Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre15.g642050 Chlamydomonas reinhardtii HOM05D005746 ORTHO05D007105 0.0e+00 1505.7 1529 100.0
AagrBONN_evm.TU.Sc2ySwM_369.379 Anthoceros agrestis HOM05D005746 ORTHO05D007105 2.0e-31 142.9 285 38.9
Phvul.004G028000 Phaseolus vulgaris HOM05D005746 ORTHO05D007105 6.6e-30 137.9 284 35.2
SEGI_38380 Sequoiadendron giganteum HOM05D005746 ORTHO05D007105 1.1e-29 137.1 252 36.9
TPR.G10375 Trifolium pratense HOM05D005746 ORTHO05D007105 2.5e-29 136.0 284 35.2
Lalb_Chr06g0175391 Lupinus albus HOM05D005746 ORTHO05D007105 3.3e-29 135.6 252 36.1
VMungo0464G0495 Vigna mungo HOM05D005746 ORTHO05D007105 3.3e-29 135.6 284 34.5
MELO3C009878.2 Cucumis melo HOM05D005746 ORTHO05D007105 5.6e-29 134.8 252 35.7
Glyma.19G021700 Glycine max HOM05D005746 ORTHO05D007105 5.6e-29 134.8 284 35.6
Mapoly0207s0007 Marchantia polymorpha HOM05D005746 ORTHO05D007105 5.6e-29 134.8 252 37.3
SMO367G0809 Selaginella moellendorffii HOM05D005746 ORTHO05D007105 9.5e-29 134.0 262 36.3
Ca_04277_v3 Cicer arietinum L. HOM05D005746 ORTHO05D007105 2.1e-28 132.9 264 35.6
Psat1g074560 Pisum sativum HOM05D005746 ORTHO05D007105 2.1e-28 132.9 284 34.2
CsaV3_3G041530 Cucumis sativus L. HOM05D005746 ORTHO05D007105 2.8e-28 132.5 252 35.3
Lj2g0006836 Lotus japonicus HOM05D005746 ORTHO05D007105 2.8e-28 132.5 252 36.1
Medtr6g011760 Medicago truncatula HOM05D005746 ORTHO05D007105 2.8e-28 132.5 284 34.5
ClCG10G014980 Citrullus lanatus HOM05D005746 ORTHO05D007105 4.7e-28 131.7 253 36.0
MBI05_g35450_MAGBIO Magnolia biondii HOM05D005746 ORTHO05D007105 4.7e-28 131.7 270 35.9
arahy.Tifrunner.gnm1.ann1.IK9RDG Arachis hypogaea HOM05D005746 ORTHO05D007105 8.0e-28 131.0 288 35.1
arahy.Tifrunner.gnm1.ann1.C4FZ3V Arachis hypogaea HOM05D005746 ORTHO05D007105 1.0e-27 130.6 288 35.1
Lju41C18T12 Lonicera japonica HOM05D005746 ORTHO05D007105 1.0e-27 130.6 252 35.3
Dinv33748 Davidia involucrata HOM05D005746 ORTHO05D007105 1.4e-27 130.2 255 36.5
Lsat_1_v5_gn_3_100801 Lactuca sativa HOM05D005746 ORTHO05D007105 1.8e-27 129.8 253 35.2
CBR_g50021 Chara braunii HOM05D005746 ORTHO05D007105 2.3e-27 129.4 259 34.4
Rhsim10G0040100 Rhododendron simsii HOM05D005746 ORTHO05D007105 2.3e-27 129.4 289 33.9
Pp3c6_28730 Physcomitrium patens HOM05D005746 ORTHO05D007105 3.1e-27 129.0 253 36.8
PGR083G2853 Punica granatum HOM05D005746 ORTHO05D007105 4.0e-27 128.6 247 35.6
MD09G1049900 Malus domestica HOM05D005746 ORTHO05D007105 5.2e-27 128.3 255 36.1
Sabra04G0090500 Salix brachista HOM05D005746 ORTHO05D007105 5.2e-27 128.3 262 35.5
Gohir.A09G017100 Gossypium hirsutum HOM05D005746 ORTHO05D007105 6.8e-27 127.9 288 34.0
Sed0005323 Sechium edule HOM05D005746 ORTHO05D007105 6.8e-27 127.9 258 34.5
Eucgr.J01361 Eucalyptus grandis HOM05D005746 ORTHO05D007105 8.9e-27 127.5 236 36.9
QL02p081653 Quercus lobata HOM05D005746 ORTHO05D007105 8.9e-27 127.5 287 34.5
vmacro05746 Vaccinium macrocarpon HOM05D005746 ORTHO05D007105 8.9e-27 127.5 289 33.2
ATR0564G261 Amborella trichopoda HOM05D005746 ORTHO05D007105 1.2e-26 127.1 252 36.1
vmacro05704 Vaccinium macrocarpon HOM05D005746 ORTHO05D007105 1.5e-26 126.7 289 33.2
Prupe.3G268800 Prunus persica HOM05D005746 ORTHO05D007105 2.0e-26 126.3 253 35.6
RcHm_v2.0_Chr2g0168711 Rosa chinensis HOM05D005746 ORTHO05D007105 2.6e-26 125.9 252 35.3
GSVIVG01011388001 Vitis vinifera HOM05D005746 ORTHO05D007105 3.4e-26 125.6 252 35.3
Migut.H00912 Erythranthe guttata HOM05D005746 ORTHO05D007105 4.4e-26 125.2 253 36.0
THA.LOC104823176 Tarenaya hassleriana HOM05D005746 ORTHO05D007105 4.4e-26 125.2 252 34.9
Carub.0005s2180 Capsella rubella HOM05D005746 ORTHO05D007105 5.8e-26 124.8 252 34.1
FAN02G0556 Fragaria x ananassa HOM05D005746 ORTHO05D007105 5.8e-26 124.8 252 35.7
MD17G1050300 Malus domestica HOM05D005746 ORTHO05D007105 5.8e-26 124.8 253 35.2
FvH4_6g48870 Fragaria vesca HOM05D005746 ORTHO05D007105 7.5e-26 124.4 252 35.3
ECA246G0262 Erigeron canadensis HOM05D005746 ORTHO05D007105 9.8e-26 124.0 253 34.8
MCO11G207 Micromonas commoda HOM05D005746 ORTHO05D007105 9.8e-26 124.0 286 33.9
Hund15611 Selenicereus undatus HOM05D005746 ORTHO05D007105 9.8e-26 124.0 258 32.9
EL10Ac2g02971 Beta vulgaris HOM05D005746 ORTHO05D007105 1.3e-25 123.6 290 32.1
CiPaw.03G027900 Carya illinoinensis HOM05D005746 ORTHO05D007105 1.3e-25 123.6 253 35.2
DCAR_021658 Daucus carota HOM05D005746 ORTHO05D007105 1.3e-25 123.6 252 33.3
TAR374G0083 Trochodendron aralioides HOM05D005746 ORTHO05D007105 1.3e-25 123.6 252 34.9
vmacro05484 Vaccinium macrocarpon HOM05D005746 ORTHO05D007105 1.3e-25 123.6 289 32.9
vmacro22549 Vaccinium macrocarpon HOM05D005746 ORTHO05D007105 1.3e-25 123.6 289 32.9
Cc07_g03290 Coffea canephora HOM05D005746 ORTHO05D007105 2.2e-25 122.9 285 31.6
CARHR165190 Cardamine hirsuta HOM05D005746 ORTHO05D007105 2.9e-25 122.5 252 33.7
Aa31LG2G4330 Aethionema arabicum HOM05D005746 ORTHO05D007105 3.7e-25 122.1 253 34.4
vmacro17103 Vaccinium macrocarpon HOM05D005746 ORTHO05D007105 3.7e-25 122.1 289 32.5
AL5G36280 Arabidopsis lyrata HOM05D005746 ORTHO05D007105 4.9e-25 121.7 253 34.0
AT3G55160 Arabidopsis thaliana HOM05D005746 ORTHO05D007105 4.9e-25 121.7 253 34.0
Cfa007537 Carpinus fangiana HOM05D005746 ORTHO05D007105 4.9e-25 121.7 253 34.4
Gohir.D09G015800 Gossypium hirsutum HOM05D005746 ORTHO05D007105 4.9e-25 121.7 289 33.9
Sopen03g014980 Solanum pennellii HOM05D005746 ORTHO05D007105 4.9e-25 121.7 285 33.0
TWI34G0228 Tripterygium wilfordii HOM05D005746 ORTHO05D007105 4.9e-25 121.7 289 33.2
Atru.chr8.140 Acer truncatum HOM05D005746 ORTHO05D007105 6.4e-25 121.3 253 34.8
Actinidia06086 Actinidia chinensis HOM05D005746 ORTHO05D007105 6.4e-25 121.3 252 34.9
MSTRG.3234 Avicennia marina HOM05D005746 ORTHO05D007105 6.4e-25 121.3 249 34.9
Duzib147G0034 Durio zibethinus HOM05D005746 ORTHO05D007105 6.4e-25 121.3 252 34.1
Aqoxy3G00678 Aquilegia oxysepala HOM05D005746 ORTHO05D007105 8.3e-25 120.9 252 35.7
Haze_14549 Corylus avellana HOM05D005746 ORTHO05D007105 8.3e-25 120.9 253 34.0
BcaC06g33649 Brassica carinata HOM05D005746 ORTHO05D007105 1.1e-24 120.6 253 33.6
C07p37790 Brassica napus HOM05D005746 ORTHO05D007105 1.1e-24 120.6 253 33.6
BolC7t44300H Brassica oleracea HOM05D005746 ORTHO05D007105 1.1e-24 120.6 253 33.6
Nn4g23132 Nelumbo nucifera HOM05D005746 ORTHO05D007105 1.1e-24 120.6 263 33.5
PSO017G1620 Papaver somniferum HOM05D005746 ORTHO05D007105 1.1e-24 120.6 285 33.3
Thecc.04G080100 Theobroma cacao HOM05D005746 ORTHO05D007105 1.1e-24 120.6 285 33.0
HPP92_011243 Vanilla planifolia HOM05D005746 ORTHO05D007105 1.1e-24 120.6 282 31.2
Thhalv10003503m.g Eutrema salsugineum HOM05D005746 ORTHO05D007105 1.4e-24 120.2 253 34.0
A06p40280 Brassica napus HOM05D005746 ORTHO05D007105 1.9e-24 119.8 253 33.6
BraA06t26946Z Brassica rapa HOM05D005746 ORTHO05D007105 1.9e-24 119.8 253 33.6
AUR62039819 Chenopodium quinoa HOM05D005746 ORTHO05D007105 1.9e-24 119.8 293 32.8
Peaxi162Scf00451g00821 Petunia axillaris HOM05D005746 ORTHO05D007105 1.9e-24 119.8 285 32.6
Ciclev10010889m.g Citrus clementina HOM05D005746 ORTHO05D007105 2.4e-24 119.4 244 36.1
Gorai.006G018000 Gossypium raimondii HOM05D005746 ORTHO05D007105 4.1e-24 118.6 289 33.6
HanXRQChr14g0439111 Helianthus annuus HOM05D005746 ORTHO05D007105 4.1e-24 118.6 253 34.0
Manes.15G175000 Manihot esculenta HOM05D005746 ORTHO05D007105 4.1e-24 118.6 261 33.3
SGA_v2.0_scaffold1G00328 Striga asiatica HOM05D005746 ORTHO05D007105 5.4e-24 118.2 252 32.5
Zm00001eb414960 Zea mays HOM05D005746 ORTHO05D007105 5.4e-24 118.2 255 34.1
CAN.G1205.1 Capsicum annuum HOM05D005746 ORTHO05D007105 7.0e-24 117.9 284 31.3
COL.COLO4_33291 Corchorus olitorius HOM05D005746 ORTHO05D007105 7.0e-24 117.9 289 33.2
unitig_0.g531 Utricularia gibba HOM05D005746 ORTHO05D007105 7.0e-24 117.9 285 31.2
AUR62034394 Chenopodium quinoa HOM05D005746 ORTHO05D007105 9.2e-24 117.5 293 31.7
Solyc03g062650.3 Solanum lycopersicum HOM05D005746 ORTHO05D007105 9.2e-24 117.5 253 34.0
CSS0009890 Camellia sinensis var. sinensis HOM05D005746 ORTHO05D007105 1.6e-23 116.7 254 33.5
CSS0043134 Camellia sinensis var. sinensis HOM05D005746 ORTHO05D007105 1.6e-23 116.7 254 33.5
Os08g0169700 Oryza sativa ssp. japonica HOM05D005746 ORTHO05D007105 1.6e-23 116.7 255 34.5
Potri.004G128601 Populus trichocarpa HOM05D005746 ORTHO05D007105 1.6e-23 116.7 288 32.6
Nitab4.5_0002923g0020 Nicotiana tabacum HOM05D005746 ORTHO05D007105 2.0e-23 116.3 252 33.7
Sc14g0005950 Simmondsia chinensis HOM05D005746 ORTHO05D007105 2.7e-23 115.9 259 32.4
Sp2g17500 Schrenkiella parvula HOM05D005746 ORTHO05D007105 3.5e-23 115.5 253 32.4
FAN09G1953 Fragaria x ananassa HOM05D005746 ORTHO05D007105 3.3e-21 109.0 279 31.9
Oeu060938.1 Olea europaea HOM05D005746 ORTHO05D007105 5.6e-21 108.2 309 29.4
Cpa.g.sc14.10 Carica papaya HOM05D005746 ORTHO05D007105 4.4e-18 98.6 86 55.8
CDE09G0909 Ceratophyllum demersum HOM05D005746 ORTHO05D007105 3.2e-16 92.4 85 54.1
BcaNung05131 Brassica carinata HOM05D005746 ORTHO05D007105 1.5e-13 83.6 218 30.3
CARHR159400 Cardamine hirsuta HOM05D005746 ORTHO05D007105 3.4e-10 72.4 151 33.8
BcaC06g33650 Brassica carinata HOM05D005746 ORTHO05D007105 4.4e-10 72.0 83 44.6
Lj2g0022018 Lotus japonicus HOM05D005746 ORTHO05D007105 3.9e-06 58.9 52 57.7


User provided reference genes

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