Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CsaV3_1G009400 Cucumis sativus L. HOM05D007996 ORTHO05D009821 2.6e-30 134.8 72 100.0
MELO3C002341.2 Cucumis melo HOM05D007996 ORTHO05D009821 1.8e-26 122.1 75 90.7
ClCG03G003560 Citrullus lanatus HOM05D007996 ORTHO05D009821 2.0e-22 108.6 70 85.7
Sed0027846 Sechium edule HOM05D007996 ORTHO05D009821 1.6e-19 99.0 70 80.0
Sed0008862 Sechium edule HOM05D007996 ORTHO05D009821 3.9e-18 94.4 69 75.4
Thecc.03G124100 Theobroma cacao HOM05D007996 ORTHO05D009821 2.7e-11 71.6 68 60.3
CiPaw.12G036300 Carya illinoinensis HOM05D007996 ORTHO05D009821 6.1e-11 70.5 70 60.0
QL10p004811 Quercus lobata HOM05D007996 ORTHO05D009821 8.8e-10 66.6 70 58.6
Gohir.A12G188200 Gossypium hirsutum HOM05D007996 ORTHO05D009821 2.0e-09 65.5 71 59.2
Gohir.D12G191000 Gossypium hirsutum HOM05D007996 ORTHO05D009821 2.0e-09 65.5 71 59.2
Gorai.008G204900 Gossypium raimondii HOM05D007996 ORTHO05D009821 2.0e-09 65.5 71 59.2
TWI14G0037 Tripterygium wilfordii HOM05D007996 ORTHO05D009821 2.0e-09 65.5 68 55.9
Atru.chr9.1020 Acer truncatum HOM05D007996 ORTHO05D009821 2.5e-09 65.1 70 60.0
CAN.G1046.7 Capsicum annuum HOM05D007996 ORTHO05D009821 3.3e-09 64.7 72 56.9
PGSC0003DMG400027111 Solanum tuberosum HOM05D007996 ORTHO05D009821 5.7e-09 63.9 72 58.3
Duzib084G1431 Durio zibethinus HOM05D007996 ORTHO05D009821 9.7e-09 63.2 69 60.9
Actinidia25607 Actinidia chinensis HOM05D007996 ORTHO05D009821 1.3e-08 62.8 70 54.3
Solyc06g071930.1 Solanum lycopersicum HOM05D007996 ORTHO05D009821 1.3e-08 62.8 72 56.9
Sopen06g028210 Solanum pennellii HOM05D007996 ORTHO05D009821 1.3e-08 62.8 72 56.9
Glyma.05G045400 Glycine max HOM05D007996 ORTHO05D009821 1.7e-08 62.4 70 55.7
Potri.012G094000 Populus trichocarpa HOM05D007996 ORTHO05D009821 1.7e-08 62.4 38 84.2
Manes.14G054700 Manihot esculenta HOM05D007996 ORTHO05D009821 2.2e-08 62.0 36 86.1
Medtr4g103970 Medicago truncatula HOM05D007996 ORTHO05D009821 2.2e-08 62.0 70 55.7
AUR62001291 Chenopodium quinoa HOM05D007996 ORTHO05D009821 2.8e-08 61.6 70 51.4
Phvul.009G168600 Phaseolus vulgaris HOM05D007996 ORTHO05D009821 2.8e-08 61.6 71 52.1
vmacro19229 Vaccinium macrocarpon HOM05D007996 ORTHO05D009821 4.8e-08 60.8 75 50.7
Cpa.g.sc4.79 Carica papaya HOM05D007996 ORTHO05D009821 6.3e-08 60.5 36 83.3
Prupe.5G156000 Prunus persica HOM05D007996 ORTHO05D009821 6.3e-08 60.5 70 54.3
Manes.06G116300 Manihot esculenta HOM05D007996 ORTHO05D009821 8.2e-08 60.1 36 83.3
Rhsim08G0186300 Rhododendron simsii HOM05D007996 ORTHO05D009821 8.2e-08 60.1 37 78.4
Glyma.17G127600 Glycine max HOM05D007996 ORTHO05D009821 1.1e-07 59.7 68 55.9
CiPaw.11G011200 Carya illinoinensis HOM05D007996 ORTHO05D009821 1.4e-07 59.3 71 56.3
Lj4g0006448 Lotus japonicus HOM05D007996 ORTHO05D009821 1.4e-07 59.3 70 51.4
Lalb_Chr07g0183251 Lupinus albus HOM05D007996 ORTHO05D009821 1.4e-07 59.3 70 54.3
Phvul.003G208700 Phaseolus vulgaris HOM05D007996 ORTHO05D009821 1.4e-07 59.3 70 54.3
Potri.015G091300 Populus trichocarpa HOM05D007996 ORTHO05D009821 1.4e-07 59.3 36 83.3
CSS0022418 Camellia sinensis var. sinensis HOM05D007996 ORTHO05D009821 1.8e-07 58.9 38 73.7
Haze_07260 Corylus avellana HOM05D007996 ORTHO05D009821 1.8e-07 58.9 70 54.3
Glyma.04G193300 Glycine max HOM05D007996 ORTHO05D009821 1.8e-07 58.9 71 52.1
Psat4g063440 Pisum sativum HOM05D007996 ORTHO05D009821 3.1e-07 58.2 70 52.9
Actinidia16189 Actinidia chinensis HOM05D007996 ORTHO05D009821 9.1e-07 56.6 36 80.6
EL10Ac7g18091 Beta vulgaris HOM05D007996 ORTHO05D009821 9.1e-07 56.6 70 47.1
Hma1.2p1_0014F.1_g009860 Hydrangea macrophylla HOM05D007996 ORTHO05D009821 9.1e-07 56.6 75 46.7
PGR044G0405 Punica granatum HOM05D007996 ORTHO05D009821 9.1e-07 56.6 68 48.5
TPR.G40415 Trifolium pratense HOM05D007996 ORTHO05D009821 9.1e-07 56.6 70 51.4
Oeu045473.1 Olea europaea HOM05D007996 ORTHO05D009821 1.2e-06 56.2 39 79.5
Solyc03g110990.1 Solanum lycopersicum HOM05D007996 ORTHO05D009821 2.0e-06 55.5 68 50.0
Peaxi162Scf00089g00319 Petunia axillaris HOM05D007996 ORTHO05D009821 2.6e-06 55.1 66 53.0
AUR62025676 Chenopodium quinoa HOM05D007996 ORTHO05D009821 3.4e-06 54.7 70 48.6
Nitab4.5_0005327g0040 Nicotiana tabacum HOM05D007996 ORTHO05D009821 4.5e-06 54.3 68 50.0
Oeu037569.1 Olea europaea HOM05D007996 ORTHO05D009821 5.9e-06 53.9 39 76.9
Lalb_Chr08g0236981 Lupinus albus HOM05D007996 ORTHO05D009821 7.7e-06 53.5 70 47.1


User provided reference genes

Program Settings