Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre16.g673729 Chlamydomonas reinhardtii HOM05D002686 ORTHO05D006568 8.8e-61 236.9 129 100.0
Os02g0781400 Oryza sativa ssp. japonica HOM05D002686 ORTHO05D003222 1.6e-09 66.6 126 40.5
Aa31LG4G13060 Aethionema arabicum HOM05D002686 ORTHO05D003222 4.6e-09 65.1 116 40.5
HPP92_010942 Vanilla planifolia HOM05D002686 ORTHO05D003222 1.0e-08 63.9 116 40.5
EL10Ac8g19011 Beta vulgaris HOM05D002686 ORTHO05D003222 1.7e-08 63.2 116 41.4
BolC9t58407H Brassica oleracea HOM05D002686 ORTHO05D003222 1.7e-08 63.2 116 40.5
C09p55460 Brassica napus HOM05D002686 ORTHO05D003222 2.3e-08 62.8 116 40.5
Sabra18G0055000 Salix brachista HOM05D002686 ORTHO05D003222 2.3e-08 62.8 116 41.4
A10p19300 Brassica napus HOM05D002686 ORTHO05D003222 3.0e-08 62.4 116 40.5
Gohir.A09G207600 Gossypium hirsutum HOM05D002686 ORTHO05D003222 3.0e-08 62.4 116 40.5
BcaB01g04773 Brassica carinata HOM05D002686 ORTHO05D003222 5.0e-08 61.6 116 38.8
A03p10230 Brassica napus HOM05D002686 ORTHO05D003222 5.0e-08 61.6 116 38.8
BolC3t13645H Brassica oleracea HOM05D002686 ORTHO05D003222 5.0e-08 61.6 116 38.8
BraA03t10332Z Brassica rapa HOM05D002686 ORTHO05D003222 5.0e-08 61.6 116 38.8
Thhalv10014202m.g Eutrema salsugineum HOM05D002686 ORTHO05D003222 5.0e-08 61.6 134 35.1
Nitab4.5_0001092g0010 Nicotiana tabacum HOM05D002686 ORTHO05D003222 6.6e-08 61.2 116 39.7
Psat1g135800 Pisum sativum HOM05D002686 ORTHO05D003222 6.6e-08 61.2 116 39.7
Aa31LG1G13960 Aethionema arabicum HOM05D002686 ORTHO05D003222 8.6e-08 60.8 134 35.8
BNapus_Darmor_BZH_scaffold_38p01360 Brassica napus HOM05D002686 ORTHO05D003222 8.6e-08 60.8 134 35.1
BraA10t44007Z Brassica rapa HOM05D002686 ORTHO05D003222 8.6e-08 60.8 116 39.7
Dinv42419 Davidia involucrata HOM05D002686 ORTHO05D003222 8.6e-08 60.8 116 40.5
Rhsim05G0004300 Rhododendron simsii HOM05D002686 ORTHO05D003222 8.6e-08 60.8 134 37.3
AL6G32280 Arabidopsis lyrata HOM05D002686 ORTHO05D003222 1.1e-07 60.5 134 35.8
AT5G20720 Arabidopsis thaliana HOM05D002686 ORTHO05D003222 1.1e-07 60.5 134 35.8
BcaC04g19463 Brassica carinata HOM05D002686 ORTHO05D003222 1.1e-07 60.5 136 34.6
CARHR192090 Cardamine hirsuta HOM05D002686 ORTHO05D003222 1.1e-07 60.5 134 36.6
Potri.018G063200 Populus trichocarpa HOM05D002686 ORTHO05D003222 1.1e-07 60.5 116 40.5
vmacro17102 Vaccinium macrocarpon HOM05D002686 ORTHO05D003222 1.1e-07 60.5 116 39.7
A02p06460 Brassica napus HOM05D002686 ORTHO05D003222 1.5e-07 60.1 134 35.8
Duzib187G0525 Durio zibethinus HOM05D002686 ORTHO05D003222 1.5e-07 60.1 132 37.9
Gohir.D06G078000 Gossypium hirsutum HOM05D002686 ORTHO05D003222 1.9e-07 59.7 110 40.0
Gorai.010G091000 Gossypium raimondii HOM05D002686 ORTHO05D003222 1.9e-07 59.7 110 40.0
BcaB05g22817 Brassica carinata HOM05D002686 ORTHO05D003222 2.5e-07 59.3 134 34.3
COL.COLO4_21229 Corchorus olitorius HOM05D002686 ORTHO05D003222 2.5e-07 59.3 110 40.0
Gohir.A06G078700 Gossypium hirsutum HOM05D002686 ORTHO05D003222 2.5e-07 59.3 116 38.8
Gohir.A07G016300 Gossypium hirsutum HOM05D002686 ORTHO05D003222 2.5e-07 59.3 116 37.9
Gohir.D07G016100 Gossypium hirsutum HOM05D002686 ORTHO05D003222 2.5e-07 59.3 116 37.9
Gorai.001G016900 Gossypium raimondii HOM05D002686 ORTHO05D003222 2.5e-07 59.3 116 37.9
Hund06821 Selenicereus undatus HOM05D002686 ORTHO05D003222 2.5e-07 59.3 133 37.6
Zm00001eb373960 Zea mays HOM05D002686 ORTHO05D003222 2.5e-07 59.3 139 33.8
ATR0681G200 Amborella trichopoda HOM05D002686 ORTHO05D003222 3.3e-07 58.9 158 36.1
Lalb_Chr08g0232741 Lupinus albus HOM05D002686 ORTHO05D003222 3.3e-07 58.9 115 37.4
Lalb_Chr13g0299321 Lupinus albus HOM05D002686 ORTHO05D003222 3.3e-07 58.9 102 37.3
Peaxi162Scf00547g00069 Petunia axillaris HOM05D002686 ORTHO05D003222 3.3e-07 58.9 116 38.8
MELO3C015544.2 Cucumis melo HOM05D002686 ORTHO05D003222 4.3e-07 58.5 115 39.1
Lj6g0009278 Lotus japonicus HOM05D002686 ORTHO05D003222 4.3e-07 58.5 126 37.3
Sp6g23760 Schrenkiella parvula HOM05D002686 ORTHO05D003222 4.3e-07 58.5 134 35.1
TWI63G0210 Tripterygium wilfordii HOM05D002686 ORTHO05D003222 4.3e-07 58.5 116 39.7
BcaC03g13794 Brassica carinata HOM05D002686 ORTHO05D003222 5.6e-07 58.2 134 34.3
BolC2t07068H Brassica oleracea HOM05D002686 ORTHO05D003222 5.6e-07 58.2 134 34.3
AUR62025283 Chenopodium quinoa HOM05D002686 ORTHO05D003222 5.6e-07 58.2 116 39.7
AUR62028287 Chenopodium quinoa HOM05D002686 ORTHO05D003222 5.6e-07 58.2 116 39.7
Ca_02236_v3 Cicer arietinum L. HOM05D002686 ORTHO05D003222 5.6e-07 58.2 126 36.5
FvH4_1g09160 Fragaria vesca HOM05D002686 ORTHO05D003222 5.6e-07 58.2 85 42.4
FAN19G1751 Fragaria x ananassa HOM05D002686 ORTHO05D003222 5.6e-07 58.2 85 42.4
FAN26G1050 Fragaria x ananassa HOM05D002686 ORTHO05D003222 5.6e-07 58.2 85 42.4
FAN26G3337 Fragaria x ananassa HOM05D002686 ORTHO05D003222 5.6e-07 58.2 85 42.4
FAN28G1135 Fragaria x ananassa HOM05D002686 ORTHO05D003222 5.6e-07 58.2 85 42.4
Mapoly0014s0158 Marchantia polymorpha HOM05D002686 ORTHO05D003222 5.6e-07 58.2 132 32.6
SalBow6G2263 Salvia bowleyana HOM05D002686 ORTHO05D003222 5.6e-07 58.2 116 38.8
Thecc.09G072400 Theobroma cacao HOM05D002686 ORTHO05D003222 5.6e-07 58.2 128 35.9
VMungo1215G1076 Vigna mungo HOM05D002686 ORTHO05D003222 5.6e-07 58.2 132 37.9
Ciclev10009281m.g Citrus clementina HOM05D002686 ORTHO05D003222 7.3e-07 57.8 134 35.8
Lsat_1_v5_gn_2_39021 Lactuca sativa HOM05D002686 ORTHO05D003222 7.3e-07 57.8 116 39.7
Nitab4.5_0009109g0010 Nicotiana tabacum HOM05D002686 ORTHO05D003222 7.3e-07 57.8 121 37.2
Sc18g0002740 Simmondsia chinensis HOM05D002686 ORTHO05D003222 7.3e-07 57.8 113 38.1
Lalb_Chr11g0074101 Lupinus albus HOM05D002686 ORTHO05D003222 9.5e-07 57.4 126 36.5
RcHm_v2.0_Chr2g0095561 Rosa chinensis HOM05D002686 ORTHO05D003222 9.5e-07 57.4 85 41.2
CBR_g23279 Chara braunii HOM05D002686 ORTHO05D003222 1.2e-06 57.0 102 41.2
Haze_27283 Corylus avellana HOM05D002686 ORTHO05D034607 1.2e-06 57.0 91 34.1
Duzib168G0199 Durio zibethinus HOM05D002686 ORTHO05D003222 1.6e-06 56.6 116 38.8
FAN23G0852 Fragaria x ananassa HOM05D002686 ORTHO05D003222 1.6e-06 56.6 85 41.2
Lj4g0026142 Lotus japonicus HOM05D002686 ORTHO05D003222 1.6e-06 56.6 157 35.0
Lalb_Chr23g0276281 Lupinus albus HOM05D002686 ORTHO05D003222 1.6e-06 56.6 115 36.5
Os09g0438700 Oryza sativa ssp. japonica HOM05D002686 ORTHO05D003222 1.6e-06 56.6 101 36.6
Sed0027630 Sechium edule HOM05D002686 ORTHO05D003222 1.6e-06 56.6 107 37.4
CiPaw.04G141000 Carya illinoinensis HOM05D002686 ORTHO05D003222 2.1e-06 56.2 113 37.2
CiPaw.04G141200 Carya illinoinensis HOM05D002686 ORTHO05D003222 2.1e-06 56.2 116 35.3
Phvul.009G224900 Phaseolus vulgaris HOM05D002686 ORTHO05D003222 2.1e-06 56.2 101 37.6
VMungo1309G0775 Vigna mungo HOM05D002686 ORTHO05D003222 2.1e-06 56.2 101 37.6
Zm00001eb100100 Zea mays HOM05D002686 ORTHO05D003222 2.1e-06 56.2 101 34.7
Lalb_Chr12g0200301 Lupinus albus HOM05D002686 ORTHO05D003222 3.6e-06 55.5 99 35.4
PRCOL_00004840 Prasinoderma coloniale HOM05D002686 ORTHO05D003222 3.6e-06 55.5 114 33.3
EL10Ac4g08750 Beta vulgaris HOM05D002686 ORTHO05D003222 4.7e-06 55.1 120 38.3
A05p04790 Brassica napus HOM05D005488 ORTHO05D006568 4.7e-06 55.1 112 39.3
CBR_g4057 Chara braunii HOM05D002686 ORTHO05D003222 4.7e-06 55.1 105 37.1
SMO143G0131 Selaginella moellendorffii HOM05D002686 ORTHO05D003222 4.7e-06 55.1 94 37.2
TPR.G28502 Trifolium pratense HOM05D002686 ORTHO05D003222 4.7e-06 55.1 116 37.1
AagrBONN_evm.TU.Sc2ySwM_362.1594 Anthoceros agrestis HOM05D002686 ORTHO05D003222 6.2e-06 54.7 94 39.4
BcaC02g12287 Brassica carinata HOM05D005488 ORTHO05D006568 6.2e-06 54.7 112 39.3
C04p05600 Brassica napus HOM05D005488 ORTHO05D006568 6.2e-06 54.7 112 39.3
BolC4t22190H Brassica oleracea HOM05D005488 ORTHO05D006568 6.2e-06 54.7 112 39.3
AUR62034147 Chenopodium quinoa HOM05D002686 ORTHO05D003222 6.2e-06 54.7 133 36.1
Sabra06G0108500 Salix brachista HOM05D002686 ORTHO05D003222 6.2e-06 54.7 110 37.3
AagrBONN_evm.TU.Sc2ySwM_117.3656 Anthoceros agrestis HOM05D005488 ORTHO05D006568 8.1e-06 54.3 108 38.9
BcaB02g08840 Brassica carinata HOM05D005488 ORTHO05D006568 8.1e-06 54.3 112 39.3
BolC4t28620H Brassica oleracea HOM05D005488 ORTHO05D006568 8.1e-06 54.3 112 39.3
BraA05t19455Z Brassica rapa HOM05D005488 ORTHO05D006568 8.1e-06 54.3 112 39.3
MD02G1096600 Malus domestica HOM05D002686 ORTHO05D003222 8.1e-06 54.3 116 37.1
MD15G1221300 Malus domestica HOM05D002686 ORTHO05D003222 8.1e-06 54.3 116 37.1


User provided reference genes

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