Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre16.g667100 Chlamydomonas reinhardtii HOM05D006420 ORTHO05D008009 1.1e-154 550.1 296 100.0
RcHm_v2.0_Chr3g0454981 Rosa chinensis HOM05D006420 ORTHO05D008009 2.9e-27 126.7 246 33.7
FAN05G3282 Fragaria x ananassa HOM05D006420 ORTHO05D008009 3.8e-27 126.3 232 35.3
MD04G1204800 Malus domestica HOM05D006420 ORTHO05D008009 3.8e-27 126.3 230 33.0
FAN09G3808 Fragaria x ananassa HOM05D006420 ORTHO05D008009 8.5e-27 125.2 235 34.0
A03p68650 Brassica napus HOM05D006420 ORTHO05D008009 1.1e-26 124.8 232 33.2
BraSC39t46193Z Brassica rapa HOM05D006420 ORTHO05D008009 1.1e-26 124.8 232 33.2
FvH4_6g06020 Fragaria vesca HOM05D006420 ORTHO05D008009 1.1e-26 124.8 232 34.1
FAN14G2531 Fragaria x ananassa HOM05D006420 ORTHO05D008009 1.1e-26 124.8 232 34.1
AL1G65580 Arabidopsis lyrata HOM05D006420 ORTHO05D008009 1.5e-26 124.4 232 34.9
Zm00001eb054020 Zea mays HOM05D006420 ORTHO05D008009 1.9e-26 124.0 233 30.5
BcaC06g31763 Brassica carinata HOM05D006420 ORTHO05D008009 4.2e-26 122.9 236 34.3
AT1G55000 Arabidopsis thaliana HOM05D006420 ORTHO05D008009 5.5e-26 122.5 232 33.6
FAN02G2504 Fragaria x ananassa HOM05D006420 ORTHO05D008009 5.5e-26 122.5 232 33.2
MD12G1218500 Malus domestica HOM05D006420 ORTHO05D008009 1.2e-25 121.3 262 32.1
Carub.0002s0818 Capsella rubella HOM05D006420 ORTHO05D008009 1.6e-25 120.9 236 34.7
BcaC02g10755 Brassica carinata HOM05D006420 ORTHO05D008009 2.1e-25 120.6 236 33.9
C04p25420 Brassica napus HOM05D006420 ORTHO05D008009 2.1e-25 120.6 236 33.9
BolC4t24060H Brassica oleracea HOM05D006420 ORTHO05D008009 2.1e-25 120.6 236 33.9
CARHR287540 Cardamine hirsuta HOM05D006420 ORTHO05D008009 2.1e-25 120.6 236 34.3
Thhalv10023646m.g Eutrema salsugineum HOM05D006420 ORTHO05D008009 2.1e-25 120.6 232 34.5
Lalb_Chr21g0310681 Lupinus albus HOM05D006420 ORTHO05D008009 2.1e-25 120.6 231 31.6
Os03g0699600 Oryza sativa ssp. japonica HOM05D006420 ORTHO05D008009 2.1e-25 120.6 233 30.5
SpUn0004_0090 Schrenkiella parvula HOM05D006420 ORTHO05D008009 4.7e-25 119.4 236 34.3
FAN05G1000 Fragaria x ananassa HOM05D006420 ORTHO05D008009 6.1e-25 119.0 250 33.2
Cpa.g.sc48.61 Carica papaya HOM05D006420 ORTHO05D008009 1.8e-24 117.5 232 30.6
DCAR_029409 Daucus carota HOM05D006420 ORTHO05D008009 1.8e-24 117.5 233 32.2
RhsimUnG0226900 Rhododendron simsii HOM05D006420 ORTHO05D008009 1.8e-24 117.5 258 31.0
CAN.G1034.41 Capsicum annuum HOM05D006420 ORTHO05D008009 2.3e-24 117.1 234 31.2
Sc06g0003280 Simmondsia chinensis HOM05D006420 ORTHO05D008009 3.0e-24 116.7 231 30.3
Prupe.6G324800 Prunus persica HOM05D006420 ORTHO05D008009 5.2e-24 115.9 232 31.9
Hund21694 Selenicereus undatus HOM05D006420 ORTHO05D008009 5.2e-24 115.9 232 31.9
Aa31LG2G11700 Aethionema arabicum HOM05D006774 ORTHO05D008411 6.8e-24 115.5 232 33.2
MSTRG.5100 Avicennia marina HOM05D006420 ORTHO05D008009 6.8e-24 115.5 229 31.0
CiPaw.07G020700 Carya illinoinensis HOM05D006420 ORTHO05D008009 6.8e-24 115.5 231 29.4
Phvul.007G179700 Phaseolus vulgaris HOM05D006420 ORTHO05D008009 6.8e-24 115.5 231 30.7
Migut.N01987 Erythranthe guttata HOM05D006420 ORTHO05D008009 8.8e-24 115.2 229 33.2
Migut.N02012 Erythranthe guttata HOM05D006420 ORTHO05D008009 8.8e-24 115.2 229 33.2
Nitab4.5_0000137g0140 Nicotiana tabacum HOM05D006420 ORTHO05D008009 8.8e-24 115.2 231 29.9
Nn1g02269 Nelumbo nucifera HOM05D006420 ORTHO05D008009 1.5e-23 114.4 234 30.8
CsaV3_2G005340 Cucumis sativus L. HOM05D006420 ORTHO05D008009 2.0e-23 114.0 257 30.7
Cfa006594 Carpinus fangiana HOM05D006420 ORTHO05D008009 2.6e-23 113.6 232 31.5
Glyma.10G154000 Glycine max HOM05D006420 ORTHO05D008009 2.6e-23 113.6 231 31.2
Peaxi162Scf00037g00513 Petunia axillaris HOM05D006420 ORTHO05D008009 2.6e-23 113.6 234 29.5
vmacro05011 Vaccinium macrocarpon HOM05D006420 ORTHO05D008009 2.6e-23 113.6 234 30.3
Solyc01g099130.3 Solanum lycopersicum HOM05D006420 ORTHO05D008009 3.4e-23 113.2 237 32.1
Sopen01g042690 Solanum pennellii HOM05D006420 ORTHO05D008009 3.4e-23 113.2 237 32.1
THA.LOC104820863 Tarenaya hassleriana HOM05D006420 ORTHO05D008009 3.4e-23 113.2 234 32.5
Actinidia05697 Actinidia chinensis HOM05D006420 ORTHO05D008009 4.4e-23 112.8 228 32.0
ClCG02G015760 Citrullus lanatus HOM05D006420 ORTHO05D008009 4.4e-23 112.8 263 29.3
PGR083G0891 Punica granatum HOM05D006420 ORTHO05D008009 5.7e-23 112.5 232 28.9
Sabra13G0024000 Salix brachista HOM05D006420 ORTHO05D008009 5.7e-23 112.5 229 31.4
Medtr1g082950 Medicago truncatula HOM05D006420 ORTHO05D008009 7.5e-23 112.1 228 30.7
Psat6g150480 Pisum sativum HOM05D006420 ORTHO05D008009 7.5e-23 112.1 228 30.7
Potri.013G021600 Populus trichocarpa HOM05D006420 ORTHO05D008009 7.5e-23 112.1 235 31.5
SMO356G0643 Selaginella moellendorffii HOM05D006420 ORTHO05D008009 7.5e-23 112.1 228 31.6
PGSC0003DMG400024687 Solanum tuberosum HOM05D006420 ORTHO05D008009 7.5e-23 112.1 237 31.2
HPP92_020377 Vanilla planifolia HOM05D006420 ORTHO05D008009 7.5e-23 112.1 233 29.2
Duzib177G0348 Durio zibethinus HOM05D006420 ORTHO05D008009 9.8e-23 111.7 229 29.7
Lj5g0015213 Lotus japonicus HOM05D006420 ORTHO05D008009 9.8e-23 111.7 228 31.1
Nn4g26277 Nelumbo nucifera HOM05D006420 ORTHO05D008009 9.8e-23 111.7 234 30.8
Pp3c16_5370 Physcomitrium patens HOM05D006420 ORTHO05D008009 9.8e-23 111.7 229 31.4
Thecc.05G302400 Theobroma cacao HOM05D006420 ORTHO05D008009 1.3e-22 111.3 229 29.3
CANSAT54G1557 Cannabis sativa HOM05D006420 ORTHO05D008009 2.2e-22 110.5 231 29.4
Aqoxy5G00493 Aquilegia oxysepala HOM05D006420 ORTHO05D008009 2.8e-22 110.2 230 29.6
EL10Ac4g09358 Beta vulgaris HOM05D006420 ORTHO05D008009 2.8e-22 110.2 229 31.0
Gohir.D08G227700 Gossypium hirsutum HOM05D006420 ORTHO05D008009 2.8e-22 110.2 229 29.3
Gorai.004G241900 Gossypium raimondii HOM05D006420 ORTHO05D008009 2.8e-22 110.2 229 29.3
Manes.08G120400 Manihot esculenta HOM05D006420 ORTHO05D008009 2.8e-22 110.2 232 28.9
Oeu010909.1 Olea europaea HOM05D006420 ORTHO05D008009 2.8e-22 110.2 229 29.7
Sed0005627 Sechium edule HOM05D006420 ORTHO05D008009 2.8e-22 110.2 228 29.8
VMungo0720G1765 Vigna mungo HOM05D006420 ORTHO05D008009 2.8e-22 110.2 231 30.7
Atru.chr2.393 Acer truncatum HOM05D006420 ORTHO05D008009 3.7e-22 109.8 229 30.1
Ah.04g160290 Amaranthus hybridus HOM05D006420 ORTHO05D008009 3.7e-22 109.8 229 31.4
AUR62000819 Chenopodium quinoa HOM05D006420 ORTHO05D008009 3.7e-22 109.8 229 30.1
GSVIVG01000081001 Vitis vinifera HOM05D006420 ORTHO05D008009 3.7e-22 109.8 220 31.4
COL.COLO4_13456 Corchorus olitorius HOM05D006420 ORTHO05D008009 4.8e-22 109.4 232 29.3
Gohir.A08G210900 Gossypium hirsutum HOM05D006420 ORTHO05D008009 4.8e-22 109.4 229 28.8
QL03p007116 Quercus lobata HOM05D006420 ORTHO05D008009 4.8e-22 109.4 220 32.3
TAR365G0270 Trochodendron aralioides HOM05D006420 ORTHO05D008009 4.8e-22 109.4 232 30.6
TWI56G0424 Tripterygium wilfordii HOM05D006420 ORTHO05D008009 6.3e-22 109.0 233 29.2
ATR0332G062 Amborella trichopoda HOM05D006420 ORTHO05D008009 8.3e-22 108.6 237 28.7
CSS0034260 Camellia sinensis var. sinensis HOM05D006420 ORTHO05D008009 8.3e-22 108.6 231 29.4
Ciclev10002177m.g Citrus clementina HOM05D006420 ORTHO05D008009 8.3e-22 108.6 231 31.6
TPR.G6113 Trifolium pratense HOM05D006420 ORTHO05D008009 8.3e-22 108.6 228 30.3
CSS0037657 Camellia sinensis var. sinensis HOM05D006420 ORTHO05D008009 1.1e-21 108.2 231 29.4
Ca_10114_v3 Cicer arietinum L. HOM05D006420 ORTHO05D008009 1.1e-21 108.2 228 29.8
Glyma.20G234300 Glycine max HOM05D006420 ORTHO05D008009 1.4e-21 107.8 264 29.5
Lsat_1_v5_gn_9_123421 Lactuca sativa HOM05D006420 ORTHO05D008009 1.8e-21 107.5 222 31.1
TAR636G1821 Trochodendron aralioides HOM05D006420 ORTHO05D008009 1.8e-21 107.5 233 29.6
PSO210G7816 Papaver somniferum HOM05D006420 ORTHO05D008009 3.1e-21 106.7 233 28.8
Cfa006595 Carpinus fangiana HOM05D006420 ORTHO05D008009 4.1e-21 106.3 229 29.7
HanXRQChr16g0524621 Helianthus annuus HOM05D006420 ORTHO05D008009 9.1e-21 105.1 233 30.5
Duzib106G1877 Durio zibethinus HOM05D006420 ORTHO05D008009 1.6e-20 104.4 231 28.1
AagrBONN_evm.TU.Sc2ySwM_368.542 Anthoceros agrestis HOM05D006420 ORTHO05D008009 2.7e-20 103.6 251 31.9
Dinv23938 Davidia involucrata HOM05D006420 ORTHO05D008009 3.5e-20 103.2 217 30.0
arahy.Tifrunner.gnm1.ann1.GHU2GX Arachis hypogaea HOM05D006420 ORTHO05D008009 1.0e-19 101.7 229 29.7
arahy.Tifrunner.gnm1.ann1.7ESY4D Arachis hypogaea HOM05D006420 ORTHO05D008009 1.7e-19 100.9 229 29.3
AUR62005152 Chenopodium quinoa HOM05D006420 ORTHO05D008009 2.9e-19 100.1 239 28.9
Hma1.2p1_0928F.1_g237740 Hydrangea macrophylla HOM05D006420 ORTHO05D008009 5.0e-19 99.4 267 28.5
Cc02_g33350 Coffea canephora HOM05D006420 ORTHO05D008009 8.6e-19 98.6 229 27.5
MBI04_g29616_MAGBIO Magnolia biondii HOM05D006420 ORTHO05D008009 1.1e-18 98.2 209 31.6
MELO3C004253.2 Cucumis melo HOM05D000208 ORTHO05D000130 1.5e-18 97.8 178 36.0
ECA232G4325 Erigeron canadensis HOM05D006420 ORTHO05D008009 9.5e-18 95.1 231 30.3
Lj9A85G78 Lonicera japonica HOM05D006420 ORTHO05D008009 9.5e-18 95.1 217 28.1
Lj9A86G16 Lonicera japonica HOM05D006420 ORTHO05D008009 9.5e-18 95.1 217 28.1
Potri.005G032100 Populus trichocarpa HOM05D006420 ORTHO05D008009 5.2e-16 89.4 139 36.7
CDE02G2742 Ceratophyllum demersum HOM05D006420 ORTHO05D008009 1.7e-14 84.3 104 38.5
MD10G1167700 Malus domestica HOM05D006420 ORTHO05D008009 1.2e-12 78.2 105 35.2
Nitab4.5_0005541g0070 Nicotiana tabacum HOM05D006420 ORTHO05D008009 3.8e-11 73.2 231 24.2
Haze_04190 Corylus avellana HOM05D006420 ORTHO05D008009 1.9e-10 70.9 331 21.8
SGA_v2.0_scaffold81G26063 Striga asiatica HOM05D006420 ORTHO05D000105 1.4e-08 64.7 88 33.0
Eucgr.B01949 Eucalyptus grandis HOM05D006420 ORTHO05D008009 2.3e-08 63.9 90 36.7
Eucgr.B01946 Eucalyptus grandis HOM05D006420 ORTHO05D008009 5.2e-08 62.8 88 36.4
vmacro23281 Vaccinium macrocarpon HOM05D006420 ORTHO05D008009 2.6e-07 60.5 89 34.8
Eucgr.B01859 Eucalyptus grandis HOM05D006420 ORTHO05D008009 3.4e-07 60.1 88 35.2
Rhsim07G0185100 Rhododendron simsii HOM05D006420 ORTHO05D008009 2.9e-06 57.0 148 29.1
TWI74G1308 Tripterygium wilfordii HOM05D002624 ORTHO05D002796 2.9e-06 57.0 93 31.2


User provided reference genes

Program Settings