Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_1G014370 Cucumis sativus L. HOM05D006770 ORTHO05D008356 8.5e-282 973.0 490 100.0
MELO3C004826.2 Cucumis melo HOM05D006770 ORTHO05D008356 1.5e-265 919.1 490 94.9
QL02p014697 Quercus lobata HOM05D006770 ORTHO05D008356 5.5e-172 608.2 505 63.8
Haze_22817 Corylus avellana HOM05D006770 ORTHO05D008356 2.1e-171 606.3 505 63.2
CiPaw.07G136700 Carya illinoinensis HOM05D006770 ORTHO05D008356 8.8e-170 600.9 474 65.6
CSS0047097 Camellia sinensis var. sinensis HOM05D006770 ORTHO05D008356 2.9e-165 585.9 480 62.9
RcHm_v2.0_Chr5g0066911 Rosa chinensis HOM05D006770 ORTHO05D008356 1.9e-164 583.2 463 62.6
Duzib041G0267 Durio zibethinus HOM05D006770 ORTHO05D008356 7.2e-164 581.3 457 63.0
Potri.005G252300 Populus trichocarpa HOM05D006770 ORTHO05D008356 4.7e-163 578.6 493 60.4
Cfa014101 Carpinus fangiana HOM05D006770 ORTHO05D008356 1.8e-162 576.6 392 72.7
FAN13G3072 Fragaria x ananassa HOM05D006770 ORTHO05D008356 1.5e-161 573.5 458 62.0
FAN08G2065 Fragaria x ananassa HOM05D006770 ORTHO05D008356 5.7e-161 571.6 458 61.8
FAN18G3713 Fragaria x ananassa HOM05D006770 ORTHO05D008356 2.2e-160 569.7 455 61.8
TAR625G0814 Trochodendron aralioides HOM05D006770 ORTHO05D008356 2.8e-160 569.3 460 63.9
Thecc.08G061300 Theobroma cacao HOM05D006770 ORTHO05D008356 3.7e-160 568.9 465 61.9
FvH4_5g25440 Fragaria vesca HOM05D006770 ORTHO05D008356 4.8e-160 568.5 455 61.3
Manes.17G081600 Manihot esculenta HOM05D006770 ORTHO05D008356 4.8e-160 568.5 467 63.0
Prupe.5G010100 Prunus persica HOM05D006770 ORTHO05D008356 1.1e-159 567.4 471 61.6
Ca_25485_v3 Cicer arietinum L. HOM05D006770 ORTHO05D008356 3.1e-159 565.8 469 61.0
COL.COLO4_36416 Corchorus olitorius HOM05D006770 ORTHO05D008356 1.2e-158 563.9 480 61.0
MD00G1136800 Malus domestica HOM05D006770 ORTHO05D008356 2.0e-158 563.1 491 59.7
Sabra05G0195800 Salix brachista HOM05D006770 ORTHO05D008356 4.5e-158 562.0 456 62.3
Glyma.07G217000 Glycine max HOM05D006770 ORTHO05D008356 2.9e-157 559.3 488 59.4
TWI79G0343 Tripterygium wilfordii HOM05D006770 ORTHO05D008356 1.5e-156 557.0 471 61.4
Medtr4g084940 Medicago truncatula HOM05D006770 ORTHO05D008356 1.9e-156 556.6 485 59.2
Atru.chr13.120 Acer truncatum HOM05D006770 ORTHO05D008356 4.2e-156 555.4 451 65.2
Ciclev10000935m.g Citrus clementina HOM05D006770 ORTHO05D008356 4.2e-156 555.4 466 61.2
Nn5g30983 Nelumbo nucifera HOM05D006770 ORTHO05D008356 2.7e-155 552.7 459 61.2
PSO541G3292 Papaver somniferum HOM05D006770 ORTHO05D008356 4.7e-155 552.0 480 59.4
EL10Ac1g01921 Beta vulgaris HOM05D006770 ORTHO05D008356 6.1e-155 551.6 474 60.5
Glyma.20G013900 Glycine max HOM05D006770 ORTHO05D008356 6.1e-155 551.6 489 59.1
Manes.05G095800 Manihot esculenta HOM05D006770 ORTHO05D008356 1.4e-154 550.4 468 61.3
Rhsim13G0054100 Rhododendron simsii HOM05D006770 ORTHO05D008356 4.0e-154 548.9 462 61.5
AUR62040821 Chenopodium quinoa HOM05D006770 ORTHO05D008356 5.2e-154 548.5 469 60.8
Phvul.001G002700 Phaseolus vulgaris HOM05D006770 ORTHO05D008356 8.8e-154 547.7 482 57.7
Lalb_Chr05g0219451 Lupinus albus HOM05D006770 ORTHO05D008356 1.5e-153 547.0 466 59.2
VMungo0251G0866 Vigna mungo HOM05D006770 ORTHO05D008356 2.0e-153 546.6 468 59.2
Lj4g0024175 Lotus japonicus HOM05D006770 ORTHO05D008356 2.6e-153 546.2 448 61.8
Oeu032124.1 Olea europaea HOM05D006770 ORTHO05D008356 2.8e-152 542.7 474 60.1
PSO675G2016 Papaver somniferum HOM05D006770 ORTHO05D008356 2.8e-152 542.7 479 58.0
AUR62035131 Chenopodium quinoa HOM05D006770 ORTHO05D008356 1.1e-151 540.8 465 60.2
TPR.G35412 Trifolium pratense HOM05D006770 ORTHO05D008356 2.4e-151 539.7 466 58.4
Gohir.A11G329900 Gossypium hirsutum HOM05D006770 ORTHO05D008356 9.1e-151 537.7 451 60.1
Nitab4.5_0001583g0140 Nicotiana tabacum HOM05D006770 ORTHO05D008356 5.0e-149 531.9 474 59.5
Gorai.006G274800 Gossypium raimondii HOM05D006770 ORTHO05D008356 6.5e-149 531.6 451 59.9
Hund01783 Selenicereus undatus HOM05D006770 ORTHO05D008356 8.5e-149 531.2 462 59.3
THA.LOC104813750 Tarenaya hassleriana HOM05D006770 ORTHO05D008356 8.5e-149 531.2 456 59.2
Gorai.004G294200 Gossypium raimondii HOM05D006770 ORTHO05D008356 4.2e-148 528.9 451 59.2
Sc02g0009170 Simmondsia chinensis HOM05D006770 ORTHO05D008356 2.1e-147 526.6 483 58.4
PGR031G0937 Punica granatum HOM05D006770 ORTHO05D008356 3.6e-147 525.8 459 60.3
Psat7g128200 Pisum sativum HOM05D006770 ORTHO05D008356 8.0e-147 524.6 467 57.4
Nitab4.5_0001225g0180 Nicotiana tabacum HOM05D006770 ORTHO05D008356 1.0e-146 524.2 453 60.0
CANSAT64G1545 Cannabis sativa HOM05D006770 ORTHO05D008356 1.8e-146 523.5 467 60.2
ECA246G3919 Erigeron canadensis HOM05D006770 ORTHO05D008356 3.0e-146 522.7 409 64.3
Sopen02g019170 Solanum pennellii HOM05D006770 ORTHO05D008356 1.5e-145 520.4 482 57.5
Cc09_g04530 Coffea canephora HOM05D006770 ORTHO05D008356 2.0e-145 520.0 479 58.0
Solyc02g070010.1 Solanum lycopersicum HOM05D006770 ORTHO05D008356 2.6e-145 519.6 455 59.3
PGSC0003DMG400021117 Solanum tuberosum HOM05D006770 ORTHO05D008356 5.7e-145 518.5 455 59.3
Gohir.D08G007000 Gossypium hirsutum HOM05D006770 ORTHO05D008356 1.3e-144 517.3 437 60.0
Gohir.A13G000201 Gossypium hirsutum HOM05D006770 ORTHO05D008356 6.3e-144 515.0 402 62.4
Gohir.D08G275542 Gossypium hirsutum HOM05D006770 ORTHO05D008356 6.3e-144 515.0 402 62.4
HanXRQChr06g0167391 Helianthus annuus HOM05D006770 ORTHO05D008356 6.3e-144 515.0 465 58.3
Aqoxy6G01625 Aquilegia oxysepala HOM05D006770 ORTHO05D008356 8.3e-144 514.6 456 57.7
Sc02g0009150 Simmondsia chinensis HOM05D006770 ORTHO05D008356 2.4e-143 513.1 489 56.9
CAN.G79.18 Capsicum annuum HOM05D006770 ORTHO05D008356 7.0e-143 511.5 445 59.8
Aa31LG2G8050 Aethionema arabicum HOM05D006770 ORTHO05D008356 4.5e-142 508.8 460 56.1
CAN.G79.22 Capsicum annuum HOM05D006770 ORTHO05D008356 5.9e-142 508.4 445 59.6
SalBow7G3490 Salvia bowleyana HOM05D006770 ORTHO05D008356 1.7e-141 506.9 379 65.2
Migut.M00215 Erythranthe guttata HOM05D006770 ORTHO05D008356 2.9e-141 506.1 433 58.9
CDE04G3028 Ceratophyllum demersum HOM05D006770 ORTHO05D008356 3.8e-141 505.8 452 58.0
Ah.00g000990 Amaranthus hybridus HOM05D006770 ORTHO05D008356 5.0e-141 505.4 473 56.9
Dinv31957 Davidia involucrata HOM05D006770 ORTHO05D008356 8.6e-141 504.6 353 69.7
Gohir.A01G231900 Gossypium hirsutum HOM05D006770 ORTHO05D008356 9.5e-140 501.1 447 57.5
Lsat_1_v5_gn_3_16821 Lactuca sativa HOM05D006770 ORTHO05D008356 1.8e-138 496.9 423 59.6
Thhalv10004104m.g Eutrema salsugineum HOM05D006770 ORTHO05D008356 4.0e-138 495.7 489 55.0
Gorai.009G456100 Gossypium raimondii HOM05D006770 ORTHO05D008356 4.0e-138 495.7 451 57.4
Sed0018053 Sechium edule HOM05D006770 ORTHO05D008356 4.4e-137 492.3 351 73.2
Sp2g13280 Schrenkiella parvula HOM05D006770 ORTHO05D008356 5.4e-135 485.3 487 53.0
BcaC06g31269 Brassica carinata HOM05D006770 ORTHO05D008356 1.6e-134 483.8 456 56.8
DCAR_024417 Daucus carota HOM05D006770 ORTHO05D008356 1.6e-134 483.8 470 55.5
AT2G01860 Arabidopsis thaliana HOM05D006770 ORTHO05D008356 5.9e-134 481.9 476 54.2
AL5G10970 Arabidopsis lyrata HOM05D006770 ORTHO05D008356 1.1e-132 477.6 476 54.4
BolC7t43787H Brassica oleracea HOM05D006770 ORTHO05D008356 2.1e-131 473.4 457 55.1
BcaC06g34103 Brassica carinata HOM05D006770 ORTHO05D008356 4.7e-131 472.2 478 54.6
CARHR144420 Cardamine hirsuta HOM05D006770 ORTHO05D008356 4.7e-131 472.2 457 55.4
C07p32660 Brassica napus HOM05D006770 ORTHO05D008356 1.8e-130 470.3 457 55.6
Peaxi162Scf00670g00024 Petunia axillaris HOM05D006770 ORTHO05D008356 3.1e-130 469.5 443 58.2
Atru.chr13.118 Acer truncatum HOM05D006770 ORTHO05D008356 4.0e-130 469.2 451 57.9
Carub.0005s0082 Capsella rubella HOM05D006770 ORTHO05D008356 7.5e-129 464.9 460 53.9
Actinidia23351 Actinidia chinensis HOM05D006770 ORTHO05D008356 2.9e-128 463.0 431 57.1
A06p43970 Brassica napus HOM05D006770 ORTHO05D008356 2.9e-128 463.0 460 54.1
BraA06t27272Z Brassica rapa HOM05D006770 ORTHO05D008356 4.1e-127 459.1 457 54.0
vmacro02830 Vaccinium macrocarpon HOM05D006770 ORTHO05D008356 6.0e-126 455.3 337 65.9
Gorai.007G379700 Gossypium raimondii HOM05D006770 ORTHO05D008356 5.0e-125 452.2 403 58.3
SGA_v2.0_scaffold476G52129 Striga asiatica HOM05D006770 ORTHO05D008356 6.8e-114 415.2 425 53.4
ATR0807G062 Amborella trichopoda HOM05D006770 ORTHO05D008356 8.9e-114 414.8 491 47.9
SGA_v2.0_scaffold538G52786 Striga asiatica HOM05D006770 ORTHO05D008356 8.9e-114 414.8 431 52.9
HPP92_007114 Vanilla planifolia HOM05D006770 ORTHO05D008356 4.4e-113 412.5 453 49.7
Lj9P204T39 Lonicera japonica HOM05D006770 ORTHO05D008356 5.1e-109 399.1 334 62.0
MD16G1284100 Malus domestica HOM05D006770 ORTHO05D008356 8.6e-109 398.3 439 51.5
Zm00001eb391890 Zea mays HOM05D006770 ORTHO05D008356 5.6e-108 395.6 415 51.3
SEGI_37300 Sequoiadendron giganteum HOM05D006770 ORTHO05D008356 1.6e-102 377.5 403 47.9
Os02g0118000 Oryza sativa ssp. japonica HOM05D006770 ORTHO05D008356 9.6e-100 368.2 397 50.4
ClCG01G012950 Citrullus lanatus HOM05D006770 ORTHO05D008356 9.3e-87 325.1 194 86.1
Gohir.D11G349500 Gossypium hirsutum HOM05D006770 ORTHO05D008356 5.7e-76 289.3 208 64.9
SEGI_07142 Sequoiadendron giganteum HOM05D006770 ORTHO05D008356 3.3e-68 263.5 390 38.7
Actinidia12910 Actinidia chinensis HOM05D006770 ORTHO05D008356 4.8e-67 259.6 336 47.3
Gohir.A06G000350 Gossypium hirsutum HOM05D006770 ORTHO05D008356 7.7e-65 252.3 192 62.0
CAN.G733.12 Capsicum annuum HOM05D006770 ORTHO05D008356 6.7e-45 186.0 210 48.6
AagrBONN_evm.TU.Sc2ySwM_117.3058 Anthoceros agrestis HOM05D006770 ORTHO05D008356 2.0e-36 157.9 364 29.4
VMungo0720G0800 Vigna mungo HOM05D006770 ORTHO05D008356 2.2e-27 127.9 116 59.5
CAN.G332.6 Capsicum annuum HOM05D006770 ORTHO05D008356 1.5e-23 115.2 106 52.8
Gohir.D02G000400 Gossypium hirsutum HOM05D006770 ORTHO05D008356 6.1e-22 109.8 142 50.7
VMungo0331G1801 Vigna mungo HOM05D002295 ORTHO05D008356 2.0e-20 104.8 100 57.0
Mapoly0166s0014 Marchantia polymorpha HOM05D006770 ORTHO05D008356 3.5e-17 94.0 291 27.8
Pp3c13_18720 Physcomitrium patens HOM05D006770 ORTHO05D008356 1.9e-15 88.2 204 28.4
Pp3c13_18722 Physcomitrium patens HOM05D006770 ORTHO05D008356 1.9e-15 88.2 204 28.4
vmacro02831 Vaccinium macrocarpon HOM05D006770 ORTHO05D008356 2.1e-14 84.7 128 45.3
CBR_g51330 Chara braunii HOM05D009772 ORTHO05D000353 3.4e-12 77.4 326 19.6
Medtr1g008310 Medicago truncatula HOM05D003689 ORTHO05D003950 1.4e-10 72.0 147 26.5
CARHR187690 Cardamine hirsuta HOM05D003689 ORTHO05D003950 4.1e-10 70.5 149 28.2
TAR381G0468 Trochodendron aralioides HOM05D006770 ORTHO05D008356 1.6e-09 68.6 91 44.0
AT5G25630 Arabidopsis thaliana HOM05D003689 ORTHO05D003950 2.0e-09 68.2 121 28.1
Carub.0006s2350 Capsella rubella HOM05D003689 ORTHO05D003950 2.0e-09 68.2 149 26.8
Sp2g21900 Schrenkiella parvula HOM05D003689 ORTHO05D003950 2.0e-09 68.2 124 28.2
MD15G1148600 Malus domestica HOM05D006258 ORTHO05D007961 1.3e-08 65.5 139 25.9
DCAR_017247 Daucus carota HOM05D000891 ORTHO05D000761 5.0e-08 63.5 147 25.9
CDE04G3773 Ceratophyllum demersum HOM05D003689 ORTHO05D003950 6.6e-08 63.2 133 25.6
Manes.14G112800 Manihot esculenta HOM05D006258 ORTHO05D007961 6.6e-08 63.2 139 24.5
Prupe.7G266300 Prunus persica HOM05D006258 ORTHO05D007961 8.6e-08 62.8 139 25.2
HPP92_006127 Vanilla planifolia HOM05D002479 ORTHO05D002675 1.1e-07 62.4 142 22.5
Atru.chr7.3 Acer truncatum HOM05D006258 ORTHO05D007961 1.9e-07 61.6 132 26.5
Sabra06G0004300 Salix brachista HOM05D006258 ORTHO05D007961 2.5e-07 61.2 172 23.3
HPP92_002379 Vanilla planifolia HOM05D005862 ORTHO05D007731 3.3e-07 60.8 195 22.6
Potri.006G005100 Populus trichocarpa HOM05D006258 ORTHO05D007961 4.3e-07 60.5 172 23.3
Nitab4.5_0003410g0050 Nicotiana tabacum HOM05D000891 ORTHO05D000761 7.3e-07 59.7 258 23.6
Phvul.006G027400 Phaseolus vulgaris HOM05D000001 ORTHO05D000003 1.2e-06 58.9 165 24.2
ATR0315G024 Amborella trichopoda HOM05D003689 ORTHO05D003950 1.6e-06 58.5 101 28.7
AUR62028365 Chenopodium quinoa HOM05D006258 ORTHO05D007961 1.6e-06 58.5 139 21.6
Duzib147G0594 Durio zibethinus HOM05D006999 ORTHO05D008936 2.1e-06 58.2 224 23.7
Rhsim12G0149500 Rhododendron simsii HOM05D005362 ORTHO05D006895 2.8e-06 57.8 149 24.2
Rhsim12G0149700 Rhododendron simsii HOM05D005362 ORTHO05D006895 2.8e-06 57.8 149 24.2
TWI63G1632 Tripterygium wilfordii HOM05D006258 ORTHO05D007961 2.8e-06 57.8 134 25.4
MELO3C010202.2 Cucumis melo HOM05D006258 ORTHO05D007961 3.6e-06 57.4 139 23.7
AL2G11780 Arabidopsis lyrata HOM05D003056 ORTHO05D003422 8.1e-06 56.2 159 27.0


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