Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre17.g718650 Chlamydomonas reinhardtii HOM05D004497 ORTHO05D005539 3.5e-229 798.1 463 100.0
Mapoly0079s0016 Marchantia polymorpha HOM05D004497 ORTHO05D005539 5.2e-31 139.8 381 32.0
Pp3c13_24500 Physcomitrium patens HOM05D004497 ORTHO05D005539 8.4e-29 132.5 402 27.9
MD14G1161100 Malus domestica HOM05D004497 ORTHO05D005539 2.1e-27 127.9 380 27.6
PGR083G2085 Punica granatum HOM05D004497 ORTHO05D005539 3.5e-27 127.1 390 25.9
SGA_v2.0_scaffold215G42316 Striga asiatica HOM05D004497 ORTHO05D005539 6.0e-27 126.3 381 26.2
MCO03G018 Micromonas commoda HOM05D004497 ORTHO05D005539 7.8e-27 125.9 407 27.3
SMO165G0173 Selaginella moellendorffii HOM05D004497 ORTHO05D005539 1.7e-26 124.8 393 27.0
MSTRG.22910 Avicennia marina HOM05D004497 ORTHO05D005539 2.3e-26 124.4 392 27.6
Sabra15G0114200 Salix brachista HOM05D004497 ORTHO05D005539 5.1e-26 123.2 381 27.6
CsaV3_1G009480 Cucumis sativus L. HOM05D004497 ORTHO05D005539 6.6e-26 122.9 385 27.3
CSS0032894 Camellia sinensis var. sinensis HOM05D004497 ORTHO05D005539 8.6e-26 122.5 385 26.2
Thecc.03G125300 Theobroma cacao HOM05D004497 ORTHO05D005539 8.6e-26 122.5 385 27.3
SEGI_30468 Sequoiadendron giganteum HOM05D004497 ORTHO05D005539 1.1e-25 122.1 383 27.9
Migut.I00519 Erythranthe guttata HOM05D004497 ORTHO05D005539 1.5e-25 121.7 382 26.2
PSO782G0077 Papaver somniferum HOM05D004497 ORTHO05D005539 1.9e-25 121.3 397 28.2
PSO063G4711 Papaver somniferum HOM05D004497 ORTHO05D005539 3.3e-25 120.6 397 28.2
Potri.015G092400 Populus trichocarpa HOM05D004497 ORTHO05D005539 4.3e-25 120.2 381 27.3
ATR0171G018 Amborella trichopoda HOM05D004497 ORTHO05D005539 5.6e-25 119.8 384 27.1
CBR_g31949 Chara braunii HOM05D004497 ORTHO05D005539 5.6e-25 119.8 382 29.6
ECA246G4485 Erigeron canadensis HOM05D004497 ORTHO05D005539 5.6e-25 119.8 387 27.1
QL93p0225_0015 Quercus lobata HOM05D004497 ORTHO05D005539 5.6e-25 119.8 385 26.0
FAN04G2053 Fragaria x ananassa HOM05D004497 ORTHO05D005539 7.3e-25 119.4 383 27.9
MD06G1147200 Malus domestica HOM05D004497 ORTHO05D005539 7.3e-25 119.4 379 26.6
Potri.012G095100 Populus trichocarpa HOM05D004497 ORTHO05D005539 7.3e-25 119.4 387 27.6
QL07p000007 Quercus lobata HOM05D004497 ORTHO05D005539 7.3e-25 119.4 385 25.7
GSVIVG01013111001 Vitis vinifera HOM05D004497 ORTHO05D005539 9.6e-25 119.0 391 27.1
HanXRQChr05g0153981 Helianthus annuus HOM05D004497 ORTHO05D005539 1.6e-24 118.2 382 26.2
SalBow8G1477 Salvia bowleyana HOM05D004497 ORTHO05D005539 2.1e-24 117.9 387 26.1
Sed0020059 Sechium edule HOM05D004497 ORTHO05D005539 2.1e-24 117.9 390 26.2
SalBow5G0098 Salvia bowleyana HOM05D004497 ORTHO05D005539 2.8e-24 117.5 410 25.9
SalBow5G4825 Salvia bowleyana HOM05D004497 ORTHO05D005539 2.8e-24 117.5 410 25.9
Sopen08g004010 Solanum pennellii HOM05D004497 ORTHO05D005539 2.8e-24 117.5 380 25.5
EL10As4g23444 Beta vulgaris HOM05D004497 ORTHO05D005539 4.7e-24 116.7 381 27.0
Haze_07247 Corylus avellana HOM05D004497 ORTHO05D005539 4.7e-24 116.7 385 26.5
Thhalv10007651m.g Eutrema salsugineum HOM05D004497 ORTHO05D005539 4.7e-24 116.7 379 27.2
Lalb_Chr03g0040831 Lupinus albus HOM05D004497 ORTHO05D005539 4.7e-24 116.7 382 25.7
HPP92_023861 Vanilla planifolia HOM05D004497 ORTHO05D005539 6.2e-24 116.3 383 26.1
arahy.Tifrunner.gnm1.ann1.16KDXT Arachis hypogaea HOM05D004497 ORTHO05D005539 8.1e-24 115.9 380 26.1
A08p25140 Brassica napus HOM05D004497 ORTHO05D005539 8.1e-24 115.9 378 26.5
ClCG03G003620 Citrullus lanatus HOM05D004497 ORTHO05D005539 8.1e-24 115.9 391 25.8
FvH4_5g07760 Fragaria vesca HOM05D004497 ORTHO05D005539 8.1e-24 115.9 383 27.7
FAN08G0052 Fragaria x ananassa HOM05D004497 ORTHO05D005539 8.1e-24 115.9 380 26.8
arahy.Tifrunner.gnm1.ann1.0L2FVX Arachis hypogaea HOM05D004497 ORTHO05D005539 1.1e-23 115.5 380 26.1
RcHm_v2.0_Chr7g0190661 Rosa chinensis HOM05D004497 ORTHO05D005539 1.1e-23 115.5 383 27.4
FAN18G2816 Fragaria x ananassa HOM05D004497 ORTHO05D005539 1.4e-23 115.2 383 27.4
Solyc08g008160.4 Solanum lycopersicum HOM05D004497 ORTHO05D005539 1.4e-23 115.2 391 25.3
Atru.chr3.3406 Acer truncatum HOM05D004497 ORTHO05D005539 1.8e-23 114.8 381 25.2
Actinidia25597 Actinidia chinensis HOM05D004497 ORTHO05D005539 1.8e-23 114.8 382 25.4
CiPaw.08G116800 Carya illinoinensis HOM05D004497 ORTHO05D005539 2.4e-23 114.4 381 25.7
Lsat_1_v5_gn_5_13520 Lactuca sativa HOM05D004497 ORTHO05D005539 2.4e-23 114.4 385 26.2
Rhsim08G0187300 Rhododendron simsii HOM05D004497 ORTHO05D005539 2.4e-23 114.4 386 25.6
Cc05_g04600 Coffea canephora HOM05D004497 ORTHO05D005539 3.1e-23 114.0 382 26.2
Gorai.006G271300 Gossypium raimondii HOM05D004497 ORTHO05D005539 3.1e-23 114.0 384 27.3
Nitab4.5_0002978g0150 Nicotiana tabacum HOM05D004497 ORTHO05D005539 3.1e-23 114.0 385 24.7
C03p75750 Brassica napus HOM05D004497 ORTHO05D005539 4.0e-23 113.6 385 26.8
Cfa013402 Carpinus fangiana HOM05D004497 ORTHO05D005539 4.0e-23 113.6 381 26.0
PGSC0003DMG400005828 Solanum tuberosum HOM05D004497 ORTHO05D005539 4.0e-23 113.6 388 25.5
BcaC05g26958 Brassica carinata HOM05D004497 ORTHO05D005539 5.2e-23 113.2 376 26.3
C05p28100 Brassica napus HOM05D004497 ORTHO05D005539 5.2e-23 113.2 376 26.3
BolC3t19835H Brassica oleracea HOM05D004497 ORTHO05D005539 5.2e-23 113.2 377 25.7
BolC5t31537H Brassica oleracea HOM05D004497 ORTHO05D005539 5.2e-23 113.2 376 26.3
BraA09t39216Z Brassica rapa HOM05D004497 ORTHO05D005539 5.2e-23 113.2 377 25.5
TWI14G0260 Tripterygium wilfordii HOM05D004497 ORTHO05D005539 5.2e-23 113.2 379 25.6
BcaC01g00099 Brassica carinata HOM05D004497 ORTHO05D005539 6.9e-23 112.8 378 26.2
Nn4g26409 Nelumbo nucifera HOM05D004497 ORTHO05D005539 6.9e-23 112.8 380 25.3
Nitab4.5_0000903g0080 Nicotiana tabacum HOM05D004497 ORTHO05D005539 6.9e-23 112.8 385 24.4
QL10p004476 Quercus lobata HOM05D004497 ORTHO05D005539 6.9e-23 112.8 385 26.2
Carub.0001s2754 Capsella rubella HOM05D004497 ORTHO05D005539 9.0e-23 112.5 379 26.1
CARHR028640 Cardamine hirsuta HOM05D004497 ORTHO05D005539 9.0e-23 112.5 376 26.3
Zm00001eb105680 Zea mays HOM05D004497 ORTHO05D005539 1.5e-22 111.7 385 27.5
TPR.G34454 Trifolium pratense HOM05D004497 ORTHO05D005539 2.0e-22 111.3 374 23.8
Aqoxy5G03475 Aquilegia oxysepala HOM05D004497 ORTHO05D005539 2.6e-22 110.9 389 27.0
CDE08G0729 Ceratophyllum demersum HOM05D004497 ORTHO05D005539 2.6e-22 110.9 384 26.3
Duzib205G0501 Durio zibethinus HOM05D004497 ORTHO05D005539 2.6e-22 110.9 388 26.3
Lj9A476T57 Lonicera japonica HOM05D004497 ORTHO05D005539 2.6e-22 110.9 372 25.8
CANSAT56G3508 Cannabis sativa HOM05D004497 ORTHO05D005539 3.4e-22 110.5 386 26.4
Gohir.D09G246800 Gossypium hirsutum HOM05D004497 ORTHO05D005539 3.4e-22 110.5 385 27.3
THA.LOC104820611 Tarenaya hassleriana HOM05D004497 ORTHO05D005539 3.4e-22 110.5 381 25.7
Ah.08g212900 Amaranthus hybridus HOM05D004497 ORTHO05D005539 4.4e-22 110.2 385 26.5
BcaB03g12154 Brassica carinata HOM05D004497 ORTHO05D005539 5.8e-22 109.8 378 25.4
COL.COLO4_28066 Corchorus olitorius HOM05D004497 ORTHO05D005539 5.8e-22 109.8 383 26.9
Gohir.A12G276900 Gossypium hirsutum HOM05D004497 ORTHO05D005539 5.8e-22 109.8 386 27.5
Sp1g25270 Schrenkiella parvula HOM05D004497 ORTHO05D005539 5.8e-22 109.8 378 26.2
MBI11_g15865_MAGBIO Magnolia biondii HOM05D004497 ORTHO05D005539 7.6e-22 109.4 389 28.3
Ciclev10020238m.g Citrus clementina HOM05D004497 ORTHO05D005539 9.9e-22 109.0 381 25.2
MELO3C002347.2 Cucumis melo HOM05D004497 ORTHO05D005539 9.9e-22 109.0 372 26.3
Peaxi162Scf00078g00424 Petunia axillaris HOM05D004497 ORTHO05D005539 1.3e-21 108.6 374 24.9
Psat3g028160 Pisum sativum HOM05D004497 ORTHO05D005539 1.3e-21 108.6 379 24.0
TAR625G0069 Trochodendron aralioides HOM05D004497 ORTHO05D005539 1.3e-21 108.6 385 27.3
Gohir.A09G246200 Gossypium hirsutum HOM05D004497 ORTHO05D005539 1.7e-21 108.2 382 27.0
Sc10g0010400 Simmondsia chinensis HOM05D004497 ORTHO05D005539 1.7e-21 108.2 386 26.2
Aa31LG6G6220 Aethionema arabicum HOM05D004497 ORTHO05D005539 3.8e-21 107.1 380 25.8
AT1G29320 Arabidopsis thaliana HOM05D004497 ORTHO05D005539 3.8e-21 107.1 379 25.9
Lj1g0020744 Lotus japonicus HOM05D004497 ORTHO05D005539 3.8e-21 107.1 383 25.8
Ca_04603_v3 Cicer arietinum L. HOM05D004497 ORTHO05D005539 4.9e-21 106.7 379 23.2
vmacro20468 Vaccinium macrocarpon HOM05D004497 ORTHO05D005539 4.9e-21 106.7 396 24.7
A09p36980 Brassica napus HOM05D004497 ORTHO05D005539 6.4e-21 106.3 398 25.9
QL04p081834 Quercus lobata HOM05D004497 ORTHO05D005539 6.4e-21 106.3 399 25.6
Eucgr.C01065 Eucalyptus grandis HOM05D004497 ORTHO05D005539 8.4e-21 105.9 379 25.1
AL1G43130 Arabidopsis lyrata HOM05D004497 ORTHO05D005539 1.4e-20 105.1 379 25.9
Ca_09070_v3 Cicer arietinum L. HOM05D004497 ORTHO05D005539 1.4e-20 105.1 374 23.3
Manes.14G053800 Manihot esculenta HOM05D004497 ORTHO05D005539 1.4e-20 105.1 389 27.0
AagrBONN_evm.TU.Sc2ySwM_344.3271 Anthoceros agrestis HOM05D000006 ORTHO05D004030 1.9e-20 104.8 330 27.3
THA.LOC104814264 Tarenaya hassleriana HOM05D004497 ORTHO05D005539 1.9e-20 104.8 381 25.5
Eucgr.K00186 Eucalyptus grandis HOM05D004497 ORTHO05D005539 2.4e-20 104.4 385 25.5
TAR629G1275 Trochodendron aralioides HOM05D004497 ORTHO05D005539 3.2e-20 104.0 390 26.2
BcaB07g32523 Brassica carinata HOM05D004497 ORTHO05D005539 4.2e-20 103.6 378 24.3
Dinv04858 Davidia involucrata HOM05D004497 ORTHO05D005539 9.3e-20 102.4 361 25.8
DCAR_012679 Daucus carota HOM05D004497 ORTHO05D005539 1.2e-19 102.1 365 25.5
BraA08t34469Z Brassica rapa HOM05D004497 ORTHO05D005539 1.6e-19 101.7 405 25.2
Hund03342 Selenicereus undatus HOM05D004497 ORTHO05D005539 1.6e-19 101.7 381 24.9
FAN13G1359 Fragaria x ananassa HOM05D004497 ORTHO05D005539 3.5e-19 100.5 390 26.2
Medtr7g106650 Medicago truncatula HOM05D004497 ORTHO05D005539 3.5e-19 100.5 383 23.0
Oeu005018.3 Olea europaea HOM05D004497 ORTHO05D005539 6.0e-19 99.8 421 24.2
PRCOL_00003967 Prasinoderma coloniale HOM05D004497 ORTHO05D005539 6.0e-19 99.8 328 27.1
Dinv11148 Davidia involucrata HOM05D004497 ORTHO05D005539 1.7e-18 98.2 347 25.4
CiPaw.11G010200 Carya illinoinensis HOM05D004497 ORTHO05D005539 2.3e-18 97.8 264 26.1
Prupe.1G584300 Prunus persica HOM05D004497 ORTHO05D005539 6.6e-18 96.3 379 26.4
Sed0003097 Sechium edule HOM05D004497 ORTHO05D005539 8.7e-18 95.9 268 26.5
Phvul.003G017500 Phaseolus vulgaris HOM05D004497 ORTHO05D005539 2.5e-17 94.4 375 24.3
unitig_699.g19657 Utricularia gibba HOM05D004497 ORTHO05D005539 3.3e-17 94.0 217 27.2
Glyma.16G034400 Glycine max HOM05D004497 ORTHO05D005539 7.3e-17 92.8 386 24.6
SHI10599 Sapria himalayana HOM05D004497 ORTHO05D005539 1.3e-16 92.0 347 25.1
Glyma.07G068400 Glycine max HOM05D004497 ORTHO05D005539 1.6e-16 91.7 375 24.0
VMungo0331G1674 Vigna mungo HOM05D004497 ORTHO05D005539 2.1e-16 91.3 372 25.0
AUR62032705 Chenopodium quinoa HOM05D004497 ORTHO05D005539 5.3e-15 86.7 245 26.1
TWI39G1139 Tripterygium wilfordii HOM05D004497 ORTHO05D005539 1.2e-14 85.5 409 24.0
Zm00001eb322320 Zea mays HOM05D004497 ORTHO05D005539 2.0e-14 84.7 198 26.8
SalBow8G1815 Salvia bowleyana HOM05D004497 ORTHO05D005539 1.2e-11 75.5 120 35.8
Sabra12G0069700 Salix brachista HOM05D004497 ORTHO05D005539 4.6e-11 73.6 318 23.3
Aqoxy5G03495 Aquilegia oxysepala HOM05D004497 ORTHO05D005539 1.0e-10 72.4 326 23.6
vmacro19222 Vaccinium macrocarpon HOM05D004497 ORTHO05D005539 1.9e-09 68.2 181 25.4
Cfa014010 Carpinus fangiana HOM05D004497 ORTHO05D005539 4.5e-06 57.0 109 33.0


User provided reference genes

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