Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre17.g744497 Chlamydomonas reinhardtii HOM05D005320 ORTHO05D007922 3.7e-167 591.7 341 100.0
Mapoly0038s0068 Marchantia polymorpha HOM05D005320 ORTHO05D007922 2.7e-32 143.7 207 37.2
AagrBONN_evm.TU.Sc2ySwM_117.2668 Anthoceros agrestis HOM05D005320 ORTHO05D007922 3.0e-31 140.2 205 38.0
CBR_g30417 Chara braunii HOM05D005320 ORTHO05D007922 8.6e-31 138.7 207 38.6
SMO356G0269 Selaginella moellendorffii HOM05D005320 ORTHO05D007922 9.5e-30 135.2 217 36.4
Os03g0679000 Oryza sativa ssp. japonica HOM05D005320 ORTHO05D007922 4.7e-29 132.9 226 34.5
CDE07G0950 Ceratophyllum demersum HOM05D005320 ORTHO05D007922 3.1e-28 130.2 206 35.9
MSTRG.19072 Avicennia marina HOM05D005320 ORTHO05D007922 5.2e-28 129.4 204 35.8
Rhsim05G0195000 Rhododendron simsii HOM05D005320 ORTHO05D007922 6.8e-28 129.0 208 36.1
Cc06_g02320 Coffea canephora HOM05D005320 ORTHO05D007922 8.9e-28 128.6 208 34.1
Dinv35573 Davidia involucrata HOM05D005320 ORTHO05D007922 8.9e-28 128.6 208 36.1
Os01g0144200 Oryza sativa ssp. japonica HOM05D005320 ORTHO05D007922 8.9e-28 128.6 226 34.1
CDE06G1896 Ceratophyllum demersum HOM05D005320 ORTHO05D007922 1.2e-27 128.3 207 35.3
Nitab4.5_0000770g0150 Nicotiana tabacum HOM05D005320 ORTHO05D007922 1.2e-27 128.3 206 35.4
THA.LOC104823414 Tarenaya hassleriana HOM05D005320 ORTHO05D007922 1.5e-27 127.9 216 35.2
CAN.G324.16 Capsicum annuum HOM05D005320 ORTHO05D007922 2.0e-27 127.5 205 35.6
Eucgr.K01475 Eucalyptus grandis HOM05D005320 ORTHO05D007922 2.6e-27 127.1 205 34.1
TWI74G0393 Tripterygium wilfordii HOM05D005320 ORTHO05D007922 2.6e-27 127.1 208 35.6
Glyma.01G100200 Glycine max HOM05D005320 ORTHO05D007922 3.4e-27 126.7 208 35.6
Glyma.03G068800 Glycine max HOM05D005320 ORTHO05D007922 4.4e-27 126.3 208 35.6
Psat7g239840 Pisum sativum HOM05D005320 ORTHO05D007922 5.8e-27 125.9 225 34.2
QL07p030104 Quercus lobata HOM05D005320 ORTHO05D007922 5.8e-27 125.9 208 34.6
QL07p030908 Quercus lobata HOM05D005320 ORTHO05D007922 5.8e-27 125.9 208 34.6
vmacro20179 Vaccinium macrocarpon HOM05D005320 ORTHO05D007922 5.8e-27 125.9 219 35.2
VMungo0331G1509 Vigna mungo HOM05D005320 ORTHO05D007922 5.8e-27 125.9 223 34.1
Ca_20076_v3 Cicer arietinum L. HOM05D005320 ORTHO05D007922 7.5e-27 125.6 208 35.6
Gohir.A04G083900 Gossypium hirsutum HOM05D005320 ORTHO05D007922 7.5e-27 125.6 225 33.8
Gohir.D04G122700 Gossypium hirsutum HOM05D005320 ORTHO05D007922 7.5e-27 125.6 225 33.8
MD12G1146200 Malus domestica HOM05D005320 ORTHO05D007922 7.5e-27 125.6 206 35.0
PGR031G0341 Punica granatum HOM05D005320 ORTHO05D007922 7.5e-27 125.6 204 34.8
Solyc10g084850.2 Solanum lycopersicum HOM05D005320 ORTHO05D007922 7.5e-27 125.6 210 35.7
Sopen10g034290 Solanum pennellii HOM05D005320 ORTHO05D007922 7.5e-27 125.6 210 35.7
PGSC0003DMG400011070 Solanum tuberosum HOM05D005320 ORTHO05D007922 7.5e-27 125.6 210 35.7
Thecc.05G035400 Theobroma cacao HOM05D005320 ORTHO05D007922 7.5e-27 125.6 209 34.4
Actinidia05326 Actinidia chinensis HOM05D005320 ORTHO05D007922 9.8e-27 125.2 208 35.1
Nn2g11189 Nelumbo nucifera HOM05D005320 ORTHO05D007922 9.8e-27 125.2 206 35.0
PSO063G2683 Papaver somniferum HOM05D005320 ORTHO05D007922 9.8e-27 125.2 206 35.0
MD04G1133400 Malus domestica HOM05D005320 ORTHO05D007922 1.3e-26 124.8 206 34.5
TPR.G17890 Trifolium pratense HOM05D005320 ORTHO05D007922 1.3e-26 124.8 208 35.6
Lj3g0008944 Lotus japonicus HOM05D005320 ORTHO05D007922 1.7e-26 124.4 208 35.6
PSO339G2759 Papaver somniferum HOM05D005320 ORTHO05D007922 1.7e-26 124.4 206 34.5
SGA_v2.0_scaffold126G33759 Striga asiatica HOM05D005320 ORTHO05D007922 1.7e-26 124.4 204 35.3
TAR623G0888 Trochodendron aralioides HOM05D005320 ORTHO05D007922 1.7e-26 124.4 206 34.0
CSS0049441 Camellia sinensis var. sinensis HOM05D005320 ORTHO05D007922 2.2e-26 124.0 208 35.6
Migut.J00304 Erythranthe guttata HOM05D005320 ORTHO05D007922 2.2e-26 124.0 206 35.0
DCAR_012114 Daucus carota HOM05D005320 ORTHO05D007922 2.9e-26 123.6 214 33.6
Prupe.6G259400 Prunus persica HOM05D005320 ORTHO05D007922 2.9e-26 123.6 208 34.6
unitig_21.g21010 Utricularia gibba HOM05D005320 ORTHO05D007922 2.9e-26 123.6 206 34.5
GSVIVG01034127001 Vitis vinifera HOM05D005320 ORTHO05D007922 2.9e-26 123.6 208 35.1
CiPaw.09G195900 Carya illinoinensis HOM05D005320 ORTHO05D007922 3.7e-26 123.2 208 35.1
Lj3A964T54 Lonicera japonica HOM05D005320 ORTHO05D007922 3.7e-26 123.2 204 35.3
Medtr4g020460 Medicago truncatula HOM05D005320 ORTHO05D007922 3.7e-26 123.2 208 35.1
Potri.016G100600 Populus trichocarpa HOM05D005320 ORTHO05D007922 3.7e-26 123.2 208 34.6
Zm00001eb124510 Zea mays HOM05D005320 ORTHO05D007922 3.7e-26 123.2 218 34.4
BraA04t18363Z Brassica rapa HOM05D005320 ORTHO05D007922 6.4e-26 122.5 210 33.3
CANSAT35G1431 Cannabis sativa HOM05D005320 ORTHO05D007922 6.4e-26 122.5 229 34.1
Ciclev10012735m.g Citrus clementina HOM05D005320 ORTHO05D007922 6.4e-26 122.5 223 32.7
Manes.09G092200 Manihot esculenta HOM05D005320 ORTHO05D007922 6.4e-26 122.5 208 35.1
Sp4g20060 Schrenkiella parvula HOM05D005320 ORTHO05D007922 6.4e-26 122.5 216 33.3
Aqoxy1G00876 Aquilegia oxysepala HOM05D005320 ORTHO05D007922 8.3e-26 122.1 206 34.0
BcaB06g29019 Brassica carinata HOM05D005320 ORTHO05D007922 8.3e-26 122.1 216 32.9
A04p28870 Brassica napus HOM05D005320 ORTHO05D007922 8.3e-26 122.1 216 32.9
BolC4t28116H Brassica oleracea HOM05D005320 ORTHO05D007922 8.3e-26 122.1 216 32.9
Lalb_Chr01g0013501 Lupinus albus HOM05D005320 ORTHO05D007922 8.3e-26 122.1 204 34.8
Aa31sc70G70 Aethionema arabicum HOM05D005320 ORTHO05D007922 1.1e-25 121.7 214 33.6
HanXRQChr13g0406901 Helianthus annuus HOM05D005320 ORTHO05D007922 1.1e-25 121.7 228 33.8
AL4G34610 Arabidopsis lyrata HOM05D005320 ORTHO05D007922 1.4e-25 121.3 216 33.3
AT2G37680 Arabidopsis thaliana HOM05D005320 ORTHO05D007922 1.4e-25 121.3 216 33.3
Thhalv10017226m.g Eutrema salsugineum HOM05D005320 ORTHO05D007922 1.4e-25 121.3 216 33.3
ECA248G2752 Erigeron canadensis HOM05D005320 ORTHO05D007922 1.9e-25 120.9 206 34.5
Sc07g0007050 Simmondsia chinensis HOM05D005320 ORTHO05D007922 1.9e-25 120.9 208 34.1
BcaC02g07499 Brassica carinata HOM05D005320 ORTHO05D007922 2.4e-25 120.6 216 33.3
C04p66130 Brassica napus HOM05D005320 ORTHO05D007922 2.4e-25 120.6 216 33.3
FvH4_6g13220 Fragaria vesca HOM05D005320 ORTHO05D007922 2.4e-25 120.6 208 34.6
Peaxi162Scf00094g00911 Petunia axillaris HOM05D005320 ORTHO05D007922 2.4e-25 120.6 197 35.5
FAN05G0090 Fragaria x ananassa HOM05D005320 ORTHO05D007922 3.2e-25 120.2 208 34.6
Nitab4.5_0005100g0070 Nicotiana tabacum HOM05D005320 ORTHO05D007922 3.2e-25 120.2 199 34.7
RcHm_v2.0_Chr3g0466001 Rosa chinensis HOM05D005320 ORTHO05D007922 3.2e-25 120.2 208 34.1
RcHm_v2.0_Chr3g0466041 Rosa chinensis HOM05D005320 ORTHO05D007922 3.2e-25 120.2 208 34.1
Gorai.012G105600 Gossypium raimondii HOM05D005320 ORTHO05D007922 4.1e-25 119.8 229 33.2
arahy.Tifrunner.gnm1.ann1.AE34S8 Arachis hypogaea HOM05D005320 ORTHO05D007922 5.4e-25 119.4 208 34.6
arahy.Tifrunner.gnm1.ann1.SHW8SI Arachis hypogaea HOM05D005320 ORTHO05D007922 5.4e-25 119.4 208 34.6
CARHR131860 Cardamine hirsuta HOM05D005320 ORTHO05D007922 5.4e-25 119.4 229 33.6
ATR0559G120 Amborella trichopoda HOM05D005320 ORTHO05D007922 7.0e-25 119.0 196 34.7
FAN02G2927 Fragaria x ananassa HOM05D005320 ORTHO05D007922 7.0e-25 119.0 208 34.1
FAN14G1919 Fragaria x ananassa HOM05D005320 ORTHO05D007922 7.0e-25 119.0 208 34.1
Pp3c6_13830 Physcomitrium patens HOM05D005320 ORTHO05D007922 7.0e-25 119.0 198 32.3
HPP92_026786 Vanilla planifolia HOM05D005320 ORTHO05D007922 7.0e-25 119.0 207 35.3
Atru.chr8.2015 Acer truncatum HOM05D005320 ORTHO05D007922 9.2e-25 118.6 208 33.7
Lsat_1_v5_gn_5_153940 Lactuca sativa HOM05D005320 ORTHO05D007922 9.2e-25 118.6 204 34.3
MBI05_g35634_MAGBIO Magnolia biondii HOM05D005320 ORTHO05D007922 9.2e-25 118.6 205 34.6
Carub.0004s1963 Capsella rubella HOM05D005320 ORTHO05D007922 1.6e-24 117.9 216 32.9
Dinv37147 Davidia involucrata HOM05D005320 ORTHO05D007922 1.6e-24 117.9 230 31.3
ClCG04G008030 Citrullus lanatus HOM05D005320 ORTHO05D007922 2.7e-24 117.1 205 34.1
CsaV3_4G025180 Cucumis sativus L. HOM05D005320 ORTHO05D007922 2.7e-24 117.1 205 34.1
CSS0000536 Camellia sinensis var. sinensis HOM05D005320 ORTHO05D007922 3.5e-24 116.7 208 34.1
COL.COLO4_14757 Corchorus olitorius HOM05D005320 ORTHO05D007922 4.6e-24 116.3 208 33.7
Phvul.010G015600 Phaseolus vulgaris HOM05D005320 ORTHO05D007922 6.0e-24 115.9 200 34.5
Duzib093G0721 Durio zibethinus HOM05D005320 ORTHO05D007922 1.0e-23 115.2 200 34.0
Atru.chr8.2014 Acer truncatum HOM05D005320 ORTHO05D007922 1.3e-23 114.8 209 34.0
Hma1.2p1_1082F.1_g255150 Hydrangea macrophylla HOM05D005320 ORTHO05D007922 2.3e-23 114.0 220 33.6
Sed0022090 Sechium edule HOM05D005320 ORTHO05D007922 3.9e-23 113.2 205 33.2
Duzib128G0467 Durio zibethinus HOM05D005320 ORTHO05D007922 1.5e-22 111.3 200 33.0
AUR62042382 Chenopodium quinoa HOM05D005320 ORTHO05D007922 7.3e-22 109.0 195 33.8
AUR62043523 Chenopodium quinoa HOM05D005320 ORTHO05D007922 7.3e-22 109.0 195 33.8
Cpa.g.c45575 Carica papaya HOM05D005320 ORTHO05D007922 1.2e-21 108.2 122 43.4
Sabra16G0101600 Salix brachista HOM05D005320 ORTHO05D007922 8.1e-21 105.5 121 43.0
EL10As1g23111 Beta vulgaris HOM05D005320 ORTHO05D007922 1.1e-20 105.1 121 43.0
Haze_20829 Corylus avellana HOM05D005320 ORTHO05D007922 1.1e-20 105.1 124 44.4
Oeu007799.1 Olea europaea HOM05D005320 ORTHO05D007922 1.4e-20 104.8 121 42.1
Zm00001eb335820 Zea mays HOM05D005320 ORTHO05D007922 1.8e-20 104.4 121 42.1
RcHm_v2.0_Chr3g0465971 Rosa chinensis HOM05D005320 ORTHO05D007922 8.9e-20 102.1 121 42.1
HPP92_000741 Vanilla planifolia HOM05D005320 ORTHO05D007922 1.3e-18 98.2 118 44.1
Hma1.2p1_0936F.1_g239015 Hydrangea macrophylla HOM05D005320 ORTHO05D007922 1.3e-15 88.2 199 30.7
Hma1.2p1_1082F.1_g255160 Hydrangea macrophylla HOM05D005320 ORTHO05D007922 1.3e-15 88.2 199 30.7
RcHm_v2.0_Chr3g0465901 Rosa chinensis HOM05D005320 ORTHO05D007922 6.8e-12 75.9 180 28.3
HPP92_000739 Vanilla planifolia HOM05D005320 ORTHO05D007922 2.4e-09 67.4 74 45.9
RcHm_v2.0_Chr3g0465921 Rosa chinensis HOM05D005320 ORTHO05D007922 6.0e-08 62.8 84 38.1


User provided reference genes

Program Settings