Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_1G011790 Cucumis sativus L. HOM05D007621 ORTHO05D009631 4.0e-273 944.1 469 100.0
MELO3C002556.2 Cucumis melo HOM05D007621 ORTHO05D009631 1.5e-256 889.0 467 95.1
ClCG03G005520 Citrullus lanatus HOM05D007621 ORTHO05D009631 1.4e-244 849.4 468 89.3
Sed0011037 Sechium edule HOM05D007621 ORTHO05D009631 3.0e-220 768.5 435 85.3
GSVIVG01003190001 Vitis vinifera HOM05D007621 ORTHO05D009631 6.6e-191 671.0 469 70.6
Haze_06574 Corylus avellana HOM05D007621 ORTHO05D009631 2.0e-187 659.4 443 72.0
CSS0049226 Camellia sinensis var. sinensis HOM05D007621 ORTHO05D009631 1.7e-186 656.4 430 74.0
Manes.16G020600 Manihot esculenta HOM05D007621 ORTHO05D009631 6.4e-186 654.4 473 66.6
Dinv40478 Davidia involucrata HOM05D007621 ORTHO05D009631 1.6e-184 649.8 471 68.8
Rhsim02G0119600 Rhododendron simsii HOM05D007621 ORTHO05D009631 2.7e-184 649.0 471 68.8
TAR624G0533 Trochodendron aralioides HOM05D007621 ORTHO05D009631 1.3e-183 646.7 473 66.8
QL04p018250 Quercus lobata HOM05D007621 ORTHO05D009631 1.5e-182 643.3 398 75.9
Actinidia11809 Actinidia chinensis HOM05D007621 ORTHO05D009631 3.6e-181 638.6 440 70.2
Nn1g03894 Nelumbo nucifera HOM05D007621 ORTHO05D009631 3.1e-180 635.6 408 72.3
MBI02_g06002_MAGBIO Magnolia biondii HOM05D007621 ORTHO05D009631 1.2e-179 633.6 461 65.9
Cc02_g12430 Coffea canephora HOM05D007621 ORTHO05D009631 4.2e-177 625.2 432 69.0
ATR0693G363 Amborella trichopoda HOM05D007621 ORTHO05D009631 1.0e-175 620.5 454 66.1
Cfa000351 Carpinus fangiana HOM05D007621 ORTHO05D009631 6.6e-175 617.8 457 67.2
TWI38G0795 Tripterygium wilfordii HOM05D007621 ORTHO05D009631 1.9e-174 616.3 463 65.2
RcHm_v2.0_Chr5g0006311 Rosa chinensis HOM05D007621 ORTHO05D009631 3.3e-174 615.5 444 67.1
SGA_v2.0_scaffold49G18280 Striga asiatica HOM05D007621 ORTHO05D009631 5.6e-174 614.8 456 65.6
Ciclev10014484m.g Citrus clementina HOM05D007621 ORTHO05D009631 4.8e-173 611.7 450 65.1
MSTRG.14678 Avicennia marina HOM05D007621 ORTHO05D009631 8.1e-173 610.9 411 69.8
Prupe.4G036900 Prunus persica HOM05D007621 ORTHO05D009631 1.4e-172 610.1 449 65.9
Lj6g0025549 Lotus japonicus HOM05D007621 ORTHO05D009631 1.8e-172 609.8 424 67.5
Glyma.15G067500 Glycine max HOM05D007621 ORTHO05D009631 2.4e-172 609.4 461 64.9
VMungo0540G1980 Vigna mungo HOM05D007621 ORTHO05D009631 2.4e-172 609.4 440 66.4
CDE12G0841 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 4.5e-171 605.1 445 66.3
PGR042G2283 Punica granatum HOM05D007621 ORTHO05D009631 5.8e-171 604.7 441 65.8
Hma1.2p1_1182F.1_g264810 Hydrangea macrophylla HOM05D007621 ORTHO05D009631 1.3e-170 603.6 464 64.9
Nitab4.5_0006573g0020 Nicotiana tabacum HOM05D007621 ORTHO05D009631 2.9e-170 602.4 427 67.0
Nitab4.5_0000190g0070 Nicotiana tabacum HOM05D007621 ORTHO05D009631 3.8e-170 602.1 420 67.9
Psat1g208720 Pisum sativum HOM05D007621 ORTHO05D009631 3.8e-170 602.1 465 61.7
Eucgr.E03798 Eucalyptus grandis HOM05D007621 ORTHO05D009631 6.4e-170 601.3 420 67.4
FAN11G2677 Fragaria x ananassa HOM05D007621 ORTHO05D009631 6.4e-170 601.3 444 65.1
FvH4_3g03980 Fragaria vesca HOM05D007621 ORTHO05D009631 1.1e-169 600.5 410 68.8
SalBow7G3398 Salvia bowleyana HOM05D007621 ORTHO05D009631 1.4e-169 600.1 439 65.1
SalBow7G0238 Salvia bowleyana HOM05D007621 ORTHO05D009631 1.9e-169 599.7 439 65.1
CAN.G424.15 Capsicum annuum HOM05D007621 ORTHO05D009631 1.6e-168 596.7 422 66.1
MD05G1325500 Malus domestica HOM05D007621 ORTHO05D009631 3.3e-166 589.0 473 62.8
Peaxi162Scf00083g00022 Petunia axillaris HOM05D007621 ORTHO05D009631 5.6e-166 588.2 399 67.9
Sopen02g023940 Solanum pennellii HOM05D007621 ORTHO05D009631 1.6e-165 586.6 465 63.0
HPP92_005890 Vanilla planifolia HOM05D007621 ORTHO05D009631 1.6e-165 586.6 463 62.6
Ca_00253_v3 Cicer arietinum L. HOM05D007621 ORTHO05D009631 2.8e-165 585.9 453 64.2
Solyc02g079140.2 Solanum lycopersicum HOM05D007621 ORTHO05D009631 2.8e-165 585.9 465 62.8
PGSC0003DMG400022357 Solanum tuberosum HOM05D007621 ORTHO05D009631 3.1e-164 582.4 498 59.4
CDE01G0329 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 4.0e-164 582.0 448 64.3
SEGI_29793 Sequoiadendron giganteum HOM05D007621 ORTHO05D009631 5.3e-164 581.6 445 62.9
Os04g0636000 Oryza sativa ssp. japonica HOM05D007621 ORTHO05D009631 1.5e-163 580.1 474 61.2
Sc14g0001480 Simmondsia chinensis HOM05D007621 ORTHO05D009631 2.0e-163 579.7 471 61.8
Zm00001eb069260 Zea mays HOM05D007621 ORTHO05D009631 1.7e-162 576.6 460 60.7
EL10Ac8g20530 Beta vulgaris HOM05D007621 ORTHO05D009631 8.4e-162 574.3 436 64.2
arahy.Tifrunner.gnm1.ann1.M1GH8V Arachis hypogaea HOM05D007621 ORTHO05D009631 1.1e-161 573.9 459 60.1
Lsat_1_v5_gn_1_126820 Lactuca sativa HOM05D007621 ORTHO05D009631 1.1e-161 573.9 421 66.5
AUR62014718 Chenopodium quinoa HOM05D007621 ORTHO05D009631 5.5e-161 571.6 447 63.5
AUR62016897 Chenopodium quinoa HOM05D007621 ORTHO05D009631 2.1e-160 569.7 432 65.3
ECA248G3190 Erigeron canadensis HOM05D007621 ORTHO05D009631 3.5e-160 568.9 409 66.0
Lj1C1213T4 Lonicera japonica HOM05D007621 ORTHO05D009631 1.9e-158 563.1 443 62.8
HanXRQChr11g0338441 Helianthus annuus HOM05D007621 ORTHO05D009631 7.4e-158 561.2 440 62.5
FAN16G2797 Fragaria x ananassa HOM05D007621 ORTHO05D009631 4.9e-154 548.5 440 61.8
TPR.G36840 Trifolium pratense HOM05D007621 ORTHO05D009631 7.1e-153 544.7 429 61.8
arahy.Tifrunner.gnm1.ann1.14L1JV Arachis hypogaea HOM05D007621 ORTHO05D009631 2.1e-152 543.1 465 56.6
Phvul.006G192200 Phaseolus vulgaris HOM05D007621 ORTHO05D009631 2.1e-152 543.1 442 61.8
CDE01G0148 Ceratophyllum demersum HOM05D007621 ORTHO05D009631 2.5e-150 536.2 448 59.8
Mapoly0104s0019 Marchantia polymorpha HOM05D007621 ORTHO05D009631 1.9e-145 520.0 453 56.5
PGR042G3240 Punica granatum HOM05D007621 ORTHO05D009631 9.4e-145 517.7 465 57.6
Hund23606 Selenicereus undatus HOM05D007621 ORTHO05D009631 1.3e-138 497.3 366 66.7
Zm00001eb081180 Zea mays HOM05D007621 ORTHO05D009631 1.4e-129 467.2 347 63.4
Thecc.06G199600 Theobroma cacao HOM05D007621 ORTHO05D009631 3.6e-128 462.6 468 53.8
CBR_g725 Chara braunii HOM05D007621 ORTHO05D009631 5.2e-111 405.6 422 47.4
Aqoxy1G02733 Aquilegia oxysepala HOM05D007621 ORTHO05D009631 6.8e-111 405.2 287 67.6
Eucgr.E03700 Eucalyptus grandis HOM05D007621 ORTHO05D009631 4.5e-107 392.5 273 68.9
Zm00001eb274720 Zea mays HOM05D007621 ORTHO05D009631 7.3e-97 358.6 256 66.4
Medtr2g011780 Medicago truncatula HOM05D007621 ORTHO05D009631 1.4e-87 327.8 277 59.2
RcHm_v2.0_Chr7g0240451 Rosa chinensis HOM05D007621 ORTHO05D009631 4.6e-83 312.8 358 46.4
CiPaw.09G157900 Carya illinoinensis HOM05D007621 ORTHO05D009631 1.7e-82 310.8 226 67.7
FAN25G1179 Fragaria x ananassa HOM05D007621 ORTHO05D009631 5.1e-74 282.7 185 73.5
Oeu050825.1 Olea europaea HOM05D007621 ORTHO05D009631 1.2e-72 278.1 196 68.9
arahy.Tifrunner.gnm1.ann1.C857YU Arachis hypogaea HOM05D007621 ORTHO05D009631 3.1e-63 246.9 280 47.1
Psat1g210360 Pisum sativum HOM05D007621 ORTHO05D009631 4.9e-53 213.0 190 57.4
FvH4_6g02023 Fragaria vesca HOM05D007621 ORTHO05D009631 5.7e-41 172.9 133 55.6
Glyma.13G246302 Glycine max HOM05D007621 ORTHO05D009631 4.1e-39 166.8 150 59.3
Atru.chr10.2012 Acer truncatum HOM05D007621 ORTHO05D009631 3.1e-31 140.6 133 54.9
Potri.004G034301 Populus trichocarpa HOM05D007621 ORTHO05D009631 3.2e-28 130.6 78 69.2
Cre02.g116800 Chlamydomonas reinhardtii HOM05D007621 ORTHO05D009631 4.5e-22 110.2 241 32.0
Cpa.g.sc27.127 Carica papaya HOM05D007621 ORTHO05D009631 3.8e-21 107.1 82 63.4
SGA_v2.0_scaffold32G13107 Striga asiatica HOM05D007621 ORTHO05D009631 3.6e-19 100.5 126 46.0
AagrBONN_evm.TU.Sc2ySwM_340.408 Anthoceros agrestis HOM05D007621 ORTHO05D009631 2.0e-14 84.7 78 51.3
Atru.chr10.2011 Acer truncatum HOM05D007621 ORTHO05D009631 2.9e-13 80.9 89 48.3
Sabra04G0020100 Salix brachista HOM05D007621 ORTHO05D009631 8.0e-11 72.8 165 29.1
SGA_v2.0_scaffold86G26914 Striga asiatica HOM05D007621 ORTHO05D009631 1.8e-10 71.6 57 57.9
MCO11G679 Micromonas commoda HOM05D000032 ORTHO05D028824 9.7e-09 65.9 192 30.2
EL10Ac8g20531 Beta vulgaris HOM05D007621 ORTHO05D009631 8.2e-08 62.8 96 39.6


User provided reference genes

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