Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_1G028410 Cucumis sativus L. HOM05D007076 ORTHO05D008800 6.9e-142 507.3 255 100.0
MELO3C010270.2 Cucumis melo HOM05D007076 ORTHO05D008800 1.8e-134 482.6 255 94.1
ClCG06G011950 Citrullus lanatus HOM05D007076 ORTHO05D008800 9.6e-128 460.3 255 89.4
Sed0007180 Sechium edule HOM05D007076 ORTHO05D008800 4.8e-119 431.4 255 83.9
CiPaw.15G183500 Carya illinoinensis HOM05D007076 ORTHO05D008800 7.7e-101 370.9 249 73.1
QL02p091054 Quercus lobata HOM05D007076 ORTHO05D008800 6.5e-100 367.9 247 74.1
Gohir.A05G012200 Gossypium hirsutum HOM05D007076 ORTHO05D008800 2.7e-98 362.5 250 71.6
Gohir.D05G013300 Gossypium hirsutum HOM05D007076 ORTHO05D008800 1.0e-97 360.5 250 71.2
Gorai.009G013300 Gossypium raimondii HOM05D007076 ORTHO05D008800 1.0e-97 360.5 250 71.2
Thecc.09G139600 Theobroma cacao HOM05D007076 ORTHO05D008800 1.4e-97 360.1 247 72.9
Duzib168G1701 Durio zibethinus HOM05D007076 ORTHO05D008800 3.0e-97 359.0 244 72.1
CANSAT11G0571 Cannabis sativa HOM05D007076 ORTHO05D008800 8.8e-97 357.5 247 71.3
Eucgr.C04107 Eucalyptus grandis HOM05D007076 ORTHO05D008800 1.1e-96 357.1 248 70.6
TAR625G0498 Trochodendron aralioides HOM05D007076 ORTHO05D008800 2.0e-96 356.3 249 72.3
Prupe.7G256300 Prunus persica HOM05D007076 ORTHO05D008800 1.3e-95 353.6 231 73.2
GSVIVG01012872001 Vitis vinifera HOM05D007076 ORTHO05D008800 1.7e-95 353.2 213 77.5
Actinidia21919 Actinidia chinensis HOM05D007076 ORTHO05D008800 3.7e-95 352.1 254 67.7
Cfa020904 Carpinus fangiana HOM05D007076 ORTHO05D008800 3.7e-95 352.1 253 71.1
FAN26G2288 Fragaria x ananassa HOM05D007076 ORTHO05D008800 1.4e-94 350.1 248 69.0
MD15G1161100 Malus domestica HOM05D007076 ORTHO05D008800 1.4e-94 350.1 242 69.8
FAN23G1541 Fragaria x ananassa HOM05D007076 ORTHO05D008800 3.1e-94 349.0 248 68.5
FvH4_1g01870 Fragaria vesca HOM05D007076 ORTHO05D008800 4.1e-94 348.6 248 68.5
FAN19G3087 Fragaria x ananassa HOM05D007076 ORTHO05D008800 4.1e-94 348.6 248 68.5
PGR142G4145 Punica granatum HOM05D007076 ORTHO05D008800 9.1e-94 347.4 255 71.8
Oeu058595.1 Olea europaea HOM05D007076 ORTHO05D008800 1.2e-93 347.1 251 68.5
RcHm_v2.0_Chr2g0086841 Rosa chinensis HOM05D007076 ORTHO05D008800 1.6e-93 346.7 248 68.5
Manes.14G120300 Manihot esculenta HOM05D007076 ORTHO05D008800 3.8e-92 342.0 251 70.1
TWI34G1052 Tripterygium wilfordii HOM05D007076 ORTHO05D008800 1.1e-91 340.5 245 71.8
Ciclev10009248m.g Citrus clementina HOM05D007076 ORTHO05D008800 4.2e-91 338.6 254 67.7
Lsat_1_v5_gn_7_46141 Lactuca sativa HOM05D007076 ORTHO05D008800 4.7e-90 335.1 251 68.1
Ca_21630_v3 Cicer arietinum L. HOM05D007076 ORTHO05D008800 6.1e-90 334.7 251 67.3
Ca_30692_v3 Cicer arietinum L. HOM05D007076 ORTHO05D008800 6.1e-90 334.7 251 67.3
Glyma.17G106200 Glycine max HOM05D007076 ORTHO05D008800 1.8e-89 333.2 250 67.6
Rhsim01G0051700 Rhododendron simsii HOM05D007076 ORTHO05D008800 1.8e-89 333.2 252 65.9
Glyma.13G164900 Glycine max HOM05D007076 ORTHO05D008800 2.3e-89 332.8 251 67.7
Lalb_Chr07g0179431 Lupinus albus HOM05D007076 ORTHO05D008800 3.0e-89 332.4 245 67.3
PSO017G3183 Papaver somniferum HOM05D007076 ORTHO05D008800 4.0e-89 332.0 244 66.4
Potri.006G060100 Populus trichocarpa HOM05D007076 ORTHO05D008800 4.0e-89 332.0 248 66.5
Solyc07g007280.4 Solanum lycopersicum HOM05D007076 ORTHO05D008800 4.0e-89 332.0 219 72.1
DCAR_017767 Daucus carota HOM05D007076 ORTHO05D008800 5.2e-89 331.6 235 69.4
HanXRQChr09g0243091 Helianthus annuus HOM05D007076 ORTHO05D008800 5.2e-89 331.6 251 64.9
PSO170G2339 Papaver somniferum HOM05D007076 ORTHO05D008800 6.8e-89 331.3 246 66.7
Peaxi162Scf00088g00017 Petunia axillaris HOM05D007076 ORTHO05D008800 6.8e-89 331.3 258 65.9
Nitab4.5_0008829g0010 Nicotiana tabacum HOM05D007076 ORTHO05D008800 8.8e-89 330.9 224 71.4
vmacro21890 Vaccinium macrocarpon HOM05D007076 ORTHO05D008800 8.8e-89 330.9 254 66.9
MSTRG.19622 Avicennia marina HOM05D007076 ORTHO05D008800 1.2e-88 330.5 244 68.0
COL.COLO4_24128 Corchorus olitorius HOM05D007076 ORTHO05D008800 2.0e-88 329.7 204 76.0
Lj4g0004831 Lotus japonicus HOM05D007076 ORTHO05D008800 2.0e-88 329.7 251 64.9
Cpa.g.sc46.76 Carica papaya HOM05D007076 ORTHO05D008800 2.6e-88 329.3 250 68.4
Nitab4.5_0003305g0010 Nicotiana tabacum HOM05D007076 ORTHO05D008800 3.4e-88 328.9 248 67.3
Medtr4g116350 Medicago truncatula HOM05D007076 ORTHO05D008800 5.7e-88 328.2 250 65.2
Sabra06G0043400 Salix brachista HOM05D000638 ORTHO05D000801 7.5e-88 327.8 218 71.6
TPR.G15804 Trifolium pratense HOM05D007076 ORTHO05D008800 7.5e-88 327.8 251 66.5
CAN.G728.2 Capsicum annuum HOM05D007076 ORTHO05D008800 1.3e-87 327.0 207 73.4
Sopen07g003340 Solanum pennellii HOM05D007076 ORTHO05D008800 1.3e-87 327.0 251 65.7
PGSC0003DMG400030692 Solanum tuberosum HOM05D007076 ORTHO05D008800 2.2e-87 326.2 225 70.2
Nn1g00072 Nelumbo nucifera HOM05D007076 ORTHO05D008800 8.3e-87 324.3 244 66.8
THA.LOC104817530 Tarenaya hassleriana HOM05D007076 ORTHO05D008800 3.1e-86 322.4 241 65.6
Thhalv10001598m.g Eutrema salsugineum HOM05D007076 ORTHO05D008800 5.3e-86 321.6 237 66.2
A04p35120 Brassica napus HOM05D007076 ORTHO05D008800 7.0e-86 321.2 201 73.1
BraA04t18948Z Brassica rapa HOM05D007076 ORTHO05D008800 7.0e-86 321.2 201 73.1
AL4G47500 Arabidopsis lyrata HOM05D007076 ORTHO05D008800 1.6e-85 320.1 206 73.3
VMungo1215G2969 Vigna mungo HOM05D007076 ORTHO05D008800 2.0e-85 319.7 245 66.1
Aa31LG1G29340 Aethionema arabicum HOM05D007076 ORTHO05D008800 2.7e-85 319.3 243 65.0
Nn2g12218 Nelumbo nucifera HOM05D007076 ORTHO05D008800 2.7e-85 319.3 241 67.2
BcaB06g29501 Brassica carinata HOM05D007076 ORTHO05D008800 4.5e-85 318.5 199 73.4
BcaC02g06997 Brassica carinata HOM05D007076 ORTHO05D008800 5.9e-85 318.2 227 67.0
CARHR143300 Cardamine hirsuta HOM05D007076 ORTHO05D008800 7.7e-85 317.8 243 65.0
Sp4g29830 Schrenkiella parvula HOM05D007076 ORTHO05D008800 7.7e-85 317.8 209 70.8
Psat7g049360 Pisum sativum HOM05D007076 ORTHO05D008800 1.3e-84 317.0 252 64.7
Carub.0004s3063 Capsella rubella HOM05D007076 ORTHO05D008800 2.9e-84 315.8 230 67.8
BolC4t28783H Brassica oleracea HOM05D007076 ORTHO05D008800 5.0e-84 315.1 228 66.7
FAN28G0280 Fragaria x ananassa HOM05D007076 ORTHO05D008800 6.5e-84 314.7 246 64.6
Ah.00g000030 Amaranthus hybridus HOM05D007076 ORTHO05D008800 8.5e-84 314.3 238 66.4
Dinv41435 Davidia involucrata HOM05D007076 ORTHO05D008800 8.5e-84 314.3 221 69.7
EL10Ac8g18804 Beta vulgaris HOM05D007076 ORTHO05D008800 1.5e-83 313.5 228 68.0
Migut.J01262 Erythranthe guttata HOM05D007076 ORTHO05D008800 2.5e-83 312.8 225 69.3
Aqoxy7G02462 Aquilegia oxysepala HOM05D007076 ORTHO05D008800 1.2e-82 310.5 253 62.8
AUR62041461 Chenopodium quinoa HOM05D007076 ORTHO05D008800 2.1e-82 309.7 232 64.7
MBI14_g03617_MAGBIO Magnolia biondii HOM05D007076 ORTHO05D008800 6.1e-82 308.1 256 63.7
Haze_19333 Corylus avellana HOM05D007076 ORTHO05D008800 1.0e-81 307.4 253 63.2
CDE05G2705 Ceratophyllum demersum HOM05D007076 ORTHO05D008800 2.3e-81 306.2 247 61.5
Phvul.003G173400 Phaseolus vulgaris HOM05D007076 ORTHO05D008800 2.3e-81 306.2 176 79.0
Atru.chr7.279 Acer truncatum HOM05D007076 ORTHO05D008800 2.6e-80 302.8 183 75.4
Cc06_g07520 Coffea canephora HOM05D007076 ORTHO05D008800 2.6e-80 302.8 261 60.2
Os08g0167500 Oryza sativa ssp. japonica HOM05D007076 ORTHO05D008800 4.8e-79 298.5 200 70.0
ATR0681G287 Amborella trichopoda HOM05D007076 ORTHO05D008800 5.4e-78 295.0 213 67.6
Lj9A706G31 Lonicera japonica HOM05D007076 ORTHO05D008800 1.3e-76 290.4 176 75.6
AT2G47910 Arabidopsis thaliana HOM05D007076 ORTHO05D008800 2.3e-76 289.7 177 76.3
SalBow1G5229 Salvia bowleyana HOM05D007076 ORTHO05D008800 2.9e-76 289.3 250 58.8
C04p73020 Brassica napus HOM05D007076 ORTHO05D008800 6.6e-76 288.1 169 76.9
Zm00001eb172070 Zea mays HOM05D007076 ORTHO05D008800 1.5e-75 287.0 235 60.9
ECA240G2388 Erigeron canadensis HOM05D007076 ORTHO05D008800 1.9e-75 286.6 175 74.9
arahy.Tifrunner.gnm1.ann1.W7VCER Arachis hypogaea HOM05D007076 ORTHO05D008800 3.3e-75 285.8 249 59.4
Atru.BG.23.p Acer truncatum HOM05D007076 ORTHO05D008800 9.5e-75 284.3 173 76.9
Duzib187G0567 Durio zibethinus HOM05D007076 ORTHO05D008800 4.4e-72 275.4 169 76.3
arahy.Tifrunner.gnm1.ann1.80N34X Arachis hypogaea HOM05D007076 ORTHO05D008800 2.0e-64 250.0 250 54.4
Nn3g21909 Nelumbo nucifera HOM05D007076 ORTHO05D008800 2.9e-63 246.1 178 67.4
unitig_37.g12628 Utricularia gibba HOM05D007076 ORTHO05D008800 8.3e-63 244.6 163 68.1
AUR62011242 Chenopodium quinoa HOM05D007076 ORTHO05D008800 1.1e-62 244.2 226 55.8
Nn1g04045 Nelumbo nucifera HOM05D007076 ORTHO05D008800 6.0e-61 238.4 136 79.4
Mapoly0095s0056 Marchantia polymorpha HOM05D007076 ORTHO05D008800 9.8e-56 221.1 202 51.5
SMO119G0333 Selaginella moellendorffii HOM05D007076 ORTHO05D008800 4.9e-55 218.8 172 57.0
Pp3c22_2510 Physcomitrium patens HOM05D007076 ORTHO05D008800 3.2e-54 216.1 261 47.5
Migut.J01256 Erythranthe guttata HOM05D007076 ORTHO05D008800 5.6e-35 152.1 155 57.4
AagrBONN_evm.TU.Sc2ySwM_362.135 Anthoceros agrestis HOM05D007076 ORTHO05D008800 1.3e-34 151.0 187 43.9
CSS0010696 Camellia sinensis var. sinensis HOM05D007076 ORTHO05D008800 1.3e-26 124.4 64 87.5
Nn1g02289 Nelumbo nucifera HOM05D007076 ORTHO05D008800 6.2e-26 122.1 73 75.3
MD02G1016600 Malus domestica HOM05D007076 ORTHO05D008800 4.0e-25 119.4 248 35.5
CSS0049676 Camellia sinensis var. sinensis HOM05D007076 ORTHO05D008800 9.0e-25 118.2 60 88.3
Oeu028011.1 Olea europaea HOM05D007076 ORTHO05D008800 9.3e-22 108.2 170 40.0
Nn1g02288 Nelumbo nucifera HOM05D007076 ORTHO05D008800 2.8e-18 96.7 77 61.0
CBR_g8382 Chara braunii HOM05D007076 ORTHO05D008800 2.8e-10 70.1 62 46.8


User provided reference genes

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