008412 2.5e-124 449.5 348 67.0
arahy.Tifrunner.gnm1.ann1.1P8XK5 Arachis hypogaea HOM05D006491 ORTHO05D008412 3.3e-124 449.1 364 63.7
Manes.14G150100 Manihot esculenta HOM05D006491 ORTHO05D008412 3.3e-124 449.1 378 61.1
TWI63G0546 Tripterygium wilfordii HOM05D006491 ORTHO05D008412 4.3e-124 448.7 383 61.4
TAR383G0527 Trochodendron aralioides HOM05D006491 ORTHO05D008412 2.1e-123 446.4 382 62.3
Actinidia17330 Actinidia chinensis HOM05D006491 ORTHO05D008412 4.7e-123 445.3 383 60.8
Potri.018G096900 Populus trichocarpa HOM05D006491 ORTHO05D008412 4.7e-123 445.3 375 62.4
QL02p096111 Quercus lobata HOM05D006491 ORTHO05D008412 1.1e-122 444.1 353 63.2
PGR142G3664 Punica granatum HOM05D006491 ORTHO05D008412 3.1e-122 442.6 374 60.7
Haze_22140 Corylus avellana HOM05D006491 ORTHO05D008412 6.8e-122 441.4 366 63.1
Ciclev10008637m.g Citrus clementina HOM05D006491 ORTHO05D008412 2.6e-121 439.5 372 62.4
Gohir.D08G096700 Gossypium hirsutum HOM05D006491 ORTHO05D008412 2.6e-121 439.5 370 63.2
Gorai.004G103700 Gossypium raimondii HOM05D006491 ORTHO05D008412 3.4e-121 439.1 370 63.2
Lalb_Chr13g0300441 Lupinus albus HOM05D006491 ORTHO05D008412 4.4e-121 438.7 359 63.2
Aqoxy7G03183 Aquilegia oxysepala HOM05D006491 ORTHO05D008412 5.8e-121 438.3 379 60.7
CSS0049223 Camellia sinensis var. sinensis HOM05D006491 ORTHO05D008412 3.7e-120 435.6 373 60.9
VMungo1215G2097 Vigna mungo HOM05D006491 ORTHO05D008412 1.4e-119 433.7 378 61.4
Lj4g0007651 Lotus japonicus HOM05D006491 ORTHO05D008412 4.1e-119 432.2 365 62.5
Ca_21191_v3 Cicer arietinum L. HOM05D006491 ORTHO05D008412 5.4e-119 431.8 373 60.6
Gohir.A08G070300 Gossypium hirsutum HOM05D006491 ORTHO05D008412 5.4e-119 431.8 370 62.7
Cpa.g.sc450.5 Carica papaya HOM05D006491 ORTHO05D008412 2.1e-118 429.9 395 57.0
MSTRG.10725 Avicennia marina HOM05D006491 ORTHO05D008412 6.0e-118 428.3 394 56.9
TPR.G5304 Trifolium pratense HOM05D006491 ORTHO05D008412 3.0e-117 426.0 369 61.2
Phvul.003G149900 Phaseolus vulgaris HOM05D006491 ORTHO05D008412 5.1e-117 425.2 373 59.0
Rhsim03G0262200 Rhododendron simsii HOM05D006491 ORTHO05D008412 2.5e-116 422.9 373 60.1
CANSAT11G0137 Cannabis sativa HOM05D006491 ORTHO05D008412 4.3e-116 422.2 387 58.1
Medtr4g129150 Medicago truncatula HOM05D006491 ORTHO05D008412 4.3e-116 422.2 375 60.5
COL.COLO4_16079 Corchorus olitorius HOM05D006491 ORTHO05D008412 9.6e-116 421.0 382 59.7
Psat4g010880 Pisum sativum HOM05D006491 ORTHO05D008412 1.6e-115 420.2 377 58.6
MBI14_g24284_MAGBIO Magnolia biondii HOM05D006491 ORTHO05D008412 2.1e-115 419.9 380 57.6
Atru.chr7.558 Acer truncatum HOM05D006491 ORTHO05D008412 9.9e-113 411.0 326 65.3
HanXRQChr05g0136551 Helianthus annuus HOM05D006491 ORTHO05D008412 1.3e-112 410.6 358 59.2
Thecc.09G163600 Theobroma cacao HOM05D006491 ORTHO05D008412 2.2e-112 409.8 357 61.6
EL10Ac8g18256 Beta vulgaris HOM05D006491 ORTHO05D008412 2.4e-111 406.4 371 59.8
Ah.09g229650 Amaranthus hybridus HOM05D006491 ORTHO05D008412 3.2e-111 406.0 366 60.4
Thhalv10025588m.g Eutrema salsugineum HOM05D006491 ORTHO05D008412 1.2e-110 404.1 363 57.0
Oeu043515.2 Olea europaea HOM05D006491 ORTHO05D008412 1.6e-110 403.7 436 51.8
Sp7g25960 Schrenkiella parvula HOM05D006491 ORTHO05D008412 3.5e-110 402.5 369 56.4
CARHR235700 Cardamine hirsuta HOM05D006491 ORTHO05D008412 6.0e-110 401.7 361 57.6
Sc14g0001140 Simmondsia chinensis HOM05D006491 ORTHO05D008412 1.3e-109 400.6 337 62.0
Carub.0007s1278 Capsella rubella HOM05D006491 ORTHO05D008412 1.7e-109 400.2 358 56.1
A08p20250 Brassica napus HOM05D006491 ORTHO05D008412 6.6e-109 398.3 361 57.1
ECA236G3989 Erigeron canadensis HOM05D006491 ORTHO05D008412 6.6e-109 398.3 362 59.4
BraA08t33984Z Brassica rapa HOM05D006491 ORTHO05D008412 1.1e-108 397.5 361 57.1
Aa31LG3G170 Aethionema arabicum HOM05D006491 ORTHO05D008412 1.3e-107 394.0 359 55.2
AL7G24610 Arabidopsis lyrata HOM05D006491 ORTHO05D008412 2.1e-107 393.3 358 55.3
vmacro06036 Vaccinium macrocarpon HOM05D006491 ORTHO05D008412 2.1e-107 393.3 389 54.5
Nitab4.5_0003408g0120 Nicotiana tabacum HOM05D006491 ORTHO05D008412 1.1e-106 391.0 373 56.6
Os09g0428900 Oryza sativa ssp. japonica HOM05D006491 ORTHO05D008412 1.4e-106 390.6 373 56.6
Lsat_1_v5_gn_8_65441 Lactuca sativa HOM05D006491 ORTHO05D008412 2.4e-106 389.8 362 55.8
Nitab4.5_0000593g0170 Nicotiana tabacum HOM05D006491 ORTHO05D008412 2.4e-106 389.8 367 56.9
C08p10580 Brassica napus HOM05D006491 ORTHO05D008412 6.9e-106 388.3 361 55.4
BolC8t48733H Brassica oleracea HOM05D006491 ORTHO05D008412 9.0e-106 387.9 361 55.4
CAN.G135.50 Capsicum annuum HOM05D006491 ORTHO05D008412 9.0e-106 387.9 368 55.4
Glyma.17G067500 Glycine max HOM05D006491 ORTHO05D008412 1.2e-105 387.5 369 56.4
BcaC07g38308 Brassica carinata HOM05D006491 ORTHO05D008412 2.6e-105 386.3 361 55.1
PGSC0003DMG401027355 Solanum tuberosum HOM05D006491 ORTHO05D008412 7.6e-105 384.8 359 57.7
Migut.K00266 Erythranthe guttata HOM05D006491 ORTHO05D008412 1.7e-104 383.6 380 56.3
THA.LOC104817809 Tarenaya hassleriana HOM05D006491 ORTHO05D008412 2.2e-104 383.3 333 58.9
Cfa013536 Carpinus fangiana HOM05D006491 ORTHO05D008412 3.8e-104 382.5 288 66.3
PSO063G6711 Papaver somniferum HOM05D006491 ORTHO05D008412 1.1e-103 380.9 340 56.8
BcaB03g12553 Brassica carinata HOM05D006491 ORTHO05D008412 5.4e-103 378.6 328 59.5
PSO782G2884 Papaver somniferum HOM05D006491 ORTHO05D008412 5.4e-103 378.6 374 52.9
Solyc11g007750.3 Solanum lycopersicum HOM05D006491 ORTHO05D008412 7.1e-103 378.3 359 57.1
Cc06_g13780 Coffea canephora HOM05D006491 ORTHO05D008412 1.2e-102 377.5 392 53.1
Sopen11g003610 Solanum pennellii HOM05D006491 ORTHO05D008412 3.5e-102 375.9 357 56.9
ATR0580G190 Amborella trichopoda HOM05D006491 ORTHO05D008412 6.0e-102 375.2 371 54.2
FAN07G0899 Fragaria x ananassa HOM05D006491 ORTHO05D008412 2.3e-101 373.2 370 57.6
Zm00001eb313540 Zea mays HOM05D006491 ORTHO05D008412 1.9e-100 370.2 352 56.0
Actinidia17333 Actinidia chinensis HOM05D006491 ORTHO05D008412 1.2e-97 360.9 301 61.1
unitig_62.g23494 Utricularia gibba HOM05D006491 ORTHO05D008412 8.4e-96 354.8 344 54.7
FvH4_4g08360 Fragaria vesca HOM05D006491 ORTHO05D008412 2.4e-95 353.2 244 71.3
Glyma.13G093000 Glycine max HOM05D006491 ORTHO05D008412 3.2e-95 352.8 265 67.2
Peaxi162Scf00113g00085 Petunia axillaris HOM05D006491 ORTHO05D008412 3.5e-94 349.4 277 62.1
Eucgr.C00197 Eucalyptus grandis HOM05D006491 ORTHO05D008412 4.6e-94 349.0 285 60.7
Hund26385 Selenicereus undatus HOM05D006491 ORTHO05D008412 8.7e-93 344.7 378 51.6
AT4G28020 Arabidopsis thaliana HOM05D006491 ORTHO05D008412 1.2e-89 334.3 277 59.9
AUR62040289 Chenopodium quinoa HOM05D006491 ORTHO05D008412 1.5e-89 334.0 342 53.2
DCAR_017948 Daucus carota HOM05D006491 ORTHO05D008412 1.0e-88 331.3 237 69.6
AUR62039980 Chenopodium quinoa HOM05D006491 ORTHO05D008412 1.7e-88 330.5 342 52.9
Pp3c9_21480 Physcomitrium patens HOM05D006491 ORTHO05D008412 2.1e-86 323.6 398 46.5
Hma1.2p1_0921F.1_g236670 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 8.7e-85 318.2 314 54.8
SMO358G0273 Selaginella moellendorffii HOM05D006491 ORTHO05D008412 8.7e-85 318.2 364 48.1
Actinidia14076 Actinidia chinensis HOM05D006491 ORTHO05D008412 1.2e-81 307.8 240 63.8
AagrBONN_evm.TU.Sc2ySwM_344.1093 Anthoceros agrestis HOM05D006491 ORTHO05D008412 1.5e-81 307.4 294 54.1
Actinidia25168 Actinidia chinensis HOM05D006491 ORTHO05D008412 1.1e-76 291.2 208 66.3
Mapoly0045s0079 Marchantia polymorpha HOM05D006491 ORTHO05D008412 2.2e-75 287.0 318 48.7
Lj9A730G48 Lonicera japonica HOM05D006491 ORTHO05D008412 5.9e-73 278.9 171 74.3
SGA_v2.0_scaffold242G44263 Striga asiatica HOM05D006491 ORTHO05D008412 1.5e-68 264.2 296 49.3
Peaxi162Scf00532g00051 Petunia axillaris HOM05D006491 ORTHO05D008412 3.3e-68 263.1 333 46.8
CDE05G0295 Ceratophyllum demersum HOM05D006491 ORTHO05D008412 1.5e-65 254.2 280 49.3
Cre14.g613450 Chlamydomonas reinhardtii HOM05D006491 ORTHO05D008412 1.0e-53 214.9 254 45.3
arahy.Tifrunner.gnm1.ann1.6S8GSB Arachis hypogaea HOM05D006491 ORTHO05D008412 3.1e-50 203.4 188 60.6
MELO3C026731.2 Cucumis melo HOM05D006491 ORTHO05D008412 3.1e-50 203.4 140 75.0
SEGI_13660 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 3.4e-44 183.3 137 63.5
MCO01G751 Micromonas commoda HOM05D006491 ORTHO05D008412 4.8e-43 179.5 319 36.1
PRCOL_00001913 Prasinoderma coloniale HOM05D006491 ORTHO05D008412 1.9e-39 167.5 207 44.4
MCO14G289 Micromonas commoda HOM05D006491 ORTHO05D008412 2.4e-34 150.6 231 39.8
SEGI_21199 Sequoiadendron giganteum HOM05D006491 ORTHO05D008412 2.0e-28 131.0 190 41.1
SGA_v2.0_scaffold242G44258 Striga asiatica HOM05D006491 ORTHO05D008412 3.7e-27 126.7 71 83.1
Duzib168G0391 Durio zibethinus HOM05D006491 ORTHO05D008412 1.4e-13 81.6 102 46.1
GSVIVG01029402001 Vitis vinifera HOM05D006491 ORTHO05D008412 3.7e-11 73.6 58 55.2
Hma1.2p1_1576F.1_g291650 Hydrangea macrophylla HOM05D006491 ORTHO05D008412 9.2e-10 68.9 67 49.3
Nn2g16007 Nelumbo nucifera HOM05D006491 ORTHO05D008412 4.3e-07 60.1 69 50.7


User provided reference genes

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