Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Cre14.g611950 Chlamydomonas reinhardtii HOM05D007126 ORTHO05D008974 0.0e+00 1083.9 629 100.0
Mapoly0029s0043 Marchantia polymorpha HOM05D007126 ORTHO05D008974 4.1e-71 273.5 657 35.2
Pp3c15_17220 Physcomitrium patens HOM05D007126 ORTHO05D008974 6.2e-67 259.6 619 34.1
BraA09t37117Z Brassica rapa HOM05D007126 ORTHO05D008974 3.7e-64 250.4 550 35.3
BcaB07g31464 Brassica carinata HOM05D007126 ORTHO05D008974 1.4e-63 248.4 549 34.2
BolC9t54678H Brassica oleracea HOM05D007126 ORTHO05D008974 4.1e-63 246.9 550 34.4
A09p14710 Brassica napus HOM05D007126 ORTHO05D008974 7.0e-63 246.1 549 34.2
Sp2g00310 Schrenkiella parvula HOM05D007126 ORTHO05D008974 1.6e-62 245.0 568 33.6
SMO367G1126 Selaginella moellendorffii HOM05D007126 ORTHO05D008974 2.1e-62 244.6 534 34.1
BcaC04g22569 Brassica carinata HOM05D007126 ORTHO05D008974 2.7e-62 244.2 550 34.2
AT1G64430 Arabidopsis thaliana HOM05D007126 ORTHO05D008974 1.3e-61 241.9 556 34.9
Thhalv10023389m.g Eutrema salsugineum HOM05D007126 ORTHO05D008974 2.3e-61 241.1 551 34.5
Gohir.A12G236900 Gossypium hirsutum HOM05D007126 ORTHO05D008974 3.0e-61 240.7 538 34.2
CARHR046500 Cardamine hirsuta HOM05D007126 ORTHO05D008974 6.6e-61 239.6 560 33.8
Aqoxy5G04057_Aqoxy5G04058 Aquilegia oxysepala HOM05D007126 ORTHO05D008974 1.1e-60 238.8 532 32.3
Gohir.D12G238100 Gossypium hirsutum HOM05D007126 ORTHO05D008974 1.1e-60 238.8 537 33.3
Gorai.008G255000 Gossypium raimondii HOM05D007126 ORTHO05D008974 1.1e-60 238.8 537 33.3
Thecc.03G299000 Theobroma cacao HOM05D007126 ORTHO05D008974 1.5e-60 238.4 541 32.7
Sc22g0004970 Simmondsia chinensis HOM05D007126 ORTHO05D008974 1.9e-60 238.0 559 34.7
Migut.A00631 Erythranthe guttata HOM05D007126 ORTHO05D008974 2.5e-60 237.7 550 32.9
AL2G10420 Arabidopsis lyrata HOM05D007126 ORTHO05D008974 5.6e-60 236.5 560 34.5
Nitab4.5_0000726g0050 Nicotiana tabacum HOM05D007126 ORTHO05D008974 5.6e-60 236.5 533 34.1
Aa31LG2G1430 Aethionema arabicum HOM05D007126 ORTHO05D008974 7.3e-60 236.1 561 34.4
Actinidia22167 Actinidia chinensis HOM05D007126 ORTHO05D008974 9.5e-60 235.7 534 33.5
ATR0598G096 Amborella trichopoda HOM05D007126 ORTHO05D008974 2.1e-59 234.6 573 32.3
arahy.Tifrunner.gnm1.ann1.U3A0V6 Arachis hypogaea HOM05D007126 ORTHO05D008974 8.1e-59 232.6 492 35.8
CSS0001738 Camellia sinensis var. sinensis HOM05D007126 ORTHO05D008974 8.1e-59 232.6 533 33.6
CiPaw.11G120500 Carya illinoinensis HOM05D007126 ORTHO05D008974 8.1e-59 232.6 555 34.4
Duzib205G0473 Durio zibethinus HOM05D007126 ORTHO05D008974 8.1e-59 232.6 499 33.9
THA.LOC104817626 Tarenaya hassleriana HOM05D007126 ORTHO05D008974 8.1e-59 232.6 578 34.3
Lj4g0010714 Lotus japonicus HOM05D007126 ORTHO05D008974 1.1e-58 232.3 559 34.3
CAN.G390.5 Capsicum annuum HOM05D007126 ORTHO05D008974 1.4e-58 231.9 533 33.8
Hma1.2p1_0440F.1_g153370 Hydrangea macrophylla HOM05D007126 ORTHO05D008974 2.3e-58 231.1 531 33.3
Lalb_Chr09g0332411 Lupinus albus HOM05D007126 ORTHO05D008974 4.0e-58 230.3 541 33.8
CSS0007498 Camellia sinensis var. sinensis HOM05D007126 ORTHO05D008974 5.2e-58 229.9 533 33.2
Glyma.08G023000 Glycine max HOM05D007126 ORTHO05D008974 8.9e-58 229.2 556 33.6
Sopen12g024410 Solanum pennellii HOM05D007126 ORTHO05D008974 1.2e-57 228.8 498 34.5
VMungo0251G2926 Vigna mungo HOM05D007126 ORTHO05D008974 2.6e-57 227.6 530 33.6
Eucgr.D01749 Eucalyptus grandis HOM05D007126 ORTHO05D008974 3.4e-57 227.3 565 32.6
Manes.01G047820 Manihot esculenta HOM05D007126 ORTHO05D008974 5.8e-57 226.5 530 32.6
CBR_g19104 Chara braunii HOM05D007126 ORTHO05D008974 3.7e-56 223.8 542 33.2
TWI15G1063 Tripterygium wilfordii HOM05D007126 ORTHO05D008974 6.4e-56 223.0 557 32.9
HanXRQChr17g0534861 Helianthus annuus HOM05D007126 ORTHO05D008974 8.3e-56 222.6 556 31.5
PGR031G2002 Punica granatum HOM05D007126 ORTHO05D008974 8.3e-56 222.6 568 33.5
AUR62010848 Chenopodium quinoa HOM05D007126 ORTHO05D008974 1.1e-55 222.2 511 34.2
PGSC0003DMG400004995 Solanum tuberosum HOM05D007126 ORTHO05D008974 1.1e-55 222.2 553 32.5
Medtr8g099525 Medicago truncatula HOM05D007126 ORTHO05D008974 1.4e-55 221.9 553 32.7
Sed0013130 Sechium edule HOM05D007126 ORTHO05D008974 2.4e-55 221.1 563 32.5
Solyc12g055940.3 Solanum lycopersicum HOM05D007126 ORTHO05D008974 2.4e-55 221.1 551 32.5
GSVIVG01019542001 Vitis vinifera HOM05D007126 ORTHO05D008974 3.2e-55 220.7 567 32.5
Potri.003G140800 Populus trichocarpa HOM05D007126 ORTHO05D008974 4.1e-55 220.3 528 33.7
Ciclev10019342m.g Citrus clementina HOM05D007126 ORTHO05D008974 9.2e-55 219.2 567 31.9
Potri.001G090800 Populus trichocarpa HOM05D007126 ORTHO05D008974 1.6e-54 218.4 553 32.9
CANSAT21G1075 Cannabis sativa HOM05D007126 ORTHO05D008974 2.7e-54 217.6 532 32.0
arahy.Tifrunner.gnm1.ann1.GEY0M8 Arachis hypogaea HOM05D007126 ORTHO05D008974 3.5e-54 217.2 513 33.9
C09p17800 Brassica napus HOM05D007126 ORTHO05D008974 3.5e-54 217.2 536 32.8
Nitab4.5_0004010g0090 Nicotiana tabacum HOM05D007126 ORTHO05D008974 3.5e-54 217.2 454 35.0
Prupe.5G121000 Prunus persica HOM05D007126 ORTHO05D008974 4.6e-54 216.9 553 32.7
Sabra01G0067000 Salix brachista HOM05D007126 ORTHO05D008974 6.0e-54 216.5 458 35.2
CsaV3_4G006650 Cucumis sativus L. HOM05D007126 ORTHO05D008974 1.3e-53 215.3 555 31.7
PSO063G3961 Papaver somniferum HOM05D007126 ORTHO05D008974 1.3e-53 215.3 527 31.3
Atru.chr9.1971 Acer truncatum HOM05D007126 ORTHO05D008974 2.3e-53 214.5 578 32.4
Atru.chr9.1985 Acer truncatum HOM05D007126 ORTHO05D008974 2.3e-53 214.5 578 32.4
AUR62019847 Chenopodium quinoa HOM05D007126 ORTHO05D008974 2.3e-53 214.5 550 32.4
MD06G1108400 Malus domestica HOM05D007126 ORTHO05D008974 3.9e-53 213.8 554 32.1
ECA246G3461 Erigeron canadensis HOM05D007126 ORTHO05D008974 8.6e-53 212.6 556 31.1
Hund11386 Selenicereus undatus HOM05D007126 ORTHO05D008974 8.6e-53 212.6 589 34.8
QL02p030251 Quercus lobata HOM05D007126 ORTHO05D008974 1.9e-52 211.5 526 32.5
RcHm_v2.0_Chr7g0194681 Rosa chinensis HOM05D007126 ORTHO05D008974 3.3e-52 210.7 551 31.8
MBI06_g08479_MAGBIO Magnolia biondii HOM05D007126 ORTHO05D008974 4.3e-52 210.3 546 32.2
Lsat_1_v5_gn_3_10920 Lactuca sativa HOM05D007126 ORTHO05D008974 3.6e-51 207.2 531 31.3
HPP92_007857 Vanilla planifolia HOM05D007126 ORTHO05D008974 4.7e-51 206.8 533 31.3
TPR.G3456 Trifolium pratense HOM05D007126 ORTHO05D008974 1.8e-50 204.9 562 31.9
ClCG07G011560 Citrullus lanatus HOM05D007126 ORTHO05D008974 4.0e-50 203.8 552 31.5
Oeu009966.1 Olea europaea HOM05D007126 ORTHO05D008974 5.2e-50 203.4 524 31.5
EL10Ac5g12922 Beta vulgaris HOM05D007126 ORTHO05D008974 5.8e-49 199.9 537 32.4
Cc08_g16150 Coffea canephora HOM05D007126 ORTHO05D008974 2.9e-48 197.6 539 31.9
DCAR_029908 Daucus carota HOM05D007126 ORTHO05D008974 9.2e-47 192.6 500 31.0
TAR374G0215 Trochodendron aralioides HOM05D007126 ORTHO05D008974 7.8e-46 189.5 348 38.5
Phvul.002G298304 Phaseolus vulgaris HOM05D007126 ORTHO05D008974 1.7e-45 188.3 345 36.8
Nn1g08439 Nelumbo nucifera HOM05D007126 ORTHO05D008974 3.9e-45 187.2 531 30.7
Haze_09075 Corylus avellana HOM05D007126 ORTHO05D008974 5.1e-45 186.8 608 29.4
Rhsim02G0244700 Rhododendron simsii HOM05D007126 ORTHO05D008974 5.6e-44 183.3 530 30.8
Zm00001eb028190 Zea mays HOM05D007126 ORTHO05D008974 8.1e-43 179.5 565 29.4
FvH4_5g04720 Fragaria vesca HOM05D007126 ORTHO05D008974 1.4e-42 178.7 525 30.1
SGA_v2.0_scaffold305G47987 Striga asiatica HOM05D007126 ORTHO05D008974 4.0e-42 177.2 591 31.3
MELO3C016299.2 Cucumis melo HOM05D007126 ORTHO05D008974 2.6e-41 174.5 518 30.5
Psat7g210120 Pisum sativum HOM05D007126 ORTHO05D008974 7.6e-41 172.9 402 34.6
Lj2C166T10 Lonicera japonica HOM05D007126 ORTHO05D008974 1.4e-39 168.7 572 30.8
unitig_37.g12131 Utricularia gibba HOM05D007126 ORTHO05D008974 6.0e-38 163.3 541 28.7
Peaxi162Scf00117g01130 Petunia axillaris HOM05D007126 ORTHO05D008974 3.0e-37 161.0 526 30.2
SalBow1G1535 Salvia bowleyana HOM05D007126 ORTHO05D008974 1.9e-36 158.3 564 29.3
Cpa.g.sc79.28 Carica papaya HOM05D007126 ORTHO05D008974 2.1e-35 154.8 401 32.2
Dinv38826 Davidia involucrata HOM05D007126 ORTHO05D008974 1.1e-34 152.5 501 29.5
Carub.0002s0034 Capsella rubella HOM05D007126 ORTHO05D008974 1.3e-32 145.6 268 38.4
CDE08G1056 Ceratophyllum demersum HOM05D007126 ORTHO05D008974 1.7e-32 145.2 345 32.5
Hma1.2p1_0440F.1_g153360 Hydrangea macrophylla HOM05D007126 ORTHO05D008974 4.2e-31 140.6 552 28.4
vmacro11349 Vaccinium macrocarpon HOM05D007126 ORTHO05D008974 3.5e-30 137.5 461 28.6
SEGI_23531 Sequoiadendron giganteum HOM05D007126 ORTHO05D008974 1.2e-25 122.5 198 37.4
CDE08G0877 Ceratophyllum demersum HOM05D007126 ORTHO05D008974 1.1e-15 89.4 177 33.9
SEGI_34352 Sequoiadendron giganteum HOM05D007126 ORTHO05D008974 5.5e-15 87.0 93 50.5
Os08g0332700 Oryza sativa ssp. japonica HOM05D007126 ORTHO05D008974 1.4e-10 72.4 192 30.7
SEGI_08908 Sequoiadendron giganteum HOM05D007126 ORTHO05D008974 7.7e-09 66.6 182 31.9
Cpa.g.sc79.27 Carica papaya HOM05D007126 ORTHO05D008974 2.1e-06 58.5 71 46.5
Carub.0002s0035 Capsella rubella HOM05D007126 ORTHO05D008974 6.1e-06 57.0 204 28.9


User provided reference genes

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