Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_1G014310 Cucumis sativus L. HOM05D007233 ORTHO05D009043 6.2e-73 277.3 136 100.0
MELO3C004843.2 Cucumis melo HOM05D007233 ORTHO05D009043 5.6e-66 254.2 136 91.2
ClCG01G013980 Citrullus lanatus HOM05D007233 ORTHO05D009043 2.7e-60 235.3 134 84.3
Sed0016181 Sechium edule HOM05D007233 ORTHO05D009043 2.6e-55 218.8 134 79.1
Gohir.D13G228300 Gossypium hirsutum HOM05D007233 ORTHO05D009043 8.1e-49 197.2 136 69.9
Thecc.09G294400 Theobroma cacao HOM05D007233 ORTHO05D009043 6.9e-48 194.1 136 69.9
Sabra04G0127900 Salix brachista HOM05D007233 ORTHO05D009043 2.6e-47 192.2 136 69.1
COL.COLO4_31139 Corchorus olitorius HOM05D007233 ORTHO05D009043 7.6e-47 190.7 134 68.7
Lj3g0012043 Lotus japonicus HOM05D007233 ORTHO05D009043 1.3e-46 189.9 135 68.9
Potri.004G190200 Populus trichocarpa HOM05D007233 ORTHO05D009043 1.7e-46 189.5 136 69.1
Manes.04G010800 Manihot esculenta HOM05D007233 ORTHO05D009043 8.4e-46 187.2 136 66.9
CSS0019792 Camellia sinensis var. sinensis HOM05D007233 ORTHO05D009043 1.1e-45 186.8 137 66.4
VMungo1127G1048 Vigna mungo HOM05D007233 ORTHO05D009043 7.1e-45 184.1 134 65.7
AT1G08390 Arabidopsis thaliana HOM05D007233 ORTHO05D009043 1.2e-44 183.3 136 61.8
Carub.0001s0774 Capsella rubella HOM05D007233 ORTHO05D009043 1.6e-44 183.0 135 63.0
TAR369G0714 Trochodendron aralioides HOM05D007233 ORTHO05D009043 2.1e-44 182.6 133 65.4
Phvul.011G088600 Phaseolus vulgaris HOM05D007233 ORTHO05D009043 2.7e-44 182.2 134 64.2
AL1G18800 Arabidopsis lyrata HOM05D007233 ORTHO05D009043 3.5e-44 181.8 135 61.5
A06p05410 Brassica napus HOM05D007233 ORTHO05D009043 4.6e-44 181.4 135 62.2
BraA06t23750Z Brassica rapa HOM05D007233 ORTHO05D009043 4.6e-44 181.4 135 62.2
Ciclev10030019m.g Citrus clementina HOM05D007233 ORTHO05D009043 4.6e-44 181.4 137 62.8
PGR119G2223 Punica granatum HOM05D007233 ORTHO05D009043 6.0e-44 181.0 132 67.4
SalBow3G1176 Salvia bowleyana HOM05D007233 ORTHO05D009043 7.9e-44 180.6 138 63.0
Ca_10766_v3 Cicer arietinum L. HOM05D007233 ORTHO05D009043 1.0e-43 180.3 137 65.7
Gohir.A13G223500 Gossypium hirsutum HOM05D007233 ORTHO05D009043 1.0e-43 180.3 136 66.9
BcaB07g34087 Brassica carinata HOM05D007233 ORTHO05D009043 1.3e-43 179.9 135 61.5
C05p06530 Brassica napus HOM05D007233 ORTHO05D009043 1.3e-43 179.9 135 61.5
BolC5t29413H Brassica oleracea HOM05D007233 ORTHO05D009043 1.3e-43 179.9 135 61.5
Sp1g07040 Schrenkiella parvula HOM05D007233 ORTHO05D009043 1.3e-43 179.9 135 61.5
TPR.G32017 Trifolium pratense HOM05D007233 ORTHO05D009043 1.8e-43 179.5 137 65.0
THA.LOC104826400 Tarenaya hassleriana HOM05D007233 ORTHO05D009043 2.3e-43 179.1 136 61.0
Aa31LG1G6480 Aethionema arabicum HOM05D007233 ORTHO05D009043 3.9e-43 178.3 138 60.1
Haze_23494 Corylus avellana HOM05D007233 ORTHO05D009043 5.1e-43 177.9 141 64.5
Medtr4g056300 Medicago truncatula HOM05D007233 ORTHO05D009043 5.1e-43 177.9 137 66.4
CiPaw.14G104900 Carya illinoinensis HOM05D007233 ORTHO05D009043 8.7e-43 177.2 138 64.5
Prupe.6G116400 Prunus persica HOM05D007233 ORTHO05D009043 1.1e-42 176.8 132 63.6
Rhsim13G0103700 Rhododendron simsii HOM05D007233 ORTHO05D009043 1.5e-42 176.4 129 68.2
Duzib170G0414 Durio zibethinus HOM05D007233 ORTHO05D009043 1.9e-42 176.0 136 66.2
Glyma.11G190700 Glycine max HOM05D007233 ORTHO05D009043 1.9e-42 176.0 142 62.7
Lalb_Chr03g0027851 Lupinus albus HOM05D007233 ORTHO05D009043 1.9e-42 176.0 135 64.4
Lsat_1_v5_gn_1_61521 Lactuca sativa HOM05D007233 ORTHO05D009043 2.5e-42 175.6 138 63.8
GSVIVG01031420001 Vitis vinifera HOM05D007233 ORTHO05D009043 4.3e-42 174.9 134 61.2
Thhalv10009077m.g Eutrema salsugineum HOM05D007233 ORTHO05D009043 1.3e-41 173.3 135 60.0
SGA_v2.0_scaffold93G28323 Striga asiatica HOM05D007233 ORTHO05D009043 1.3e-41 173.3 142 58.5
EL10Ac9g21047 Beta vulgaris HOM05D007233 ORTHO05D009043 1.6e-41 172.9 139 60.4
QL01p014111 Quercus lobata HOM05D007233 ORTHO05D009043 1.6e-41 172.9 129 62.8
Hund07722 Selenicereus undatus HOM05D007233 ORTHO05D009043 6.2e-41 171.0 134 60.4
vmacro03232 Vaccinium macrocarpon HOM05D007233 ORTHO05D009043 6.2e-41 171.0 129 66.7
ClCG08G000500 Citrullus lanatus HOM05D007233 ORTHO05D009043 8.1e-41 170.6 99 84.8
SHI05395 Sapria himalayana HOM05D007233 ORTHO05D009043 1.8e-40 169.5 137 62.0
FvH4_3g30010 Fragaria vesca HOM05D007233 ORTHO05D009043 2.4e-40 169.1 133 58.6
HanXRQChr11g0345871 Helianthus annuus HOM05D007233 ORTHO05D009043 2.4e-40 169.1 136 61.0
CARHR008260 Cardamine hirsuta HOM05D007233 ORTHO05D009043 3.1e-40 168.7 138 58.7
MSTRG.17742 Avicennia marina HOM05D007233 ORTHO05D009043 4.0e-40 168.3 138 61.6
FAN25G1956 Fragaria x ananassa HOM05D007233 ORTHO05D009043 5.3e-40 167.9 133 58.6
CANSAT78G0435 Cannabis sativa HOM05D007233 ORTHO05D009043 6.9e-40 167.5 138 57.2
Aqoxy1G01014 Aquilegia oxysepala HOM05D007233 ORTHO05D009043 4.5e-39 164.9 133 61.7
unitig_699.g19183 Utricularia gibba HOM05D007233 ORTHO05D009043 4.5e-39 164.9 135 61.5
FAN21G0394 Fragaria x ananassa HOM05D007233 ORTHO05D009043 7.6e-39 164.1 133 57.1
Eucgr.F03331 Eucalyptus grandis HOM05D007233 ORTHO05D009043 1.3e-38 163.3 144 61.1
Peaxi162Scf00150g00710 Petunia axillaris HOM05D007233 ORTHO05D009043 2.2e-38 162.5 138 58.7
arahy.Tifrunner.gnm1.ann1.5NF9YD Arachis hypogaea HOM05D007233 ORTHO05D009043 2.9e-38 162.2 158 53.8
Migut.N02527 Erythranthe guttata HOM05D007233 ORTHO05D009043 2.9e-38 162.2 138 58.7
AUR62031769 Chenopodium quinoa HOM05D007233 ORTHO05D009043 3.8e-38 161.8 142 55.6
ATR0665G357 Amborella trichopoda HOM05D007233 ORTHO05D009043 4.9e-38 161.4 129 62.8
RcHm_v2.0_Chr5g0055931 Rosa chinensis HOM05D007233 ORTHO05D009043 2.4e-37 159.1 133 55.6
Nitab4.5_0000442g0180 Nicotiana tabacum HOM05D007233 ORTHO05D009043 5.5e-37 157.9 139 59.7
Cc01_g10010 Coffea canephora HOM05D007233 ORTHO05D009043 3.5e-36 155.2 142 56.3
Dinv29405 Davidia involucrata HOM05D007233 ORTHO05D009043 3.5e-36 155.2 169 50.9
DCAR_015489 Daucus carota HOM05D007233 ORTHO05D009043 6.0e-36 154.5 137 57.7
Ah.01g016160 Amaranthus hybridus HOM05D007233 ORTHO05D009043 7.9e-36 154.1 145 55.2
Solyc11g066690.2 Solanum lycopersicum HOM05D007233 ORTHO05D009043 1.8e-35 152.9 138 53.6
Sopen11g026420 Solanum pennellii HOM05D007233 ORTHO05D009043 1.8e-35 152.9 138 53.6
MD11G1153700 Malus domestica HOM05D007233 ORTHO05D009043 2.3e-35 152.5 132 59.1
PGSC0003DMG400000464 Solanum tuberosum HOM05D007233 ORTHO05D009043 2.3e-35 152.5 138 52.9
ECA248G0451 Erigeron canadensis HOM05D007233 ORTHO05D009043 1.1e-34 150.2 138 52.9
CAN.G644.46 Capsicum annuum HOM05D007233 ORTHO05D009043 1.5e-34 149.8 138 55.1
PSO339G4613 Papaver somniferum HOM05D007233 ORTHO05D009043 1.6e-33 146.4 133 57.1
PSO063G0378 Papaver somniferum HOM05D007233 ORTHO05D009043 2.8e-33 145.6 133 57.1
MBI04_g22192_MAGBIO Magnolia biondii HOM05D007233 ORTHO05D009043 3.7e-33 145.2 105 65.7
Atru.chr3.3421 Acer truncatum HOM05D007233 ORTHO05D009043 1.2e-31 140.2 98 64.3
Gorai.013G259000 Gossypium raimondii HOM05D007233 ORTHO05D009043 7.1e-29 131.0 97 67.0
Cpa.g.sc47.40 Carica papaya HOM05D007233 ORTHO05D009043 5.1e-27 124.8 106 58.5
Haze_23472 Corylus avellana HOM05D007233 ORTHO05D009043 1.1e-24 117.1 134 52.2
Pp3c26_4940 Physcomitrium patens HOM05D007233 ORTHO05D009043 1.4e-24 116.7 136 44.9
Pp3c26_4950 Physcomitrium patens HOM05D007233 ORTHO05D009043 1.4e-24 116.7 136 44.9
Mapoly0016s0182 Marchantia polymorpha HOM05D007233 ORTHO05D009043 7.6e-23 110.9 131 45.0
Haze_23479 Corylus avellana HOM05D007233 ORTHO05D009043 1.0e-22 110.5 115 53.0
Nn6g35132 Nelumbo nucifera HOM05D007233 ORTHO05D009043 5.0e-22 108.2 80 61.2
TWI31G0123 Tripterygium wilfordii HOM05D007233 ORTHO05D009043 6.5e-22 107.8 118 48.3
Os03g0684300 Oryza sativa ssp. japonica HOM05D007233 ORTHO05D009043 1.9e-21 106.3 141 43.3
Cfa020420 Carpinus fangiana HOM05D007233 ORTHO05D009043 2.5e-21 105.9 95 61.1
Zm00001eb053200 Zea mays HOM05D007233 ORTHO05D009043 3.2e-21 105.5 142 45.1
Cfa010203 Carpinus fangiana HOM05D007233 ORTHO05D009043 7.2e-21 104.4 101 57.4
Psat0s3169g0040 Pisum sativum HOM05D007233 ORTHO05D009043 7.2e-21 104.4 101 56.4
arahy.Tifrunner.gnm1.ann1.9UEW9D Arachis hypogaea HOM05D007233 ORTHO05D009043 6.1e-20 101.3 122 44.3
Haze_23491 Corylus avellana HOM05D007233 ORTHO05D009043 3.9e-19 98.6 147 44.2
AagrBONN_evm.TU.Sc2ySwM_344.3909 Anthoceros agrestis HOM05D007233 ORTHO05D009043 8.2e-17 90.9 105 41.9
Sc12g0003860 Simmondsia chinensis HOM05D007233 ORTHO05D009043 9.1e-16 87.4 80 56.2
Oeu035529.3 Olea europaea HOM05D007233 ORTHO05D009043 2.9e-14 82.4 79 55.7
Duzib168G0428 Durio zibethinus HOM05D007233 ORTHO05D009043 4.2e-13 78.6 152 38.2
CDE02G1642 Ceratophyllum demersum HOM05D007233 ORTHO05D009043 7.2e-13 77.8 81 53.1
arahy.Tifrunner.gnm1.ann1.3ZRX2Z Arachis hypogaea HOM05D007233 ORTHO05D009043 8.8e-11 70.9 66 54.5
Haze_23488 Corylus avellana HOM05D007233 ORTHO05D009043 8.8e-11 70.9 92 45.7
Potri.002G256001 Populus trichocarpa HOM05D007233 ORTHO05D009043 2.0e-07 59.7 40 72.5


User provided reference genes

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