Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre17.g698950 Chlamydomonas reinhardtii HOM05D006522 ORTHO05D008183 3.2e-178 628.6 401 100.0
Lalb_Chr12g0203641 Lupinus albus HOM05D006522 ORTHO05D008183 1.2e-55 221.5 181 56.9
MCO11G860 Micromonas commoda HOM05D006522 ORTHO05D008183 1.5e-55 221.1 174 59.2
Nitab4.5_0003396g0010 Nicotiana tabacum HOM05D006522 ORTHO05D008183 2.6e-55 220.3 185 56.8
CAN.G1550.13 Capsicum annuum HOM05D006522 ORTHO05D008183 4.5e-55 219.5 166 59.6
Nitab4.5_0001027g0010 Nicotiana tabacum HOM05D006522 ORTHO05D008183 4.5e-55 219.5 185 55.7
HanXRQChr14g0446011 Helianthus annuus HOM05D006522 ORTHO05D008183 7.7e-55 218.8 187 54.0
AUR62004203 Chenopodium quinoa HOM05D006522 ORTHO05D008183 1.0e-54 218.4 166 59.6
CiPaw.04G095200 Carya illinoinensis HOM05D006522 ORTHO05D008183 1.7e-54 217.6 166 59.6
Gohir.D03G044300 Gossypium hirsutum HOM05D006522 ORTHO05D008183 1.7e-54 217.6 179 56.4
Mapoly0168s0016 Marchantia polymorpha HOM05D006522 ORTHO05D008183 1.7e-54 217.6 194 54.6
AUR62013645 Chenopodium quinoa HOM05D006522 ORTHO05D008183 2.2e-54 217.2 166 59.0
Gohir.A02G132900 Gossypium hirsutum HOM05D006522 ORTHO05D008183 2.2e-54 217.2 179 55.9
Thecc.01G107900 Theobroma cacao HOM05D006522 ORTHO05D008183 2.2e-54 217.2 179 55.9
VMungo0251G3519 Vigna mungo HOM05D006522 ORTHO05D008183 2.2e-54 217.2 180 56.1
Phvul.002G262800 Phaseolus vulgaris HOM05D006522 ORTHO05D008183 2.9e-54 216.9 187 52.9
THA.LOC104819310 Tarenaya hassleriana HOM05D006522 ORTHO05D008183 3.8e-54 216.5 209 53.6
FvH4_1g21690 Fragaria vesca HOM05D006522 ORTHO05D008183 1.1e-53 214.9 166 59.0
Glyma.05G181800 Glycine max HOM05D006522 ORTHO05D008183 1.4e-53 214.5 166 59.6
TWI53G0226 Tripterygium wilfordii HOM05D006522 ORTHO05D008183 1.4e-53 214.5 241 47.3
MSTRG.23326 Avicennia marina HOM05D006522 ORTHO05D008183 1.9e-53 214.2 166 59.6
ECA238G0371 Erigeron canadensis HOM05D006522 ORTHO05D008183 1.9e-53 214.2 186 54.8
arahy.Tifrunner.gnm1.ann1.8IYW0J Arachis hypogaea HOM05D006522 ORTHO05D008183 2.5e-53 213.8 202 53.5
Lj4g0021245 Lotus japonicus HOM05D006522 ORTHO05D008183 3.2e-53 213.4 166 57.8
Os03g0195200 Oryza sativa ssp. japonica HOM05D006522 ORTHO05D008183 3.2e-53 213.4 207 52.7
Sopen05g033820 Solanum pennellii HOM05D006522 ORTHO05D008183 3.2e-53 213.4 204 50.5
BraA10t44795Z Brassica rapa HOM05D006522 ORTHO05D008183 4.2e-53 213.0 187 53.5
PGSC0003DMG400023383 Solanum tuberosum HOM05D006522 ORTHO05D008183 4.2e-53 213.0 217 49.8
Aa31LG3G17070 Aethionema arabicum HOM05D006522 ORTHO05D008183 5.5e-53 212.6 166 57.8
Hma1.2p1_0070F.1_g037610 Hydrangea macrophylla HOM05D006522 ORTHO05D008183 5.5e-53 212.6 166 57.2
BcaB08g37142 Brassica carinata HOM05D006522 ORTHO05D008183 7.2e-53 212.2 165 58.2
MD15G1329600 Malus domestica HOM05D006522 ORTHO05D008183 7.2e-53 212.2 229 48.9
Ah.05g174330 Amaranthus hybridus HOM05D006522 ORTHO05D008183 9.4e-53 211.8 192 52.6
CBR_g22385 Chara braunii HOM05D006522 ORTHO05D008183 9.4e-53 211.8 203 53.2
Glyma.08G139500 Glycine max HOM05D006522 ORTHO05D008183 1.2e-52 211.5 180 54.4
Potri.005G080300 Populus trichocarpa HOM05D006522 ORTHO05D008183 1.2e-52 211.5 165 57.6
SGA_v2.0_scaffold2G01317 Striga asiatica HOM05D006522 ORTHO05D008183 1.2e-52 211.5 171 59.1
BcaC04g19347 Brassica carinata HOM05D006522 ORTHO05D008183 2.1e-52 210.7 165 57.0
C09p67500 Brassica napus HOM05D006522 ORTHO05D008183 2.1e-52 210.7 165 57.0
BolC9t59510H Brassica oleracea HOM05D006522 ORTHO05D008183 2.1e-52 210.7 165 57.0
Psat7g053400 Pisum sativum HOM05D006522 ORTHO05D008183 2.1e-52 210.7 166 57.2
CANSAT01G1323 Cannabis sativa HOM05D006522 ORTHO05D008183 3.6e-52 209.9 235 47.2
Duzib187G0580 Durio zibethinus HOM05D006522 ORTHO05D008183 3.6e-52 209.9 179 54.7
Oeu028389.1 Olea europaea HOM05D006522 ORTHO05D008183 3.6e-52 209.9 166 58.4
RcHm_v2.0_Chr2g0115571 Rosa chinensis HOM05D006522 ORTHO05D008183 3.6e-52 209.9 215 50.2
Sp6g33330 Schrenkiella parvula HOM05D006522 ORTHO05D008183 3.6e-52 209.9 166 56.6
EL10Ac1g00879 Beta vulgaris HOM05D006522 ORTHO05D008183 4.7e-52 209.5 215 51.6
Medtr8g091510 Medicago truncatula HOM05D006522 ORTHO05D008183 6.1e-52 209.1 166 57.2
HPP92_027257 Vanilla planifolia HOM05D006522 ORTHO05D008183 6.1e-52 209.1 220 51.8
Zm00001eb401110 Zea mays HOM05D006522 ORTHO05D008183 7.9e-52 208.8 174 55.2
CSS0003121 Camellia sinensis var. sinensis HOM05D006522 ORTHO05D008183 1.0e-51 208.4 192 53.6
Haze_26963 Corylus avellana HOM05D006522 ORTHO05D008183 1.0e-51 208.4 164 56.7
Cc00_g21690 Coffea canephora HOM05D006522 ORTHO05D008183 1.8e-51 207.6 244 47.1
Sc23g0003650 Simmondsia chinensis HOM05D006522 ORTHO05D008183 1.8e-51 207.6 222 49.5
Sed0017006 Sechium edule HOM05D006522 ORTHO05D008183 3.0e-51 206.8 216 50.5
PRCOL_00002914 Prasinoderma coloniale HOM05D006522 ORTHO05D008183 5.2e-51 206.1 168 57.1
FAN26G1180 Fragaria x ananassa HOM05D006522 ORTHO05D008183 6.7e-51 205.7 180 54.4
PSO675G0908 Papaver somniferum HOM05D006522 ORTHO05D008183 6.7e-51 205.7 241 46.9
Thhalv10014396m.g Eutrema salsugineum HOM05D006522 ORTHO05D008183 1.1e-50 204.9 231 47.6
Carub.0006s0853 Capsella rubella HOM05D006522 ORTHO05D008183 1.5e-50 204.5 217 49.8
Eucgr.I00376 Eucalyptus grandis HOM05D006522 ORTHO05D008183 1.5e-50 204.5 201 50.7
PSO541G5899 Papaver somniferum HOM05D006522 ORTHO05D008183 1.5e-50 204.5 215 50.7
Pp3c17_17150 Physcomitrium patens HOM05D006522 ORTHO05D008183 1.5e-50 204.5 216 50.9
AL6G20520 Arabidopsis lyrata HOM05D006522 ORTHO05D008183 2.0e-50 204.1 237 48.5
Ca_17709_v3 Cicer arietinum L. HOM05D006522 ORTHO05D008183 4.4e-50 203.0 166 53.6
Prupe.6G178600 Prunus persica HOM05D006522 ORTHO05D008183 4.4e-50 203.0 163 57.7
TPR.G2232 Trifolium pratense HOM05D006522 ORTHO05D008183 5.7e-50 202.6 166 56.0
Dinv16321 Davidia involucrata HOM05D006522 ORTHO05D008183 9.7e-50 201.8 177 55.4
Ciclev10027591m.g Citrus clementina HOM05D006522 ORTHO05D008183 1.7e-49 201.1 211 50.2
MELO3C017578.2 Cucumis melo HOM05D006522 ORTHO05D008183 2.8e-49 200.3 189 52.9
Migut.H02394 Erythranthe guttata HOM05D006522 ORTHO05D008183 4.8e-49 199.5 166 57.2
CARHR203220 Cardamine hirsuta HOM05D006522 ORTHO05D008183 1.1e-48 198.4 160 55.6
A10p27440 Brassica napus HOM05D006522 ORTHO05D008183 7.0e-48 195.7 193 50.3
AT5G10070 Arabidopsis thaliana HOM05D006522 ORTHO05D008183 1.2e-47 194.9 161 57.8
AUR62013648 Chenopodium quinoa HOM05D006522 ORTHO05D008183 3.5e-47 193.4 151 59.6
Gorai.003G045400 Gossypium raimondii HOM05D006522 ORTHO05D008183 4.5e-47 193.0 179 53.1
ECA238G2930 Erigeron canadensis HOM05D006522 ORTHO05D008183 7.7e-47 192.2 161 55.9
TAR376G0333 Trochodendron aralioides HOM05D006522 ORTHO05D008183 7.7e-47 192.2 222 45.5
ATR0564G484 Amborella trichopoda HOM05D006522 ORTHO05D008183 1.3e-46 191.4 225 48.0
SMO139G0021 Selaginella moellendorffii HOM05D006522 ORTHO05D008183 2.9e-46 190.3 160 52.5
GSVIVG01022189001 Vitis vinifera HOM05D006522 ORTHO05D008183 2.9e-46 190.3 253 43.5
QL06p050567 Quercus lobata HOM05D006522 ORTHO05D008183 1.1e-45 188.3 218 44.5
Actinidia28878 Actinidia chinensis HOM05D001075 ORTHO05D008183 2.5e-45 187.2 245 42.4
Manes.13G077900 Manihot esculenta HOM05D006522 ORTHO05D008183 2.5e-45 187.2 248 43.1
arahy.Tifrunner.gnm1.ann1.2EL0K0 Arachis hypogaea HOM05D006522 ORTHO05D008183 4.0e-43 179.9 138 60.9
SalBow3G1116 Salvia bowleyana HOM05D006522 ORTHO05D008183 9.7e-42 175.3 138 59.4
Nn5g28991 Nelumbo nucifera HOM05D006522 ORTHO05D008183 1.3e-41 174.9 141 58.2
FAN19G2878 Fragaria x ananassa HOM05D006522 ORTHO05D008183 1.7e-41 174.5 138 59.4
Rhsim10G0156200 Rhododendron simsii HOM05D006522 ORTHO05D008183 2.2e-41 174.1 287 37.3
vmacro12933 Vaccinium macrocarpon HOM05D006522 ORTHO05D008183 2.8e-41 173.7 252 40.9
CsaV3_UNG186480 Cucumis sativus L. HOM05D006522 ORTHO05D008183 3.7e-41 173.3 140 57.1
Aqoxy6G00537 Aquilegia oxysepala HOM05D006522 ORTHO05D008183 6.3e-41 172.6 150 55.3
COL.COLO4_11046 Corchorus olitorius HOM05D006522 ORTHO05D008183 1.8e-40 171.0 174 49.4
Hma1.2p1_0070F.1_g037620 Hydrangea macrophylla HOM05D006522 ORTHO05D008183 1.8e-40 171.0 138 57.2
Sabra05G0065900 Salix brachista HOM05D006522 ORTHO05D008183 2.4e-40 170.6 137 56.9
PGR004G1063 Punica granatum HOM05D006522 ORTHO05D008183 4.1e-40 169.9 187 48.1
unitig_736.g22572 Utricularia gibba HOM05D006522 ORTHO05D008183 5.3e-40 169.5 166 51.2
Atru.chr4.281 Acer truncatum HOM05D006522 ORTHO05D008183 1.2e-39 168.3 222 44.6
Cfa002723 Carpinus fangiana HOM05D006522 ORTHO05D008183 4.5e-39 166.4 126 60.3
Lsat_1_v5_gn_2_67761 Lactuca sativa HOM05D006522 ORTHO05D008183 4.5e-39 166.4 188 46.8
Cfa022135 Carpinus fangiana HOM05D006522 ORTHO05D008183 7.7e-39 165.6 167 47.3
Lj2A556G28 Lonicera japonica HOM05D006522 ORTHO05D008183 1.6e-36 157.9 192 47.4
BcaB08g37140 Brassica carinata HOM05D006522 ORTHO05D008183 1.8e-35 154.5 124 56.5
Psat7g089320 Pisum sativum HOM05D006522 ORTHO05D008183 1.8e-32 144.4 143 51.0
ClCG09G014260 Citrullus lanatus HOM05D006522 ORTHO05D008183 8.6e-22 109.0 196 36.2
MD01G1023100 Malus domestica HOM05D006522 ORTHO05D008183 9.8e-18 95.5 82 53.7
CDE10G0337 Ceratophyllum demersum HOM05D006522 ORTHO05D008183 6.4e-17 92.8 178 38.8
Haze_24999 Corylus avellana HOM05D006522 ORTHO05D008183 7.0e-16 89.4 113 42.5
SEGI_11019 Sequoiadendron giganteum HOM05D006522 ORTHO05D008183 1.0e-14 85.5 55 69.1
SEGI_36547 Sequoiadendron giganteum HOM05D006522 ORTHO05D008183 1.6e-12 78.2 88 48.9
SHI11626 Sapria himalayana HOM05D006522 ORTHO05D008183 5.2e-11 73.2 59 54.2
AUR62004200 Chenopodium quinoa HOM05D006522 ORTHO05D008183 2.0e-10 71.2 164 31.7
MD01G1023200 Malus domestica HOM05D006522 ORTHO05D008183 4.4e-10 70.1 64 54.7


User provided reference genes

Program Settings