Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre16.g670900 Chlamydomonas reinhardtii HOM05D005677 ORTHO05D006966 5.0e-195 684.5 405 100.0
Cre17.g747147 Chlamydomonas reinhardtii HOM05D001602 ORTHO05D001470 4.8e-12 76.6 96 49.0
Glyma.02G057000 Glycine max HOM05D005677 ORTHO05D006966 2.2e-09 67.8 103 44.7
MCO11G671 Micromonas commoda HOM05D005677 ORTHO05D006966 3.8e-09 67.0 97 44.3
SMO364G0506 Selaginella moellendorffii HOM05D005677 ORTHO05D006966 8.4e-09 65.9 99 47.5
TAR625G0490 Trochodendron aralioides HOM05D005677 ORTHO05D006966 1.4e-08 65.1 100 43.0
MBI03_g28536_MAGBIO Magnolia biondii HOM05D005677 ORTHO05D006966 2.4e-08 64.3 107 40.2
ATR0772G168 Amborella trichopoda HOM05D005677 ORTHO05D006966 5.4e-08 63.2 93 41.9
Lj2P453T29 Lonicera japonica HOM05D005677 ORTHO05D006966 7.1e-08 62.8 99 44.4
MCO11G773 Micromonas commoda HOM05D001602 ORTHO05D006966 1.2e-07 62.0 100 42.0
Phvul.003G253400 Phaseolus vulgaris HOM05D005677 ORTHO05D006966 1.2e-07 62.0 98 42.9
VMungo0251G0356 Vigna mungo HOM05D005677 ORTHO05D006966 1.6e-07 61.6 98 45.9
Medtr8g077610 Medicago truncatula HOM05D005677 ORTHO05D006966 2.1e-07 61.2 104 42.3
Actinidia19186 Actinidia chinensis HOM05D005677 ORTHO05D006966 7.9e-07 59.3 110 38.2
Cfa012366 Carpinus fangiana HOM05D001602 ORTHO05D001470 1.3e-06 58.5 88 42.0
Migut.H00989 Erythranthe guttata HOM05D005677 ORTHO05D006966 1.3e-06 58.5 106 41.5
Hma1.2p1_0414F.1_g147600 Hydrangea macrophylla HOM05D001602 ORTHO05D001470 1.3e-06 58.5 87 40.2
SEGI_27117 Sequoiadendron giganteum HOM05D001602 ORTHO05D001470 1.3e-06 58.5 97 42.3
TWI81G0159 Tripterygium wilfordii HOM05D001602 ORTHO05D001470 1.3e-06 58.5 94 39.4
CSS0028163 Camellia sinensis var. sinensis HOM05D005677 ORTHO05D006966 1.8e-06 58.2 109 39.4
AUR62007566 Chenopodium quinoa HOM05D005677 ORTHO05D006966 1.8e-06 58.2 105 40.0
Zm00001eb432040 Zea mays HOM05D001602 ORTHO05D001470 1.8e-06 58.2 95 47.4
Haze_08317 Corylus avellana HOM05D001602 ORTHO05D001470 2.3e-06 57.8 88 40.9
Gohir.D03G014700 Gossypium hirsutum HOM05D005677 ORTHO05D006966 2.3e-06 57.8 101 40.6
Gorai.003G015000 Gossypium raimondii HOM05D005677 ORTHO05D006966 2.3e-06 57.8 101 40.6
PGR042G0660 Punica granatum HOM05D001602 ORTHO05D001470 2.3e-06 57.8 89 41.6
SalBow5G4467 Salvia bowleyana HOM05D005677 ORTHO05D006966 2.3e-06 57.8 103 42.7
Ca_22266_v3 Cicer arietinum L. HOM05D005677 ORTHO05D006966 3.0e-06 57.4 109 39.4
Ca_22280_v3 Cicer arietinum L. HOM05D005677 ORTHO05D006966 3.0e-06 57.4 109 39.4
Nn2g12315 Nelumbo nucifera HOM05D005677 ORTHO05D006966 3.9e-06 57.0 112 38.4
HPP92_019510 Vanilla planifolia HOM05D005677 ORTHO05D006966 3.9e-06 57.0 96 42.7
Mapoly0059s0066 Marchantia polymorpha HOM05D001602 ORTHO05D001470 5.1e-06 56.6 91 42.9
Psat4g079800 Pisum sativum HOM05D005677 ORTHO05D006966 5.1e-06 56.6 103 41.7
PGR102G2535 Punica granatum HOM05D005677 ORTHO05D006966 5.1e-06 56.6 100 41.0
EL10Ac6g15562 Beta vulgaris HOM05D005677 ORTHO05D006966 6.7e-06 56.2 102 39.2
Migut.L00520 Erythranthe guttata HOM05D005677 ORTHO05D006966 6.7e-06 56.2 114 39.5
Os07g0569500 Oryza sativa ssp. japonica HOM05D005677 ORTHO05D006966 6.7e-06 56.2 105 39.0
Psat4g092640 Pisum sativum HOM05D005677 ORTHO05D006966 6.7e-06 56.2 101 41.6
QL06p046093 Quercus lobata HOM05D005677 ORTHO05D006966 6.7e-06 56.2 102 40.2
Rhsim07G0121000 Rhododendron simsii HOM05D001602 ORTHO05D001470 6.7e-06 56.2 88 39.8
RcHm_v2.0_Chr7g0207961 Rosa chinensis HOM05D001602 ORTHO05D001470 6.7e-06 56.2 95 35.8
SEGI_27625 Sequoiadendron giganteum HOM05D001602 ORTHO05D001470 6.7e-06 56.2 87 42.5
FAN23G0294 Fragaria x ananassa HOM05D005677 ORTHO05D006966 8.7e-06 55.8 104 41.3
Gohir.A02G165300 Gossypium hirsutum HOM05D005677 ORTHO05D006966 8.7e-06 55.8 101 39.6


User provided reference genes

Program Settings