Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_1G010810 Cucumis sativus L. HOM05D003074 ORTHO05D002434 6.3e-64 247.3 125 100.0
MELO3C002460.2 Cucumis melo HOM05D003074 ORTHO05D002434 6.7e-50 200.7 114 92.1
ClCG03G004770 Citrullus lanatus HOM05D003074 ORTHO05D002434 3.5e-46 188.3 113 85.0
Sed0010919 Sechium edule HOM05D003074 ORTHO05D002434 9.5e-36 153.7 113 74.3
MBI02_g07159_MAGBIO Magnolia biondii HOM05D003074 ORTHO05D002434 3.7e-16 88.6 107 45.8
QL05p073377 Quercus lobata HOM05D003074 ORTHO05D002434 2.4e-15 85.9 118 46.6
Duzib192G0001 Durio zibethinus HOM05D003074 ORTHO05D002434 7.0e-15 84.3 103 47.6
Manes.16G007700 Manihot esculenta HOM05D003074 ORTHO05D002434 1.2e-14 83.6 117 43.6
Thecc.06G219600 Theobroma cacao HOM05D003074 ORTHO05D002434 2.1e-14 82.8 107 46.7
Duzib235G0239 Durio zibethinus HOM05D003074 ORTHO05D002434 7.8e-14 80.9 103 44.7
Cfa000232 Carpinus fangiana HOM05D003074 ORTHO05D002434 2.3e-13 79.3 122 39.3
TAR624G1270 Trochodendron aralioides HOM05D003074 ORTHO05D002434 3.0e-13 79.0 110 44.5
TAR626G1667 Trochodendron aralioides HOM05D003074 ORTHO05D002434 3.0e-13 79.0 111 45.0
Manes.17G038600 Manihot esculenta HOM05D003074 ORTHO05D002434 3.9e-13 78.6 117 45.3
Haze_06793 Corylus avellana HOM05D003074 ORTHO05D002434 6.6e-13 77.8 118 44.1
Nn5g29371 Nelumbo nucifera HOM05D003074 ORTHO05D002434 8.6e-13 77.4 114 42.1
Hma1.2p1_0673F.1_g201330 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 1.1e-12 77.0 118 41.5
Duzib160G0150 Durio zibethinus HOM05D003074 ORTHO05D002434 2.5e-12 75.9 99 43.4
Hma1.2p1_1222F.1_g268140 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 2.5e-12 75.9 118 41.5
CiPaw.09G091000 Carya illinoinensis HOM05D003074 ORTHO05D002434 7.3e-12 74.3 126 40.5
Nn1g03544 Nelumbo nucifera HOM05D003074 ORTHO05D002434 1.2e-11 73.6 107 41.1
Dinv40751 Davidia involucrata HOM05D003074 ORTHO05D002434 2.8e-11 72.4 119 38.7
THA.LOC104812967 Tarenaya hassleriana HOM05D003074 ORTHO05D002434 4.7e-11 71.6 125 34.4
Dinv13888 Davidia involucrata HOM05D003074 ORTHO05D002434 8.1e-11 70.9 85 44.7
Glyma.15G107300 Glycine max HOM05D008677 ORTHO05D002434 1.4e-10 70.1 120 40.8
MBI02_g40709_MAGBIO Magnolia biondii HOM05D003074 ORTHO05D002434 2.3e-10 69.3 73 50.7
Haze_09674 Corylus avellana HOM05D003074 ORTHO05D002434 3.1e-10 68.9 113 38.9
Sabra04G0008200 Salix brachista HOM05D003074 ORTHO05D002434 3.1e-10 68.9 115 39.1
TAR624G0488 Trochodendron aralioides HOM05D003074 ORTHO05D002434 3.1e-10 68.9 109 38.5
Dinv22264 Davidia involucrata HOM05D003074 ORTHO05D002434 4.0e-10 68.6 124 38.7
Potri.011G003100 Populus trichocarpa HOM05D003074 ORTHO05D002434 5.2e-10 68.2 122 42.6
MSTRG.6917 Avicennia marina HOM05D003074 ORTHO05D002434 6.8e-10 67.8 108 41.7
Manes.03G129100 Manihot esculenta HOM05D003074 ORTHO05D002434 6.8e-10 67.8 120 37.5
Ca_00651_v3 Cicer arietinum L. HOM05D008677 ORTHO05D002434 8.9e-10 67.4 122 40.2
TPR.G9935 Trifolium pratense HOM05D008677 ORTHO05D002434 8.9e-10 67.4 121 39.7
CiPaw.12G129500 Carya illinoinensis HOM05D003074 ORTHO05D002434 1.2e-09 67.0 121 36.4
PSO541G1700 Papaver somniferum HOM05D003074 ORTHO05D002434 1.2e-09 67.0 116 36.2
PSO675G3145 Papaver somniferum HOM05D003074 ORTHO05D002434 1.2e-09 67.0 116 36.2
Phvul.006G150100 Phaseolus vulgaris HOM05D008677 ORTHO05D002434 1.2e-09 67.0 118 40.7
Psat1g181240 Pisum sativum HOM05D008677 ORTHO05D002434 1.2e-09 67.0 121 37.2
MBI02_g07158_MAGBIO Magnolia biondii HOM05D003074 ORTHO05D002434 1.5e-09 66.6 73 47.9
Medtr2g023010 Medicago truncatula HOM05D008677 ORTHO05D002434 1.5e-09 66.6 119 40.3
Potri.004G015900 Populus trichocarpa HOM05D003074 ORTHO05D002434 1.5e-09 66.6 115 38.3
Actinidia35342 Actinidia chinensis HOM05D003074 ORTHO05D002434 2.0e-09 66.2 111 39.6
PGSC0003DMG400001089 Solanum tuberosum HOM05D003074 ORTHO05D002434 3.4e-09 65.5 118 41.5
Aa31LG6G3910 Aethionema arabicum HOM05D003074 ORTHO05D002434 4.4e-09 65.1 112 34.8
Cfa020350 Carpinus fangiana HOM05D003074 ORTHO05D002434 4.4e-09 65.1 114 38.6
Migut.M01767 Erythranthe guttata HOM05D003074 ORTHO05D002434 4.4e-09 65.1 119 33.6
Gohir.D10G012900 Gossypium hirsutum HOM05D003074 ORTHO05D002434 4.4e-09 65.1 107 43.0
Gorai.011G014600 Gossypium raimondii HOM05D003074 ORTHO05D002434 4.4e-09 65.1 107 43.0
Sed0007461 Sechium edule HOM05D003074 ORTHO05D002434 4.4e-09 65.1 103 36.9
CiPaw.10G070500 Carya illinoinensis HOM05D003074 ORTHO05D002434 5.8e-09 64.7 134 37.3
Eucgr.E04062 Eucalyptus grandis HOM05D003074 ORTHO05D002434 5.8e-09 64.7 123 37.4
Hma1.2p1_1162F.1_g262580 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 5.8e-09 64.7 120 36.7
MBI18_g22612_MAGBIO Magnolia biondii HOM05D003074 ORTHO05D002434 7.5e-09 64.3 108 37.0
Aqoxy1G02174 Aquilegia oxysepala HOM05D003074 ORTHO05D002434 1.3e-08 63.5 117 34.2
CDE05G3459 Ceratophyllum demersum HOM05D003074 ORTHO05D002434 1.3e-08 63.5 109 37.6
Hma1.2p1_1091F.1_g255850 Hydrangea macrophylla HOM05D003074 ORTHO05D002434 1.7e-08 63.2 112 37.5
Eucgr.E04065 Eucalyptus grandis HOM05D003074 ORTHO05D002434 2.2e-08 62.8 117 38.5
Gohir.A10G013000 Gossypium hirsutum HOM05D003074 ORTHO05D002434 2.2e-08 62.8 107 40.2
Gorai.002G088300 Gossypium raimondii HOM05D003074 ORTHO05D002434 2.2e-08 62.8 113 38.1
CSS0019776 Camellia sinensis var. sinensis HOM05D003074 ORTHO05D002434 2.9e-08 62.4 109 37.6
vmacro03644 Vaccinium macrocarpon HOM05D003074 ORTHO05D002434 2.9e-08 62.4 120 35.8
COL.COLO4_09658 Corchorus olitorius HOM05D003074 ORTHO05D002434 3.7e-08 62.0 125 33.6
ECA240G4169 Erigeron canadensis HOM05D003074 ORTHO05D002434 3.7e-08 62.0 103 37.9
Eucgr.E04063 Eucalyptus grandis HOM05D003074 ORTHO05D002434 3.7e-08 62.0 117 40.2
Gohir.A04G016900 Gossypium hirsutum HOM05D003074 ORTHO05D002434 3.7e-08 62.0 111 36.0
Gohir.D05G369300 Gossypium hirsutum HOM05D003074 ORTHO05D002434 3.7e-08 62.0 111 36.0
Gorai.009G438000 Gossypium raimondii HOM05D003074 ORTHO05D002434 3.7e-08 62.0 111 36.0
Eucgr.E04060 Eucalyptus grandis HOM05D003074 ORTHO05D002434 4.9e-08 61.6 123 36.6
Peaxi162Scf01097g00039 Petunia axillaris HOM05D003074 ORTHO05D002434 4.9e-08 61.6 112 37.5
TWI38G1232 Tripterygium wilfordii HOM05D003074 ORTHO05D002434 4.9e-08 61.6 119 35.3
VMungo0540G1774 Vigna mungo HOM05D008677 ORTHO05D002434 4.9e-08 61.6 127 39.4
Cpa.g.sc97.7 Carica papaya HOM05D003074 ORTHO05D002434 6.4e-08 61.2 104 37.5
Eucgr.E04064 Eucalyptus grandis HOM05D003074 ORTHO05D002434 6.4e-08 61.2 117 38.5
Gorai.009G178200 Gossypium raimondii HOM05D003074 ORTHO05D002434 6.4e-08 61.2 79 49.4
Atru.chr10.2213 Acer truncatum HOM05D003074 ORTHO05D002434 8.3e-08 60.8 62 48.4
FvH4_3g02220 Fragaria vesca HOM05D003074 ORTHO05D002434 8.3e-08 60.8 104 43.3
Gohir.D01G066350 Gossypium hirsutum HOM05D003074 ORTHO05D002434 8.3e-08 60.8 106 36.8
Rhsim13G0146000 Rhododendron simsii HOM05D002761 ORTHO05D003351 8.3e-08 60.8 119 37.0
RhsimUnG0109700 Rhododendron simsii HOM05D003074 ORTHO05D002434 8.3e-08 60.8 119 37.0
Eucgr.E04066 Eucalyptus grandis HOM05D003074 ORTHO05D002434 1.1e-07 60.5 118 37.3
Oeu042936.1 Olea europaea HOM05D003074 ORTHO05D002434 1.1e-07 60.5 109 33.9
RhsimUnG0250800 Rhododendron simsii HOM05D003074 ORTHO05D002434 1.1e-07 60.5 109 34.9
CiPaw.11G189000 Carya illinoinensis HOM05D003074 ORTHO05D002434 1.9e-07 59.7 126 34.1
QL08p010341 Quercus lobata HOM05D003074 ORTHO05D002434 1.9e-07 59.7 115 34.8
ClCG05G014310 Citrullus lanatus HOM05D003074 ORTHO05D002434 2.4e-07 59.3 66 45.5
MELO3C025367.2 Cucumis melo HOM05D003074 ORTHO05D002434 2.4e-07 59.3 75 41.3
Ciclev10009680m.g Citrus clementina HOM05D003074 ORTHO05D002434 3.2e-07 58.9 121 34.7
FvH4_3g22640 Fragaria vesca HOM05D003074 ORTHO05D002434 3.2e-07 58.9 129 31.8
Atru.chr2.3399 Acer truncatum HOM05D003074 ORTHO05D002434 4.1e-07 58.5 127 34.6
EL10Ac4g07810 Beta vulgaris HOM05D003074 ORTHO05D002434 4.1e-07 58.5 100 40.0
CDE05G1751 Ceratophyllum demersum HOM05D003074 ORTHO05D002434 4.1e-07 58.5 107 35.5
Duzib268G1655 Durio zibethinus HOM05D003074 ORTHO05D002434 4.1e-07 58.5 116 33.6
Eucgr.E04061 Eucalyptus grandis HOM05D003074 ORTHO05D002434 4.1e-07 58.5 117 38.5
CANSAT56G1803 Cannabis sativa HOM05D003074 ORTHO05D002434 5.4e-07 58.2 140 35.0
Thhalv10026602m.g Eutrema salsugineum HOM05D003074 ORTHO05D002434 5.4e-07 58.2 83 38.6
FAN11G2929 Fragaria x ananassa HOM05D003074 ORTHO05D002434 5.4e-07 58.2 129 31.8
Gohir.A01G079300 Gossypium hirsutum HOM05D003074 ORTHO05D002434 5.4e-07 58.2 113 36.3
Manes.15G072100 Manihot esculenta HOM05D003074 ORTHO05D002434 5.4e-07 58.2 116 37.9
PGR042G1468 Punica granatum HOM05D003074 ORTHO05D002434 5.4e-07 58.2 114 35.1
FAN16G0504 Fragaria x ananassa HOM05D003074 ORTHO05D002434 7.1e-07 57.8 129 31.8
FAN25G2410 Fragaria x ananassa HOM05D003074 ORTHO05D002434 7.1e-07 57.8 129 31.8
Gorai.010G252600 Gossypium raimondii HOM05D003074 ORTHO05D002434 7.1e-07 57.8 58 53.4
LjContig00272g0022666 Lotus japonicus HOM05D003074 ORTHO05D002434 9.2e-07 57.4 82 42.7
Oeu007582.1 Olea europaea HOM05D003074 ORTHO05D002434 9.2e-07 57.4 112 34.8
PGSC0003DMG400029820 Solanum tuberosum HOM05D003074 ORTHO05D002434 9.2e-07 57.4 55 52.7
DCAR_004216 Daucus carota HOM05D003074 ORTHO05D002434 1.2e-06 57.0 91 37.4
Atru.chr2.3400 Acer truncatum HOM05D003074 ORTHO05D002434 1.6e-06 56.6 136 31.6
DCAR_008152 Daucus carota HOM05D003074 ORTHO05D002434 1.6e-06 56.6 87 36.8
Gohir.A05G169900 Gossypium hirsutum HOM05D003074 ORTHO05D002434 1.6e-06 56.6 114 40.4
MD10G1320500 Malus domestica HOM05D003074 ORTHO05D002434 2.1e-06 56.2 136 39.0
Aqoxy1G02176 Aquilegia oxysepala HOM05D003074 ORTHO05D002434 2.7e-06 55.8 108 34.3
PGR004G0474 Punica granatum HOM05D003074 ORTHO05D002434 2.7e-06 55.8 126 33.3
Ah.04g165880 Amaranthus hybridus HOM05D003074 ORTHO05D002434 3.5e-06 55.5 101 39.6
ClCG10G005340 Citrullus lanatus HOM05D003074 ORTHO05D002434 3.5e-06 55.5 75 37.3
Sed0026688 Sechium edule HOM05D003074 ORTHO05D002434 3.5e-06 55.5 103 33.0
Eucgr.D01318 Eucalyptus grandis HOM05D003074 ORTHO05D002434 4.6e-06 55.1 119 36.1
FAN01G1682 Fragaria x ananassa HOM05D003074 ORTHO05D002434 4.6e-06 55.1 104 41.3
FAN08G3684 Fragaria x ananassa HOM05D003074 ORTHO05D002434 4.6e-06 55.1 104 41.3
FAN25G1645 Fragaria x ananassa HOM05D003074 ORTHO05D002434 4.6e-06 55.1 104 41.3
FAN26G1625 Fragaria x ananassa HOM05D003074 ORTHO05D002434 4.6e-06 55.1 104 41.3
Gohir.D06G213500 Gossypium hirsutum HOM05D003074 ORTHO05D002434 4.6e-06 55.1 58 51.7
MD11G1218800 Malus domestica HOM05D003074 ORTHO05D002434 4.6e-06 55.1 123 31.7
TWI38G1886 Tripterygium wilfordii HOM05D003074 ORTHO05D002434 4.6e-06 55.1 113 34.5
TAR627G0593 Trochodendron aralioides HOM05D003074 ORTHO05D002434 4.6e-06 55.1 55 47.3
Gohir.D05G173050 Gossypium hirsutum HOM05D003074 ORTHO05D002434 6.0e-06 54.7 79 46.8
Medtr3g051610 Medicago truncatula HOM05D003074 ORTHO05D002434 6.0e-06 54.7 80 41.2
Phvul.008G267000 Phaseolus vulgaris HOM05D003074 ORTHO05D002434 6.0e-06 54.7 56 55.4
Sc03g0008600 Simmondsia chinensis HOM05D003074 ORTHO05D002434 6.0e-06 54.7 105 34.3
FAN21G2959 Fragaria x ananassa HOM05D003074 ORTHO05D002434 7.8e-06 54.3 130 30.8
RcHm_v2.0_Chr5g0003291 Rosa chinensis HOM05D003074 ORTHO05D002434 7.8e-06 54.3 105 40.0


User provided reference genes

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