Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre16.g677600 Chlamydomonas reinhardtii HOM05D006598 ORTHO05D008132 2.9e-229 798.5 499 100.0
MCO09G151 Micromonas commoda HOM05D006598 ORTHO05D008132 3.1e-13 80.9 224 31.2
Cre16.g655900 Chlamydomonas reinhardtii HOM05D006598 ORTHO05D008132 4.6e-09 67.0 194 29.4
CBR_g22328 Chara braunii HOM05D006598 ORTHO05D008132 6.7e-08 63.2 255 27.8
Cc10_g02850 Coffea canephora HOM05D006598 ORTHO05D008132 6.7e-08 63.2 148 27.7
vmacro04528 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 2.0e-07 61.6 170 27.1
CSS0013932 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 3.3e-07 60.8 214 26.6
THA.LOC104806941 Tarenaya hassleriana HOM05D006598 ORTHO05D008132 4.4e-07 60.5 216 26.9
Sabra02G0198100 Salix brachista HOM05D006598 ORTHO05D008132 5.7e-07 60.1 168 29.8
Rhsim07G0239600 Rhododendron simsii HOM05D006598 ORTHO05D008132 7.4e-07 59.7 170 27.1
SalBow7G0748 Salvia bowleyana HOM05D006598 ORTHO05D008132 7.4e-07 59.7 149 31.5
Migut.C00732 Erythranthe guttata HOM05D006598 ORTHO05D008132 9.7e-07 59.3 148 29.7
Psat5g017160 Pisum sativum HOM05D006598 ORTHO05D008132 9.7e-07 59.3 152 30.9
Hund26575 Selenicereus undatus HOM05D006598 ORTHO05D008132 1.3e-06 58.9 169 29.0
Carub.0008s0618 Capsella rubella HOM05D006598 ORTHO05D008132 1.7e-06 58.5 171 28.7
Dinv36084 Davidia involucrata HOM05D006598 ORTHO05D008132 1.7e-06 58.5 169 27.8
Thhalv10003240m.g Eutrema salsugineum HOM05D006598 ORTHO05D008132 1.7e-06 58.5 171 29.2
Sp2g07390 Schrenkiella parvula HOM05D006598 ORTHO05D008132 1.7e-06 58.5 173 30.6
BcaC02g10811 Brassica carinata HOM05D006598 ORTHO05D008132 2.8e-06 57.8 173 30.1
C04p24910 Brassica napus HOM05D006598 ORTHO05D008132 2.8e-06 57.8 173 30.1
BolC4t23991H Brassica oleracea HOM05D006598 ORTHO05D008132 2.8e-06 57.8 173 30.1
CDE06G0448 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 2.8e-06 57.8 155 27.1
SEGI_39292 Sequoiadendron giganteum HOM05D006598 ORTHO05D008132 2.8e-06 57.8 166 27.7
Solyc04g080380.3 Solanum lycopersicum HOM05D006598 ORTHO05D008132 2.8e-06 57.8 152 28.9
Aa31LG9G12810 Aethionema arabicum HOM05D006598 ORTHO05D008132 3.7e-06 57.4 171 29.8
CSS0023084 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 3.7e-06 57.4 215 26.0
CARHR181720 Cardamine hirsuta HOM05D006598 ORTHO05D008132 3.7e-06 57.4 216 26.9
Potri.002G260300 Populus trichocarpa HOM05D006598 ORTHO05D008132 3.7e-06 57.4 168 29.2
Actinidia38007 Actinidia chinensis HOM05D006598 ORTHO05D008132 4.8e-06 57.0 169 28.4
AagrBONN_evm.TU.Sc2ySwM_228.3129 Anthoceros agrestis HOM05D006598 ORTHO05D008132 6.3e-06 56.6 172 29.1
AT5G42760 Arabidopsis thaliana HOM05D006598 ORTHO05D008132 6.3e-06 56.6 216 26.4
BcaC06g31749 Brassica carinata HOM05D006598 ORTHO05D008132 6.3e-06 56.6 171 29.8
TWI36G0987 Tripterygium wilfordii HOM05D006598 ORTHO05D008132 6.3e-06 56.6 169 27.2
AL8G18360 Arabidopsis lyrata HOM05D006598 ORTHO05D008132 8.2e-06 56.2 171 28.1
A06p48250 Brassica napus HOM05D006598 ORTHO05D008132 8.2e-06 56.2 173 29.5
BraA06t27693Z Brassica rapa HOM05D006598 ORTHO05D008132 8.2e-06 56.2 173 29.5
HPP92_018704 Vanilla planifolia HOM05D006598 ORTHO05D008132 8.2e-06 56.2 152 27.0


User provided reference genes

Program Settings