Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre16.g656400 Chlamydomonas reinhardtii HOM05D006192 ORTHO05D008003 4.8e-253 877.5 480 100.0
Migut.A00129 Erythranthe guttata HOM05D006192 ORTHO05D008003 3.7e-181 638.6 401 74.8
Eucgr.C00658 Eucalyptus grandis HOM05D006192 ORTHO05D008003 1.4e-180 636.7 408 74.0
HanXRQChr06g0173891 Helianthus annuus HOM05D006192 ORTHO05D008003 1.8e-180 636.3 410 73.2
Ciclev10008149m.g Citrus clementina HOM05D006192 ORTHO05D008003 5.4e-180 634.8 392 75.5
PGR031G3391 Punica granatum HOM05D006192 ORTHO05D008003 7.0e-180 634.4 406 73.9
COL.COLO4_21071 Corchorus olitorius HOM05D006192 ORTHO05D008003 1.6e-179 633.3 402 74.4
CsaV3_4G035660 Cucumis sativus L. HOM05D006192 ORTHO05D008003 2.7e-179 632.5 406 73.4
TWI34G1683 Tripterygium wilfordii HOM05D006192 ORTHO05D008003 2.7e-179 632.5 392 75.0
MELO3C016873.2 Cucumis melo HOM05D006192 ORTHO05D008003 4.5e-179 631.7 392 74.7
SalBow4G2073 Salvia bowleyana HOM05D006192 ORTHO05D008003 4.5e-179 631.7 401 73.6
Lj7A269G19 Lonicera japonica HOM05D006192 ORTHO05D008003 5.9e-179 631.3 392 74.0
PGSC0003DMG400019063 Solanum tuberosum HOM05D006192 ORTHO05D008003 5.9e-179 631.3 401 73.3
THA.LOC104818573 Tarenaya hassleriana HOM05D006192 ORTHO05D008003 5.9e-179 631.3 400 73.8
ClCG05G017890 Citrullus lanatus HOM05D006192 ORTHO05D008003 7.8e-179 630.9 392 74.5
Lsat_1_v5_gn_3_23900 Lactuca sativa HOM05D006192 ORTHO05D008003 7.8e-179 630.9 393 74.3
SalBow5G1678 Salvia bowleyana HOM05D006192 ORTHO05D008003 7.8e-179 630.9 401 73.8
Solyc08g063080.3 Solanum lycopersicum HOM05D006192 ORTHO05D008003 7.8e-179 630.9 401 73.3
PSO384G1492 Papaver somniferum HOM05D006192 ORTHO05D008003 1.3e-178 630.2 392 75.0
Peaxi162Scf00327g00612 Petunia axillaris HOM05D006192 ORTHO05D008003 1.3e-178 630.2 401 72.8
Sopen08g018650 Solanum pennellii HOM05D006192 ORTHO05D008003 1.3e-178 630.2 401 73.1
Dinv27994 Davidia involucrata HOM05D006192 ORTHO05D008003 1.7e-178 629.8 392 74.7
Nitab4.5_0002829g0050 Nicotiana tabacum HOM05D006192 ORTHO05D008003 1.7e-178 629.8 401 73.6
Prupe.1G411000 Prunus persica HOM05D006192 ORTHO05D008003 1.7e-178 629.8 401 73.3
DCAR_000802 Daucus carota HOM05D006192 ORTHO05D008003 2.3e-178 629.4 392 74.2
Manes.03G048700 Manihot esculenta HOM05D006192 ORTHO05D008003 2.3e-178 629.4 392 74.7
Oeu003988.1 Olea europaea HOM05D006192 ORTHO05D008003 2.3e-178 629.4 402 73.6
Potri.006G228000 Populus trichocarpa HOM05D006192 ORTHO05D008003 3.9e-178 628.6 392 74.7
CSS0041370 Camellia sinensis var. sinensis HOM05D006192 ORTHO05D008003 5.0e-178 628.2 404 72.8
MD15G1058400 Malus domestica HOM05D006192 ORTHO05D008003 5.0e-178 628.2 401 73.8
ECA246G2418 Erigeron canadensis HOM05D006192 ORTHO05D008003 6.6e-178 627.9 393 74.3
Actinidia30319 Actinidia chinensis HOM05D006192 ORTHO05D008003 1.1e-177 627.1 392 74.7
arahy.Tifrunner.gnm1.ann1.S5W95P Arachis hypogaea HOM05D006192 ORTHO05D008003 1.1e-177 627.1 392 75.0
CANSAT25G1130 Cannabis sativa HOM05D006192 ORTHO05D008003 1.5e-177 626.7 406 72.7
Cfa017964 Carpinus fangiana HOM05D006192 ORTHO05D008003 1.5e-177 626.7 392 74.7
Haze_18173 Corylus avellana HOM05D006192 ORTHO05D008003 1.9e-177 626.3 392 74.5
FAN20G2998 Fragaria x ananassa HOM05D006192 ORTHO05D008003 2.5e-177 625.9 401 72.8
FAN27G0797 Fragaria x ananassa HOM05D006192 ORTHO05D008003 2.5e-177 625.9 401 72.8
Nitab4.5_0005436g0010 Nicotiana tabacum HOM05D006192 ORTHO05D008003 2.5e-177 625.9 401 72.8
FAN24G0058 Fragaria x ananassa HOM05D006192 ORTHO05D008003 3.3e-177 625.5 401 72.8
PSO339G5117 Papaver somniferum HOM05D006192 ORTHO05D008003 3.3e-177 625.5 392 74.5
Thecc.09G055000 Theobroma cacao HOM05D006192 ORTHO05D008003 3.3e-177 625.5 392 75.0
Nn7g37295 Nelumbo nucifera HOM05D006192 ORTHO05D008003 4.3e-177 625.2 390 74.4
Rhsim07G0125300 Rhododendron simsii HOM05D006192 ORTHO05D008003 4.3e-177 625.2 406 72.2
Cc08_g10700 Coffea canephora HOM05D006192 ORTHO05D008003 5.6e-177 624.8 394 73.4
FvH4_2g31750 Fragaria vesca HOM05D006192 ORTHO05D008003 5.6e-177 624.8 401 72.6
Oeu009349.1 Olea europaea HOM05D006192 ORTHO05D008003 5.6e-177 624.8 401 73.6
Os05g0387200 Oryza sativa ssp. japonica HOM05D006192 ORTHO05D008003 5.6e-177 624.8 396 73.5
TPR.G32742 Trifolium pratense HOM05D006192 ORTHO05D008003 5.6e-177 624.8 392 74.5
arahy.Tifrunner.gnm1.ann1.44XN4P Arachis hypogaea HOM05D006192 ORTHO05D008003 7.3e-177 624.4 392 75.0
Dinv22891 Davidia involucrata HOM05D006192 ORTHO05D008003 9.5e-177 624.0 392 74.2
Thhalv10025085m.g Eutrema salsugineum HOM05D006192 ORTHO05D008003 9.5e-177 624.0 399 72.9
FAN15G2167 Fragaria x ananassa HOM05D006192 ORTHO05D008003 9.5e-177 624.0 401 72.8
Sp7g30790 Schrenkiella parvula HOM05D006192 ORTHO05D008003 9.5e-177 624.0 398 73.1
Lalb_Chr20g0110241 Lupinus albus HOM05D006192 ORTHO05D008003 1.2e-176 623.6 390 74.4
Ah.11g044810 Amaranthus hybridus HOM05D006192 ORTHO05D008003 1.6e-176 623.2 405 72.6
AT4G33030 Arabidopsis thaliana HOM05D006192 ORTHO05D008003 2.1e-176 622.9 397 72.5
C01p05650 Brassica napus HOM05D006192 ORTHO05D008003 2.1e-176 622.9 399 72.9
BolC1t00544H Brassica oleracea HOM05D006192 ORTHO05D008003 2.1e-176 622.9 399 72.9
Carub.0007s0745 Capsella rubella HOM05D006192 ORTHO05D008003 2.1e-176 622.9 400 72.5
Ca_08416_v3 Cicer arietinum L. HOM05D006192 ORTHO05D008003 2.1e-176 622.9 390 74.4
Sed0014899 Sechium edule HOM05D006192 ORTHO05D008003 2.1e-176 622.9 406 71.7
MSTRG.25952 Avicennia marina HOM05D006192 ORTHO05D008003 2.8e-176 622.5 406 71.9
EL10Ac2g03859 Beta vulgaris HOM05D006192 ORTHO05D008003 2.8e-176 622.5 392 74.7
BraA01t00499Z Brassica rapa HOM05D006192 ORTHO05D008003 2.8e-176 622.5 393 73.5
RcHm_v2.0_Chr6g0311071 Rosa chinensis HOM05D006192 ORTHO05D008003 2.8e-176 622.5 401 72.8
AL7G18640 Arabidopsis lyrata HOM05D006192 ORTHO05D008003 3.6e-176 622.1 392 73.2
CAN.G9.23 Capsicum annuum HOM05D006192 ORTHO05D008003 3.6e-176 622.1 401 72.6
Glyma.03G131100 Glycine max HOM05D006192 ORTHO05D008003 3.6e-176 622.1 390 74.4
Gohir.A05G041700 Gossypium hirsutum HOM05D006192 ORTHO05D008003 3.6e-176 622.1 392 73.7
CARHR241040 Cardamine hirsuta HOM05D006192 ORTHO05D008003 4.7e-176 621.7 398 72.6
SGA_v2.0_scaffold20G09220 Striga asiatica HOM05D006192 ORTHO05D008003 4.7e-176 621.7 392 73.0
BcaC09g52100 Brassica carinata HOM05D006192 ORTHO05D008003 6.1e-176 621.3 392 73.5
AUR62009135 Chenopodium quinoa HOM05D006192 ORTHO05D008003 6.1e-176 621.3 404 71.8
Medtr7g090510 Medicago truncatula HOM05D006192 ORTHO05D008003 6.1e-176 621.3 390 74.4
VMungo1383G3565 Vigna mungo HOM05D006192 ORTHO05D008003 6.1e-176 621.3 392 74.0
A01p05160 Brassica napus HOM05D006192 ORTHO05D008003 8.0e-176 620.9 392 73.5
Glyma.19G133100 Glycine max HOM05D006192 ORTHO05D008003 8.0e-176 620.9 392 74.2
Gorai.009G044500 Gossypium raimondii HOM05D006192 ORTHO05D008003 8.0e-176 620.9 392 73.5
Sc01g0008030 Simmondsia chinensis HOM05D006192 ORTHO05D008003 8.0e-176 620.9 406 70.9
QL02p001073 Quercus lobata HOM05D006192 ORTHO05D008003 1.0e-175 620.5 392 74.2
AUR62039119 Chenopodium quinoa HOM05D006192 ORTHO05D008003 1.4e-175 620.2 404 72.0
AUR62043945 Chenopodium quinoa HOM05D006192 ORTHO05D008003 1.4e-175 620.2 404 72.0
Duzib187G0943 Durio zibethinus HOM05D006192 ORTHO05D008003 1.4e-175 620.2 392 73.7
Gohir.D05G043400 Gossypium hirsutum HOM05D006192 ORTHO05D008003 1.8e-175 619.8 392 73.0
Zm00001eb347070 Zea mays HOM05D006192 ORTHO05D008003 3.1e-175 619.0 396 73.2
BolC7t46390H Brassica oleracea HOM05D006192 ORTHO05D008003 4.0e-175 618.6 390 73.6
Phvul.001G127100 Phaseolus vulgaris HOM05D006192 ORTHO05D008003 4.0e-175 618.6 392 73.5
A03p61760 Brassica napus HOM05D006192 ORTHO05D008003 5.2e-175 618.2 390 73.6
BraA03t15213Z Brassica rapa HOM05D006192 ORTHO05D008003 6.8e-175 617.8 390 73.3
C07p59470 Brassica napus HOM05D006192 ORTHO05D008003 8.9e-175 617.5 390 73.1
CiPaw.15G038100 Carya illinoinensis HOM05D006192 ORTHO05D008003 8.9e-175 617.5 392 73.2
MBI16_g06012_MAGBIO Magnolia biondii HOM05D006192 ORTHO05D008003 8.9e-175 617.5 392 73.5
Hund19447 Selenicereus undatus HOM05D006192 ORTHO05D008003 1.2e-174 617.1 405 72.6
Psat3g076360 Pisum sativum HOM05D006192 ORTHO05D008003 1.5e-174 616.7 390 73.6
Aa31LG4G11110 Aethionema arabicum HOM05D006192 ORTHO05D008003 1.7e-173 613.2 386 73.6
Pp3c10_9630 Physcomitrium patens HOM05D006192 ORTHO05D008003 1.7e-173 613.2 402 70.9
Lj1g0026013 Lotus japonicus HOM05D006192 ORTHO05D008003 2.2e-173 612.8 392 73.2
Sabra06G0176500 Salix brachista HOM05D006192 ORTHO05D008003 9.2e-172 607.4 423 68.6
Mapoly0010s0049 Marchantia polymorpha HOM05D006192 ORTHO05D008003 1.2e-171 607.1 390 72.1
CBR_g23789 Chara braunii HOM05D006192 ORTHO05D008003 3.0e-170 602.4 403 68.5
ATR0307G063 Amborella trichopoda HOM05D006192 ORTHO05D008003 3.9e-170 602.1 387 72.6
AagrBONN_evm.TU.Sc2ySwM_368.1072 Anthoceros agrestis HOM05D006192 ORTHO05D008003 1.5e-169 600.1 389 71.2
SMO239G0161 Selaginella moellendorffii HOM05D006192 ORTHO05D008003 9.5e-169 597.4 397 69.5
MCO15G376 Micromonas commoda HOM05D006192 ORTHO05D008003 1.6e-168 596.7 394 69.5
HPP92_006663 Vanilla planifolia HOM05D006192 ORTHO05D008003 1.2e-163 580.5 365 74.0
BcaNung02151 Brassica carinata HOM05D006192 ORTHO05D008003 1.8e-159 566.6 390 68.7
PRCOL_00003517 Prasinoderma coloniale HOM05D006192 ORTHO05D008003 3.1e-159 565.8 386 67.6
GSVIVG01035394001 Vitis vinifera HOM05D006192 ORTHO05D008003 2.9e-157 559.3 401 67.3
TAR369G0638 Trochodendron aralioides HOM05D006192 ORTHO05D008003 7.1e-140 501.5 293 78.2
unitig_748.g7527 Utricularia gibba HOM05D006192 ORTHO05D008003 7.1e-140 501.5 392 63.3
SalBow5G5187 Salvia bowleyana HOM05D006192 ORTHO05D008003 3.5e-139 499.2 349 69.1
Lj7A268T22 Lonicera japonica HOM05D006192 ORTHO05D008003 3.7e-128 462.6 288 74.3
Atru.chr7.1090 Acer truncatum HOM05D006192 ORTHO05D008003 4.0e-127 459.1 288 74.0
SEGI_22284 Sequoiadendron giganteum HOM05D006192 ORTHO05D008003 1.0e-122 444.5 265 75.1
CDE02G3162 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 1.9e-116 423.7 251 77.7
SalBow8G2204 Salvia bowleyana HOM05D006192 ORTHO05D008003 1.1e-87 328.2 237 65.4
CDE04G0209 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 1.8e-87 327.4 188 78.7
CDE04G3367 Ceratophyllum demersum HOM05D006192 ORTHO05D008003 8.3e-64 248.8 167 69.5
MD08G1063500 Malus domestica HOM05D006192 ORTHO05D008003 6.8e-50 202.6 129 72.1
SalBow8G3463 Salvia bowleyana HOM05D006192 ORTHO05D008003 6.8e-50 202.6 195 52.8
SalBow8G1594 Salvia bowleyana HOM05D006192 ORTHO05D008003 3.9e-45 186.8 128 67.2
SEGI_03729 Sequoiadendron giganteum HOM05D006192 ORTHO05D008003 5.6e-44 183.0 136 64.0
SalBow5G3520 Salvia bowleyana HOM05D000200 ORTHO05D000262 4.3e-36 156.8 138 58.0
SalBow4G3004 Salvia bowleyana HOM05D006192 ORTHO05D001699 1.7e-24 118.2 94 61.7
Atru.chr7.1089 Acer truncatum HOM05D006192 ORTHO05D008003 2.7e-22 110.9 67 73.1
SalBow8G4783 Salvia bowleyana HOM05D006192 ORTHO05D358531 6.0e-22 109.8 101 54.5
Mapoly0068s0034 Marchantia polymorpha HOM05D000776 ORTHO05D001624 1.3e-11 75.5 334 28.4
BcaC01g05298 Brassica carinata HOM05D006192 ORTHO05D091607 2.8e-11 74.3 63 55.6
Ciclev10001690m.g Citrus clementina HOM05D000776 ORTHO05D001624 2.2e-08 64.7 324 25.3
Zm00001eb042670 Zea mays HOM05D000776 ORTHO05D001624 2.2e-08 64.7 288 25.7
HPP92_013398 Vanilla planifolia HOM05D000776 ORTHO05D001624 1.4e-07 62.0 125 31.2
Sabra03G0087300 Salix brachista HOM05D000776 ORTHO05D001624 1.6e-06 58.5 173 26.0
Potri.003G123700 Populus trichocarpa HOM05D000776 ORTHO05D001624 2.7e-06 57.8 174 26.4
Migut.E01129 Erythranthe guttata HOM05D000776 ORTHO05D001624 7.9e-06 56.2 129 27.1


User provided reference genes

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